miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTCCACTGAAATTATTGTTGG
species: Pinus taeda
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|67551826|gb|DR092853.1|DR092853 STRR1_4_A08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_4_A08_A033 5', mRNA

TTCCACTGAAATTATTGTTGG
|||||||| ||||| ||.|||
AAGGTGACCTTAATTACGACC

EST sequence (targeted fragment marked with yellow):
CGTTGGCTGCCATCAAGGAACAGCTTTCCATGTTCTCAAGGGGAACGATGATAGAAGAGGTGTCAAGACAGATTTCTCGATGGGTTTACACATACTGAGCGTCGGTTGCATCAGATGATGTTTGCGGACAGGGACTATGAGGGTCCTGATACCAGGTCATTGGGAGAAAATGGGAGGCCTATGATCAAAATAGAGAACTGCAATGAAAAGGGTTACTCTGTAGTTAATGTGCACTGTAAAGATAGGCCAAAGCTTCTTTTTGATACTGTCTGCACACTGACAGACATGCAATATGTGGTCTTTCATGCCAGCATTAATTCCAGTGGAACCTATGCATTACAGGAATATTACATTCGTCATATGGATGGTTGTACTCTGGACACGGAAGGTGAGAAACAAAGAGTAATCAAGTGTTTAGAGGCTGCAATAGAAAGAAGAGTATCAGAGGGACTTCGTCTTGAACTCTGCACGAGTGACCGAGTTGGCCTGCTTTCTGATATTACACGCATTTTCCGCGAGAATGGTCTGTCTGTTACCAGAGCAGATGTTACAACACGAGGGGATAAAGCTGTAAATGTGTTCTATGTCACAGATATATCGGGAAATCCTGTGGACATGAAGATTGTTGAAGCTATGAGAAGAGAAATTGGCCATACAATTCTGCAAGTGAAAAGTATGCCTTGTCCTAGACGTTGTCCAACAGACACTGGAGATAAGGCCAAGTTCTCATTTGGCAGCTTACTAAAATCCCAGATAGAGCGTTTATCTTATAACTTTGGTCTAATCAAGTCCTAAAAGGCTAAATCTAATAGAAACAGTGTTTCATCTGTTTACTCATTTTTGAAGGCAAGTGCCTATCCTTCTGTAAAAGTGGCTTATCTTG



gi|74163904|gb|DT633835.1|DT633835 EST1148766 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFZ27 3' end, mRNA

TTCCACTGAAATTATTGTTGG
||||||||||||.||| ..|.
AAGGTGACTTTAGTAAGGGCT

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCTTTGAAAGAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCCTTCAATGGACGCAATATGACGGGGGAACCCTCTTCCTCCATGCCCGATAAAAGGGACTTGGAGGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACAGAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGTTTCAATTTCTCTCCCTGGCTATTGCGGATTGAATGGTACGCTATCCCCGTCTATTGGCAACCTCTCTCTGTTGGGGACTTTAGATCTTTCCGAGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAAACTCTCTCTGTTGCGGACTTTAGATCTTTTCGGGAATGATTTCAGTGGAAGAATTCCACCGTCTATTCGCAACCTCTCTCTGTTGCGGACTTTAGTTCTTTCCCTGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGATAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTTTCTGTTGCGGATTTTAGATCTTTCCTGGAATGATTTCAGTGGAAGAATCCCACCAGAACTCGGCCGTCTGGTCCAGTTGGAATCT



gi|74163904|gb|DT633835.1|DT633835 EST1148766 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFZ27 3' end, mRNA

TTCCACTGAAATTATTGTTGG
||||||||||||.||| . ||
AAGGTGACTTTAGTAAGGTCC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCTTTGAAAGAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCCTTCAATGGACGCAATATGACGGGGGAACCCTCTTCCTCCATGCCCGATAAAAGGGACTTGGAGGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACAGAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGTTTCAATTTCTCTCCCTGGCTATTGCGGATTGAATGGTACGCTATCCCCGTCTATTGGCAACCTCTCTCTGTTGGGGACTTTAGATCTTTCCGAGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAAACTCTCTCTGTTGCGGACTTTAGATCTTTTCGGGAATGATTTCAGTGGAAGAATTCCACCGTCTATTCGCAACCTCTCTCTGTTGCGGACTTTAGTTCTTTCCCTGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGATAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTTTCTGTTGCGGATTTTAGATCTTTCCTGGAATGATTTCAGTGGAAGAATCCCACCAGAACTCGGCCGTCTGGTCCAGTTGGAATCT



gi|67191174|gb|DR078860.1|DR078860 RTFEPL1_7_G02.b1_A029 Roots plus added iron Pinus taeda cDNA clone RTFEPL1_7_G02_A029 3', mRN

