| mature miRNA: TTGGACTGAAGGGAGCTCC species: Pinus taeda database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|70781530|gb|DR691178.1|DR691178 EST1081264 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAD520 3' end, mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CATGGCATCACCATGTTCTACCAAAACTTTTCCCCGATCTTCGCACCTCTCGTCTCCTTATTTATCTCGATCTGGAAGTAAATCTCATGTCATTGCTACATTATGCGGTCCACTTCCCCTCAACAGACTTTTCATGGTGAAACTAGAGACATCAAAATCTTTTGCGAGTAACTGGAGTCTCGAATGTACCAGGAAGCCATTGCCCCGTTCTCCACAATCTCGACGAGGTCACCTGCCTGTATTCATGATGCTCCCTACAGCAAACCCCGAAAGAGCCTCCCAAGAGAAACCCGTCAAATGGTCTGCTAGAGCTATAAAATCTTTCAGCATGGCAGAATTAGAAGCGCGCAAGATGAAATACCCTAACACTGGCACAGAAGCTCTTCTTATGGGCATTTTGGCAGAAGGCACCAGCCCTGCATCCAAATATTTACGGGCTAATGGAGTAACACTCTTCAAAGTTCGGGATGAAACAGTAAAATTGCTAGGAAAATCTTATCCACTTTACACCAGTCCAGAGCATCCAACACTAACTGAACCTGCACAGAAGGCATTGGATTGGGCTGTTGATGAGAAGATTAAGTCTGGGGGAAAGTGGCGATATAACAACAACTCACATGCTACTTGGAATCTGGGCACAAAAGGGCTATGCTGGTCAGCAAATATTGGCTAATCTTGGATTTGATGATAAGAATGCTGAAGAACTTGCAGAGTCTATAAAGGGAAGAAGTTGCCTTCAGTTCAAAATAAAAGTATTTTTCTACCCTTGCTATATCCATTTCA | |||||||||
gi|67686546|gb|DR111736.1|DR111736 RTS1_19_H04.g1_A029 Roots minus sulfur Pinus taeda cDNA clone RTS1_19_H04_A029 5', mRNA seque TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): TACTTATTTTCGCATACAAACAATCAAGCTGCCTTACATAATTACTCTACAGTCGCACAGTTCGATGGAGCAGCAGCGACGGCGCCCTATGCAGCAGCGCCCGCTAACAGCGAAGCAGCCCAGAATTCAAACCAACAGACGAATCAAAGTCTGTTTTCAAGTTCAAGTGCCTCGGCATTTCAAATCCCTTCAGGCTTTTGCAGAGAGATTGTTATGCCGGAGCAGCTTCATCATGAGTTTTTTAGCAGCCAGCCTCAGCCTCACAGAATATTAAGTGCCCCCCCGGTGTGGAACTCCAACAGCATATACACAGATTTTGGGAACAATAACACTAATAATATTGCAGTATCGGCGCCTAATATGATGAGAGGAGGTGGGCACTATAACTCATTAATACTCAGGGGTACCCTTCAGTCCAGTTCAAGTCCTGTTCGTGTCCGATCTAACCCTCCGTTGCTGCACGATAATGCCTCCGCCGGCCAATCTCCTCAGACCGGTGATGGCTTCTCGGGCTTTCGGATTCCGGCACGAATTCAGGGCATCGATCACGAGAACGACGATGTGAAGCCCTCACAGGTTTCCTCGAACTCTCGTTT | |||||||||