TTCCACTGAAATTATTGTTGG
||||||||||| |||| |||
TAGGTGACTTTACTAACTACC

EST sequence (targeted fragment marked with yellow):
AATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCTTTCAATGGACGCAATATCACGGGGGAACCCTCTTCCTCCATGCCCCATAAAAGGGACTTGGACGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGCTGCAGTTATACTCGTTGGCTGCGGATTGAATGGTACGCTATCCCCCTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTATTCCATCAATCATTTCAGTGGATTATTTTCCTGGAATTATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACCGTTTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTGGAATGGTTTCAGTGGAAGAATTCCACCGTTTATAGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCCGGAATCATTTCAGTGGAAGAATCCCACCAGAATTCGGCCGTCTGGTCCAGTTGGAATCTCTCGGGTTGAAAGGTATAGATCTGAATGCAAGCATCCCAACTTTTCTGGGCAACTGCACTTCACTTACAGAACTGGATATTAGCGGCAACAATTTGAGTGGTCCAATACC



gi|67191174|gb|DR078860.1|DR078860 RTFEPL1_7_G02.b1_A029 Roots plus added iron Pinus taeda cDNA clone RTFEPL1_7_G02_A029 3', mRN

TTCCACTGAAATTATTGTTGG
|||||||||||| ||| . ||
AAGGTGACTTTATTAAGGTCC

EST sequence (targeted fragment marked with yellow):
AATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCTTTCAATGGACGCAATATCACGGGGGAACCCTCTTCCTCCATGCCCCATAAAAGGGACTTGGACGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGCTGCAGTTATACTCGTTGGCTGCGGATTGAATGGTACGCTATCCCCCTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTATTCCATCAATCATTTCAGTGGATTATTTTCCTGGAATTATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACCGTTTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTGGAATGGTTTCAGTGGAAGAATTCCACCGTTTATAGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCCGGAATCATTTCAGTGGAAGAATCCCACCAGAATTCGGCCGTCTGGTCCAGTTGGAATCTCTCGGGTTGAAAGGTATAGATCTGAATGCAAGCATCCCAACTTTTCTGGGCAACTGCACTTCACTTACAGAACTGGATATTAGCGGCAACAATTTGAGTGGTCCAATACC



gi|13919451|gb|BG673798.1|BG673798 NXPV_075_B11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_075_B11 5'

TTCCACTGAAATTATTGTTGG
|||||||||||| ||| ..||
AAGGTGACTTTACTAAGGGCC

EST sequence (targeted fragment marked with yellow):
GATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACAGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTACAATCATTTCAGTGGAAGAATTCCACCATCTATTGGCAACCTCTCTCTGTTGTGGACTTTAGATCTTTCCTTTAATAATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGTGGACTTTAGATCTTTCCTGGAATGGTATAAGGGGAAGCATTCCATCTTCGATTAGCAACTGCACTTCACTCCAATACTTATCAGGTACGGAAAACAAATTGAGTGGTCCAATCCCTTCAGTAATCGGTTTGATGAAAAGCATATCATATATTGATTTATCCGACAACTCACTAAGTGGCAACATCCCTCCCACGCTATTCAATTGTTCTCCGCTATATTCCTTGGACCTAGACAATAATGACCTTATNNNNNACANNNCGAGTANNNNNGACGCCAATATGTCATTGCAGTATCTTTCTTTATCAAACAACCATTTAATTG



gi|67048712|gb|DR070970.1|DR070970 RTDK1_16_F05.g1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_16_F05_A029 5', mRNA sequence

TTCCACTGAAATTATTGTTGG
|||||||| |||| ||.|||
AAGGTGACCTTAAGAATAACG

EST sequence (targeted fragment marked with yellow):
AGGCTTGGCATCCTCCTGCGCCAATAACTCTGAAGTTAAATCCATACAAGAAGTCCATTAAATATCCAGGAATTACAGATACCCATATAAGCGCCATGATTGCAGCCAAGGTTGTCACAGCCATTGCATCGCTCTTTACAGTGGTAACCCTTGTCGGAATTATTCGGGGGTTCAGATCCAACAGAAGGAAGGATGAATCCCGCTCGGCTTCTAAGGCTTTTGAACTTTCCAACATCGAAGCGGAGAAAGTTAGGCAGAAGGACGAGTATGGAATGTTTCGTCGTCTGTTGAAGAGTAAATTTCAAAATTTGGTGGATCGACACTCAATTCTTCATACAACCATGGTAGAGCTAGCTCGGGTTTTGCGTTTGCAGGATTGTGTTATATGGATGCCCAGGGATAATCAACATCTTCTCCGTTTCGACCACTCCCTTGAGCCAGGAAAAAGCGACTACAATACTGTTCAATCTGTTATAAGTTTGCCTAACAAAACAGTTGAGATGGTTTTGAAGGAAAGTGGGGCAATAAGAATTCCAGTGGAATCCGAGCTAGCGAGATATAGTGGAGCCAGGACATCTACGAATTTTGTTGAGTTAGATTATGTTTTTGCCACGAGGCTCCCTGTTTTTGACCACTTGCTCTGAATTAATAGGTCACAAAGCTTCTCCTGTGTTCGCAATAAT



gi|49448430|gb|CO367113.1|CO367113 RTK1_32_F05.b1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_32_F05_A029 3', mRNA se

TTCCACTGAAATTATTGTTGG
|||||||||||| ||||.|..
AAGGTGACTTTA-TAACGATT

EST sequence (targeted fragment marked with yellow):
AAAAAATTACACTATTTTAAATTTTCTCTAAGATTGAATTAGTATCATGCATTATTCTTTGTGGACGACTGATCTTCAAGGAGACGAGGAAGCCCTGGAACACAACGTTTTGGCTTTCAAAGGAAACAGCAGGTCACTCCCTACCATTAACAACATTAACAGTAGAGTAAGAGTAGAACCTGATACAACTAGGAACTGGGAAAGCAAAATGAATAGAATTGCACACAATCCAGCCTTCACTATGATTGACTATTTTACTGTAAATCTCACAGCTTAAACGTTACTTTTTCATTCCTCCCAAGATAAAATTGGCTAGAACAAACCTCCTTGAGGTTAGCAATATTTCAGTGGAAACACAGATGAATTACATCAAATCAGATATGAAACACTGAATTTAGCCGCCTTACACACAGATGCTAGAAACAATGAGCACACTAAATGCTCTAATGACCTACTTGTCTCCAAACATGCCTCCAAAGTTTTTGCCACCCATCTGCTTCATTAAGTTCTGCAACCCTCCCATACCACCAATCTGCTTCAGCATTTGTGGAGGAACCTTGCTCATGTGCTGAGCGTTCATATTCCGAGATAATGCACTCATGTCACCCTTCTTGGGGATTTTAAGTCCCTTCATCTTACTCCAAATCTTGGCTAAGCGTTTAAACTCTTCTAGCATTTCCATTACTTCCCTAACAGGACGACCAGACCCACGTGCAACACGCAT



gi|74163904|gb|DT633835.1|DT633835 EST1148766 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFZ27 3' end, mRNA

TTCCACTGAAATTATTGTTGG
||||||||||||.||| ||
AAGGTGACTTTAGTAAGTCCC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCTTTGAAAGAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCCTTCAATGGACGCAATATGACGGGGGAACCCTCTTCCTCCATGCCCGATAAAAGGGACTTGGAGGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACAGAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGTTTCAATTTCTCTCCCTGGCTATTGCGGATTGAATGGTACGCTATCCCCGTCTATTGGCAACCTCTCTCTGTTGGGGACTTTAGATCTTTCCGAGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAAACTCTCTCTGTTGCGGACTTTAGATCTTTTCGGGAATGATTTCAGTGGAAGAATTCCACCGTCTATTCGCAACCTCTCTCTGTTGCGGACTTTAGTTCTTTCCCTGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGATAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTTTCTGTTGCGGATTTTAGATCTTTCCTGGAATGATTTCAGTGGAAGAATCCCACCAGAACTCGGCCGTCTGGTCCAGTTGGAATCT



gi|74158367|gb|DT628299.1|DT628299 EST1157048 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PIMCW47 5' end, mRNA

TTCCACTGAAATTATTGTTGG
.|||| ||||||.|||.|..|
GAGGTCACTTTAGTAATAGTC

EST sequence (targeted fragment marked with yellow):
ACAGTTTCATCCTTTGTTGGCAACCTCTCATCATTGCGCACATTCAATATTTCTTATAATGCTTTTACTGGTGGAATTCCTGCTGAGTTTGGCAAGCTCCATAATCTGCGCACCGTGGACCTTTCTTATAATTATTATTTCACTGGAGGAATTCTGGCCGAGTTTGGCAAGCTCCATAATCTGCGCACCGTGGATCTTTCTGATAATGATTTCACTGGAGGAATTCCGGCCGAGTTTGGTAAGCTCCATAATCTGCGCACTGTGGATCTTTCTGATAATGCTTTCACTGGAGGAATTCCGGCCGAGTTTGGCAAGCTCCATAATCTGCGCACCGTGGATCTTTCTGGTAATGCTTTCACTGGAGGAATTCCGGCCGAGTTTGGTAAGCTCCATAATCTGCGCACCGTGGATCTTTCTTTTAATAATTTCACTGGAGGAATTCCGGCCGAGTTTGGCAAGCTCCATAATCTGCGCACCGTGGATCTTTCTGGTAATGCTTTCACTGGAGGAATTCCGGCCGAGTTTGGTAAGCTCCATAATCTGCGCACTGTGGATCTTTCTTTTAATAATTTCACTGGAGGAATTCCGGCCGAGTTTGGCAAGCTCCATAATCTGCGCACCGTGGATCTTTCTGGCAATGCTTTCACTGGAATTCCTGCCGAGTTTGGCAAGCTCCATAACATGCGCACCGTGGATCTTTC



gi|66690538|gb|DR013032.1|DR013032 HEAT1_16_C05.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone HEAT1_16_C05_A029 5', mRNA

TTCCACTGAAATTATTGTTGG
|||||||||||||||||||||
AAGGTGACTTTAATAACAACC

EST sequence (targeted fragment marked with yellow):
TCGCCAGATGCCCATATGGAAGATCACCACGTCAAAACCTGGTGCTGTACGCACTGGTTCATTTCACAGCTTTCTTACCTTTAATATCGCTCACATCATCTCCATCTTTGGGATTTTCTTCCTGCACCGTCTGCACCCATGGGCTCGATTTTTGTTCCCACGCATCACAAAGCTAGTTTGTATTTTATTGGCAGATATCGAAGGACACTGGACTTGGTTTGAAGGACACTGAACTTGTATAAGAAATACATGGTTGCTTGATGTTTCTATGTAATAATGTCTTTCCTTTTTGGTTGCTCCTCTTCCCGGTGGTATTCTACCACTGAAATTATTGTTCGAAATAACACCTGCAATTCATGGATGTATACTGCCGTGGTATCGCCAGTCTAACCTAGTTGCAGGGTTGCAACACATGGCATGGTGGGGGATCTATTGGGCAATAACCAAGTTGCATGGGTGTATTTATCCAACAATAATTTCAGTGGAAGACTTCCATCGATCTGGAAGACTCATGGGGATTTCGAATCAGCAGGTTATGGCTATGTCATGTTCATCTTTTATATGTGTTGATTTTGTGTATTAAAATGGAAAAAGTTGAGTATTTTCTGAATTATGAGCTGGAAAAAGAAGGGTTCGGTTATTTGCGCATTGAAATGTC



gi|74166177|gb|DT636107.1|DT636107 EST1151038 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGO10 3' end, mRNA

TTCCACTGAAATTATTGTTGG
|||||||||||| ||| ..||
AAGGTGACTTTACTAAGGGCC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCCTTGAAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCTTTCAATGGACGCAATATCACGGGGGAACCCTCTTCCTCCATGCCCCATAAAAGGGACTTGGACGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGCTGCAGTTATACTCGTTGGCTGCGGATTGAATGGTACGCTATCCCCCTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTATTCCATCAATCATTTCAGTGGAAGAATTTCCTGGAATTATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACCGTTTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTGGAATGGTTTCAGTGGAAGAATTCCACCGTTTATAGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCCGGAATCATTTCAGTGGAAGAATCCCACCAGAATTCGGCCGTCTGGTCCAGTTGGAATCTCTCGGGTTGAAAGGTATAGATCTGAATGCAAGCATCCCAACTTTTCTGGGCAACTGCACTTCACTTACAGAACTGGATA



gi|74166177|gb|DT636107.1|DT636107 EST1151038 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGO10 3' end, mRNA

TTCCACTGAAATTATTGTTGG
|||||||||||| ||| . ||
AAGGTGACTTTATTAAGGTCC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCCTTGAAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCTTTCAATGGACGCAATATCACGGGGGAACCCTCTTCCTCCATGCCCCATAAAAGGGACTTGGACGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGCTGCAGTTATACTCGTTGGCTGCGGATTGAATGGTACGCTATCCCCCTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTATTCCATCAATCATTTCAGTGGAAGAATTTCCTGGAATTATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACCGTTTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTGGAATGGTTTCAGTGGAAGAATTCCACCGTTTATAGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCCGGAATCATTTCAGTGGAAGAATCCCACCAGAATTCGGCCGTCTGGTCCAGTTGGAATCTCTCGGGTTGAAAGGTATAGATCTGAATGCAAGCATCCCAACTTTTCTGGGCAACTGCACTTCACTTACAGAACTGGATA



gi|13919451|gb|BG673798.1|BG673798 NXPV_075_B11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_075_B11 5'

TTCCACTGAAATTATTGTTGG
||||||||||||||||. ||
AAGGTGACTTTAATAATTTCC

EST sequence (targeted fragment marked with yellow):
GATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACAGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTACAATCATTTCAGTGGAAGAATTCCACCATCTATTGGCAACCTCTCTCTGTTGTGGACTTTAGATCTTTCCTTTAATAATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGTGGACTTTAGATCTTTCCTGGAATGGTATAAGGGGAAGCATTCCATCTTCGATTAGCAACTGCACTTCACTCCAATACTTATCAGGTACGGAAAACAAATTGAGTGGTCCAATCCCTTCAGTAATCGGTTTGATGAAAAGCATATCATATATTGATTTATCCGACAACTCACTAAGTGGCAACATCCCTCCCACGCTATTCAATTGTTCTCCGCTATATTCCTTGGACCTAGACAATAATGACCTTATNNNNNACANNNCGAGTANNNNNGACGCCAATATGTCATTGCAGTATCTTTCTTTATCAAACAACCATTTAATTG



gi|34347672|gb|CF389255.1|CF389255 RTDR2_9_G08.g1_A021 Loblolly pine roots recovering from drought DR2 Pinus taeda cDNA clone RT

TTCCACTGAAATTATTGTTGG
|||| |||||| |||.||||.
AAGGAGACTTTCATAGCAACT

EST sequence (targeted fragment marked with yellow):
ATATTTAGAGCCGTTCTCAAAACCTTTCATATGATGTTCCGCACGAGTTCATTCCTTACAATCAGAACGGGCCAGAATTGCCGGGTTACTATGATGACCTAATCCATCAAGTCTCCTTAGCAAAGGAGTTCGATGCAGCTGTGGGGGATTTTACCATCCTTGCAAACCGCAGCATATATGTGGATTTCACTCAGCCCTATTTTGAATCAGGGCTGGTGATGGTAGTGCCAATAAAGGCAGCCAATCCGAGCAATGCTTGGACATTTGTCCTTCCTTTTACACGAGCCATGTGGGGTACAACCGGAGCATTCTTCGTCTTTACAGGATTAGTTGTTTGGCTGCTTGAACACAAGGTCAACGATACTTTCAGAGGAAAGCCCAAAGCACAAATTACAACCTTCCTATGGTTCTCATTTTCCACTCTCTTTTTCTCTCAGAGGGAAAACGTTGTCAGCAGTTTGGCTCGAGGAGTCATAATCATCTGGCTTTTCGTAGTTCTGATACTGCAATCTAGCTACACAGCAAATCTCACAGCAATCTTAACAGCAAAACAAATGCAGCCGACCATTGTAGACGTAGAGTCTCTGAAATCCAGCGGACTGTCAGTGGGTTACAACGCGGGATCTTTTATAGGCGAATACCTGGTAGAGCACCTAGGGATAGAGCGCAAGAAGCTAAAGGGATATGTATCACCACAAGAATATGCAAACGCGCTGTCAAACGGATCAGTGGCTGCCAT



gi|11068506|gb|BF186333.1|BF186333 NXCI_136_E03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_136_E03

TTCCACTGAAATTATTGTTGG
|||||| ||||| |||||||
AAGGTGTCTTTATTAACAACA

EST sequence (targeted fragment marked with yellow):
TACCAATTGCACTCACTCCGGATTATGGAGCACCTGTGGTGCGTTATGCTGATGGAGTGATAGATCTTCACTTAGNNNGTTATATCACTGTAAGAGAAGACCATCGGGAAAGTGATGCAAATCCAACCACAACAATTATTTCTGTGGAACTCAATGGGGTTGNNNAAACAGAGCCACATGTATTAGNCAGNGGCAGCGACT



gi|74166177|gb|DT636107.1|DT636107 EST1151038 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGO10 3' end, mRNA

TTCCACTGAAATTATTGTTGG
|||||||||||| ||| . ||
AAGGTGACTTTACTAAGGCCC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCCTTGAAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCTTTCAATGGACGCAATATCACGGGGGAACCCTCTTCCTCCATGCCCCATAAAAGGGACTTGGACGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGCTGCAGTTATACTCGTTGGCTGCGGATTGAATGGTACGCTATCCCCCTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTATTCCATCAATCATTTCAGTGGAAGAATTTCCTGGAATTATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACCGTTTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTGGAATGGTTTCAGTGGAAGAATTCCACCGTTTATAGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCCGGAATCATTTCAGTGGAAGAATCCCACCAGAATTCGGCCGTCTGGTCCAGTTGGAATCTCTCGGGTTGAAAGGTATAGATCTGAATGCAAGCATCCCAACTTTTCTGGGCAACTGCACTTCACTTACAGAACTGGATA



gi|74163904|gb|DT633835.1|DT633835 EST1148766 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFZ27 3' end, mRNA

TTCCACTGAAATTATTGTTGG
||||||||||||.|||.|.||
AAGGTGACTTTAGTAATAGCC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCTTTGAAAGAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCCTTCAATGGACGCAATATGACGGGGGAACCCTCTTCCTCCATGCCCGATAAAAGGGACTTGGAGGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACAGAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGTTTCAATTTCTCTCCCTGGCTATTGCGGATTGAATGGTACGCTATCCCCGTCTATTGGCAACCTCTCTCTGTTGGGGACTTTAGATCTTTCCGAGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAAACTCTCTCTGTTGCGGACTTTAGATCTTTTCGGGAATGATTTCAGTGGAAGAATTCCACCGTCTATTCGCAACCTCTCTCTGTTGCGGACTTTAGTTCTTTCCCTGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGATAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTTTCTGTTGCGGATTTTAGATCTTTCCTGGAATGATTTCAGTGGAAGAATCCCACCAGAACTCGGCCGTCTGGTCCAGTTGGAATCT



gi|74163904|gb|DT633835.1|DT633835 EST1148766 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFZ27 3' end, mRNA

TTCCACTGAAATTATTGTTGG
||||||||||||.||| |.||
AAGGTGACTTTAGTAAGAGCC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCTTTGAAAGAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCCTTCAATGGACGCAATATGACGGGGGAACCCTCTTCCTCCATGCCCGATAAAAGGGACTTGGAGGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACAGAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGTTTCAATTTCTCTCCCTGGCTATTGCGGATTGAATGGTACGCTATCCCCGTCTATTGGCAACCTCTCTCTGTTGGGGACTTTAGATCTTTCCGAGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAAACTCTCTCTGTTGCGGACTTTAGATCTTTTCGGGAATGATTTCAGTGGAAGAATTCCACCGTCTATTCGCAACCTCTCTCTGTTGCGGACTTTAGTTCTTTCCCTGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGATAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTTTCTGTTGCGGATTTTAGATCTTTCCTGGAATGATTTCAGTGGAAGAATCCCACCAGAACTCGGCCGTCTGGTCCAGTTGGAATCT



gi|17242288|gb|BM157520.1|BM157520 NXLV_020_D12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA clone NXLV_020_D12 5', mR

TTCCACTGAAATTATTGTTGG
||||| |||||..|||.||..
AAGGTAACTTTGGTAATAATT

EST sequence (targeted fragment marked with yellow):
CGGCCATTATGGCCGGGGTTCTGCCTTACACCTGTATTGTGTCATGTAATGGTATCATCACGGGTTGTCTCGATGTTAGCGGATATATCAATTTCTCCCGTGCAGCTTATAGCTGGTATATACTCATATCATGGATTCTAATGTAATATTAAGCTTTTTAATAGCAATTTTATCATAATATATCTTATACTATGTTTTGACTTTTTAATAATGGTTTCAATGGAAATTGATTATTT



gi|74167915|gb|DT637843.1|DT637843 EST1152774 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMH815 3' end, mRNA

TTCCACTGAAATTATTGTTGG
.||||||.||||||||||...
GAGGTGATTTTAATAACAGTT

EST sequence (targeted fragment marked with yellow):
CACCAATTATGGGATGCAGTTGTGGAGTGAGATAAATTCCGGGAATTTTGGGGCTAATTTGGACTGGGATTTGCTGGAGATTTTGCGTGGTTTGCAGCCTGGGAAGTGAGGGAGCATTTCAGGCCAAGCATTTGTCTTCCTGGGCCTGCACAGGCATTTTCTGGCCATTGATACAAAGGGTTTAAGGTACAAGGGAAATTGGGGGTGTAAGGGCTGGAGCTTCAAGGAGAAATTGGAGGAGAATTTTGACAATAATTTTAGTGGAGTTTCCAGGAGATTGGTGGAGTACCCAATAACTCGTTTTAGCAGTGTGTGCTGCCAGGGAGAATGGGTAACTGACACTTTTTGTGGGTTTTTGGGTAGTGCACTTGGGAGCCAATTCCTTTCTGGGTTTGATGGAGCTGAATGAGAAAGAGCACCAGGAGTCATTTCATCCTTTTTTTGAGCACTTCTGAGACCGGTCAGATGAGGAGCCTGTTGATCCTAAACATGGAGTTGAGGAATCTTGCAAGCCGAAGTGTGTGAAACCACTTCTTCAATATCAGGCATGTGTGAAAAGGATTGAACAAGATGAAACTGGGCATAAGCATTGTACTGGACAGTACTTCGACTATTGGCACTGTGTTGACAATGTGCCGCACACAAATATTCGAGAAATTAAATGACGAGGCATGCAGTGGATTGAAATTATAGAGAT



gi|5903784|gb|AW043255.1|AW043255 ST31B10 Pine TriplEx shoot tip library Pinus taeda cDNA clone ST31B10, mRNA sequence

TTCCACTGAAATTATTGTTGG
.|||||||||||| || ||||
GAGGTGACTTTAAGAA-AACC

EST sequence (targeted fragment marked with yellow):
CCGGGGGCAGTAGTGGTGTGGTAACCATTGAAAATGGCAGGCCGACGAACGCTTTTGTACGCTGTGTTCTTGCTGCTGTTCGTTACTCTCGTCTCAGCCGAAGTCTTTTTCGAGGAGCGTTTCGATGATAGCTGGGAAAGTCGTTGGGTGCAATCTGATTGGAAAAAGGATGAAAGCTTGGCTGGAGATTGGGTGCACACAGCAGGGAAATGGAACGGGGATCCAAATGACAAGGGCATCCAAACACATACAGACTATAGATTTTTTGCCATCTCAGCTGCGTACCCTGAGTTTAGCAACAAGGATAAGACCCTTGTTCTTCAGTTTTCTGTCAAGCATGAACAAAAACTTGATTGTGGTGGTGGCTACGTAAAGTTGTTAAGTGGTGAAATTGACCAAAAGAATTTCAGTGGAGAGACACCTTATAGTATTATGTTTGGGCCAAACATTTGCGGGTACAGCACTAAAAAAGGTCAAAACAATCCGTCATATAAAGGGGAAGAACCATCCTATCAAAAAAGATGTCCCCTGNGAAACAAATNAACNTACTCANGTTAAACTTCATCCTCCGACCGGNTGCACATATANCATACNCANTGGC



gi|21823632|gb|BQ698316.1|BQ698316 NXPV_068_C05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_068_C05 5'

TTCCACTGAAATTATTGTTGG
||||||||||||.||| ..||
AAGGTGACTTTAGTAAGGGCC

EST sequence (targeted fragment marked with yellow):
GGAGGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGTTTCAATTTCTCTCCTTGGCTGCAGATTGAATGGTACGCTATCCCCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGCTAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGATTTTAGATGTTTACGGGAATATTTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGGCTTTAGCTCTTTCCGGGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGNGNANTNTNNNNNNTTCCCTCNATGATTTCAGNGGAAGAAANNNNACGTCTNNNGGCAACCTCTCTCTGTTGCGGGCTTTAGCTCTTTCCGGGAATGATTTCAGTGGAAGAA



gi|74166177|gb|DT636107.1|DT636107 EST1151038 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGO10 3' end, mRNA

TTCCACTGAAATTATTGTTGG
|||||||||||| |||| |||
AAGGTGACTTTACTAACTACC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCCTTGAAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCTTTCAATGGACGCAATATCACGGGGGAACCCTCTTCCTCCATGCCCCATAAAAGGGACTTGGACGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGCTGCAGTTATACTCGTTGGCTGCGGATTGAATGGTACGCTATCCCCCTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTATTCCATCAATCATTTCAGTGGAAGAATTTCCTGGAATTATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACCGTTTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTGGAATGGTTTCAGTGGAAGAATTCCACCGTTTATAGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCCGGAATCATTTCAGTGGAAGAATCCCACCAGAATTCGGCCGTCTGGTCCAGTTGGAATCTCTCGGGTTGAAAGGTATAGATCTGAATGCAAGCATCCCAACTTTTCTGGGCAACTGCACTTCACTTACAGAACTGGATA



gi|21823632|gb|BQ698316.1|BQ698316 NXPV_068_C05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_068_C05 5'

TTCCACTGAAATTATTGTTGG
||||||||||||.|||. .||
AAGGTGACTTTAGTAATCGCC

EST sequence (targeted fragment marked with yellow):
GGAGGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGTTTCAATTTCTCTCCTTGGCTGCAGATTGAATGGTACGCTATCCCCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGCTAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGATTTTAGATGTTTACGGGAATATTTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGGCTTTAGCTCTTTCCGGGAATGATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGNGNANTNTNNNNNNTTCCCTCNATGATTTCAGNGGAAGAAANNNNACGTCTNNNGGCAACCTCTCTCTGTTGCGGGCTTTAGCTCTTTCCGGGAATGATTTCAGTGGAAGAA



gi|49445358|gb|CO364041.1|CO364041 RTK1_13_G10.b1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_13_G10_A029 3', mRNA se

TTCCACTGAAATTATTGTTGG
|||||| ||||| |||||||
AAGGTGTCTTTATTAACAACA

EST sequence (targeted fragment marked with yellow):
AAAACGGAGAGATGTATGCAGACAAGGAGAAGATGAGCGCAGCATATGGGTCTTGGAAGTCTCCAGTAACAGCAGATGTGGTCTCTGGAGCCGAGAAGCTCTTGGGAGGCTTCGCTGTCGACGGGGAAGGGCGTGTCATATGGTTGGAAGGTCGTCCAACTGAAGCTGGACGATCAGTTTTAGTGAGGGAGGCTGCAGATGCACGAGATGCAGCTGAAGATATCACCCCAGCTGGATTTAATGTTAGGACCTTAGTACATGAATATGGTGGAGGTGCATTTACTGTCTCAGGAGATGTAGTTGTGTTCTCCAACTATGAGGATCAAAGACTCTATAAGCAGTCTATCAAAGGAGACCATGTACCAATTGCACTCACTCCGGATTATGGAGCACCTGTGGTGCGTTATGCTGATGGAGTGATAGATCTTCACTTAGGCTGTTATATCACTGTAAGAGAAGACCATCGGGAAAGTGATACAAATCCAACTACAACAATTATTTCTGTGGAACTCAATGGGGTTGGAAAAACAGAGCCACATGTATTAGTCAGTGGCAGCGACTTCTATGCTTTTCCACGTTTGGCATCAGATGGGGCAAGGATGGCATGGATTGAATGGAAGCACCCAAATATGCCTTGGGACAAATCAGAACTGTGGGTTGGCTATCTTTCCGCAGATGGTAAGATTGAGAAACGGGTCTGCATTGCTGGTGATGATCCAAATATGATAGAATGCCCAACTGAACCAAAGTGGTCATCTCAAGGAGAACTTTTCTTTGTTACAGATAGGAAGAGTGGATTCTGGAATTTATACAAATGGGTTGAATCAACTAACGAG



gi|74162161|gb|DT632092.1|DT632092 EST1147023 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMFG37 3' end, mRNA

TTCCACTGAAATTATTGTTGG
|||||| ||||| |||||||
AAGGTGTCTTTATTAACAACA

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGATTCATTCGAGGAGGAATATCCACAGCAACTTGCTTAGGCAGATCTCGGCGGATCAGAAAACGGAGAGATGTATGCAGACAAGGAGAAGATGAGCGCAGCATATGGGTCATGGAAGTCTCCAATAACAGCAGATGTGGTCTCTGGAGCCGAGAAGCTCTTGGGAGGCTTCGCTGTCGACGGGGAAGGGCGTGTCATATGGTTGGAAGGTCGTCCAACTGAAGCTGGACGATCAGTTTTAGTGAGGGAGGCTGCAGATGCAGGAGATGCAGCTGAGGATATCACCCCAGCTGGATTTAATGTTAGGACCTTAGTACATGAATATGGTGGAGGTGCATTTACTGTCTCAGGAGATGTAGTTGTGTTCTCCAACTATGAGGATCAAAGACTCTATAAGCAGTCTATCAAAGGAGATTATGTACCAATTGCACTCACTCCGGATTATGGAGCACCTGTGGTGCGTTATGCTGATGGAGTGATGGATCTTCACTTAGGCTGTTATATCACTGTAAGAGAAGACCATCGGGAAAGTGATGCAAATCCAACCACAACAATTATTTCTGTGGAACTCAATGGGGTTGGAAAAACAGAGCCACATGTATTAGTCAGTGGCAGCGACTTCTATGCTTTTCCACGTTTGGCATCAGATGGGGCAAGGATGGCATGGATTGAATGGAAGCACCCAAATATGCCTTGGGACAAATCAGAACTGTGGGTTGGCTATCTTTCCGCAGATGGTAAGATTGAGAAACGGGTCTGCATTGCTGGTGATGATCCAAATATGATAGAATCCCCAACTGAACCAAAGTGGTCATCTCAAGGAG



gi|68025023|gb|DR166155.1|DR166155 RTPHOS1_9_G04.g2_A029 Roots minus phosphorous Pinus taeda cDNA clone RTPHOS1_9_G04_A029 5', m

TTCCACTGAAATTATTGTTGG
.|||||| |||||||| ||||
GAGGTGAGTTTAATAAAAACC

EST sequence (targeted fragment marked with yellow):
GGACATACCTCTGACCTCAGAGACTCAAAGGATTTGTAATCTATCAATCTTCTCAACTCAATATCAATTTTGATAGATTATATGAGGATTTGGAGATTGGGATGAAAGGTTTTGAGTATGACTTAGAATATGTGTTAGAGACAAATACGATATTTGATTTGTCTAACAATAATCTTACAGGGGTAATCCCTTGGAGCATGAGAAATTTGAGAAGCTTAAGATTGTTGAATCTATCAGGAAATCATCTTGGAGGAGAAATACCTGCATGCCTCAGTAAAATATCTACATTGGAAGAGTTGGACTTGTCCAAAAATAATTTGAGTGGAGCTATTCCTCAGGAGCTCTCTGAATTATCATTTTTGGAGGTTCTAGATGTTTCTTTTAACAACCTGTGTGGGCCAATCCCAACAGGGACACAATTTTCTACTTTTAGTGTATCATCATTCCAAGAGAATAAGTGTTTATGTGGGTATCCTTTGAAATCATGCAACCAAAATG



gi|13919451|gb|BG673798.1|BG673798 NXPV_075_B11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_075_B11 5'

TTCCACTGAAATTATTGTTGG
|||||||||||| ||||| ||
AAGGTGACTTTACTAACATCC

EST sequence (targeted fragment marked with yellow):
GATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACAGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTACAATCATTTCAGTGGAAGAATTCCACCATCTATTGGCAACCTCTCTCTGTTGTGGACTTTAGATCTTTCCTTTAATAATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGTGGACTTTAGATCTTTCCTGGAATGGTATAAGGGGAAGCATTCCATCTTCGATTAGCAACTGCACTTCACTCCAATACTTATCAGGTACGGAAAACAAATTGAGTGGTCCAATCCCTTCAGTAATCGGTTTGATGAAAAGCATATCATATATTGATTTATCCGACAACTCACTAAGTGGCAACATCCCTCCCACGCTATTCAATTGTTCTCCGCTATATTCCTTGGACCTAGACAATAATGACCTTATNNNNNACANNNCGAGTANNNNNGACGCCAATATGTCATTGCAGTATCTTTCTTTATCAAACAACCATTTAATTG



gi|74166177|gb|DT636107.1|DT636107 EST1151038 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGO10 3' end, mRNA

TTCCACTGAAATTATTGTTGG
|||||||||||..||| . ||
AAGGTGACTTTGGTAAGGTCC

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGACTCACAACCTTTGGCCTTGAAAGAAGTTGGGAGAGAGAGAAATGGATCATAAATCTATTCTTCTGCTCATCACCATGTTTGTGCTCTCTTTTGCTCATCAACATCATGTGTATGAGTATGAGCAGGCGGGTGGATTCACTGCTTTCAATGGACGCAATATCACGGGGGAACCCTCTTCCTCCATGCCCCATAAAAGGGACTTGGACGCGCTTCTGAGCTTCAAAAGGGGCATCGTATCAGATCCACATGGATGTCTCTCCAACTGGACGGCCCATAACTCACATAACGTCTGCCGCTGGAACGGAATTTCGTGCACACCAAACACGAAACGAGTGGCTGCAGTTATACTCGTTGGCTGCGGATTGAATGGTACGCTATCCCCCTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTATTCCATCAATCATTTCAGTGGAAGAATTTCCTGGAATTATTTCAGTGGAAGAATTCCACCGTCTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCGGGAATCATTTCAGTGGAAGAATTCCACCGTTTATTGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCTGGAATGGTTTCAGTGGAAGAATTCCACCGTTTATAGGCAACCTCTCTCTGTTGCGGACTTTAGATCTTTCCCGGAATCATTTCAGTGGAAGAATCCCACCAGAATTCGGCCGTCTGGTCCAGTTGGAATCTCTCGGGTTGAAAGGTATAGATCTGAATGCAAGCATCCCAACTTTTCTGGGCAACTGCACTTCACTTACAGAACTGGATA