gi|49011635|gb|CO200460.1|CO200460 GEO2_7_C10.g1_A032 Root gravitropism October 2003 test Pinus taeda cDNA clone GEO2_7_C10_A032 TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): GGTCCCTGCCTGTATTCATGATGCTCCCTACAGCAAACCCCGAAAGAGCCTCCCAAGAGAAACCCGTCAAATGGTCTGCTAGAGCTATAAAATCTTTCAGCATGGCAGAATTAGAAGCGCGCAAGATGAAATACCCTAACACTGGCACAGAAGCTCTTCTTATGGGCATTTTGGCAGAAGGCACCAGCCCTGCATCCAAATATTTACGGGCTAATGGAGTAACACTCTTCAAAGTTCGGGATGAAACAGTAAAATTGCTAGGAAAATCTTATCCACTTTACACCAGTCCAGAGCATCCAACACTAACTGAACCTGCACAGAAGGCATTGGATTGGGCTGTTGATGAGAAGATTAAGTCTGGGGAAAGTGGCGATATAACAACAACTCACATGCTACTTGGAATCTGGGCACAAAAGGGCTATGCTGGTCAGCAAATATTGGCTAATCTTGGATTTGATGATAAGAATGCTGAAGAACTTGCAGAGTCTATAAAGGAAGAAGTTGCCTTCAGTTCAAAATAAAAGTATTTTCTACCCTTGCTATATCCATTTCATGCCACAAGTTACAGGACGAACTATGCATGGACATTTTGGCATCTGTGTCTCCACTCCCTGAAGTTAATGACCTTTCAACATATGGTTGCGAACCCTAAGCAAACAGACTGTAAAATTCATTCTACATGCAACATGTTTACGTGGGGTGGCTATGCCTCTTTTTATGATTGTGATGAAATGCAACAGAGTTTTCATATTTCTGGATACAATCCAGATTATAGGGTGGCCAGATTAATAGTTGACAAAGTTCATCAGATGTGTTTGCTATGGAATCTGCAATGATTTCATTCGAATAAGTG | |||||||||
gi|74166768|gb|DT636697.1|DT636697 EST1151628 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGU78 3' end, mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CGGCCGGGGATCGGAAGCAGTACTGCAAGCGCAAGCCCTGGCTGCTCAGATGTTGTCCATGGCATCACCATGTTCTACCAAAACTTTTCCCCGATCTTCGCACCTCTCGTCTCCTTATTTATCTCGATCTGGAAGTAAATCTCATGTCATTGCTACATTATGCGGTCCACTTCCCCTCAACAGACTTTTCATGGTGAAACTAGAGACATCAAAATCTTTTGCGAGTAACTGGAGTCTCGAATGTACCAGGAAGCCATTGCCCCGTTCTCCACAATCTCGACGAGGTCACCTGCCTGTATTCATGATGCTCCCTACAGCAAACCCCGAAAGAGCCTCCCAAGAGAAACCCGTCAAATGGTCTGCTAGAGCTATAAAATCTTTCAGCATGGCAGAATTAGAAGCGCGCAAGATGAAATACCCTAACACTGGCACAGAAGCTCTTCTTATGGGCATTTTGGCAGAAGGCACCAGCCCTGCATCCAAATATTTACGGGCTAATGGAGTAACACTCTTCAAAGTTCGGGATGAAACAGTAAAATTGCTAGGAAAATCTTATCCACTTTACACCAGTCCAGAGCATCCAACACTAACTGAACCTGCACAGAAGGCATTGGATTGGGCTGTTGATGAGAAGATTAAGTCTGGGGAAAGTGGCGATATAACAACAACTCACATGCTACTTGGAATCTGGGCACAAAAGGGCTATGCTGGTCAGCAAATATTGGCTAATCTTGGGATTTGATGATAAGAATGCTGAAGAACTTGCAGAGTCTATAAAGGGAAGAAGTTGCCTTCAGTTCAAAATAAAAGTATTTTCTACCCTTGCTATATCCATTTCATGCCACAAGTTACAGGA | |||||||||
gi|66691809|gb|DR014303.1|DR014303 HEAT1_24_D12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone HEAT1_24_D12_A029 5', mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): GCACGAGGAATATGGCTAGCCATCTCGCAAATATCTTTGGAACTGAGCAGGATCGCGCCAATTGCTCTTTTTTACTACAAGATTGGTGCCTGCCGACACGGTGACCGATGTTCTAGAAAACATATCAGGCCTCCCTTCAGTCAAACTATACTGCTCCCTAATGTATATCATAACCCTGCAAATGATCCCAGCTGCAAACTCTCCGACAAAGAGCTACAGGACGGATTCGATGCTGTCTATGAAGATTTGTATTGTGAACTTTCAAAATTTGGACATCTTCTCGAGCTTCATGTCTGCGACAATGTAGGGGACCATCTTATCGGCAATGTATATGCTCGTTACGAGTGGGAGACGGAAGCACAAGCAGCTGTTGACAATTTGAATGAGCGTTGGTACGCAGGACGACCCTTGTACGCGGAGCTATCTCCTGTCACTGACTTCCGCGAAGCCTGCTGCCGTCAAAATGAAAATGGCGAATGTAACCGTGGCGGATTCTGCAACTTTATGCATCTACGACTAGCTTCGAAGGATCTTGTTAGCAGTCTTCGCGCTGGACAGCGCCTGGAGAGACGCCTCAATCCACCGAAAACTGACGGCGGCGCCGGAGGTTGGCAACCTGGTCAGCGAAAAGCACGTAATGGCCGGAGTGCTAGTCCTTCATGGGGCAAAGGCGATGATAAAGAGAAGAGGAGGTAGAGGCTAAATTTCTGTTAACTTTTAGGATCCAGAGCGCAGCTCCAGCGCACCGTTCTCATAACGGACTGACCGTGAAATAGCAACAGGTTATCCCGATCGTGGTCTATGTCCCGCTTACATCAATCT | |||||||||
gi|70772930|gb|DR684454.1|DR684454 EST1074531 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAAS86 3' end, mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): GGCCGCATATGTAGATACCGCCTCTTCTGAACAAAGCTCCTAAAGACCTATTGCAACACTCCCATCAGAATCATCGTTTGGTTTTTTGTATGCATTTTTACAATTTCCTATAGAAGAAATCCTTTGCCATTCCTGATTCATTAGGACTCAGACTCTGTCCCTTAGGCATTGGGTGATTTATGCATGCAGTTTTCATGGTGGTTACAGAGAGCTAGAGGAAATTTTGCGTATATTGGGTGTTTCGTTGAGAACAGCAGCAGCCATGGGTGCCCCAGTTTTCAGAAGTTGCCTTCAGTCCACTCTGAAGATATTGAACTCCATCCTAACCATGGTTGGGTTAGCAATGGTGTTGTATTCTCTGTGGATGCTCAAGGAATGGAATTCGCAGGAGAACGCATTAAGGCCTGGCAGTAGTCTTGTGGGCAGGCCTTTTCCGGGATTGCGCTCTTCTTTTGGCCATATGCATGTTTCTTCTGATCTGCCTCCTCCCTGGTTTATCTACACATTTCTTGGTATGGGCATTGTCTTGTGTTTGATTACACGCTCAGGTCATATTGCTGCTGAGACTGCGAATGGACACTGCCTTTCTTGTTACATGTTATCTGTTGGCTTGGTTTTGATAACTGAGGCAGGAGTCACTGCCGATGTTTTCTTCAATAAGAACTGGGAAGAAGATTTTCCAGAGGATCCTACAGGACAGTTTGACCAAGCAAAAACTTTGTTAGAGAAAACTTTGACATATGCAAGTGGATTGGCTTGATTGTTCTTATTTGCAGTTCTATCTGTCCTCGTTGCATGATTCTTCGAGCTCTG | |||||||||
gi|67708811|gb|DR120501.1|DR120501 RTMG1_30_D09.b1_A029 Roots minus magnesium Pinus taeda cDNA clone RTMG1_30_D09_A029 3', mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CCAAAATGAAAATGTGCAATTGCTTGTGACTTGTACAAACAATAACAGGTCCAAAGATAAGTGTGCTGGTTCTCAGTCACGAAAATTAACTCATCGAAGATTCCGATATGCCATGTTTGGCGTCTTCGAATAGTTACAGCTTTGAGCTTTAAAATCTCCTATACTCTATGCCAAGATTAAGTTAATATCACGTAGCCTTTTTATTAACCACTACTACATCTCATAAAAAGCAATGCCAACAAGTCATACAAGAAATGCTGGTATTTGAAAGCATCGCACCCATAACCAACAAAAGTTTCCCTTTTCTTACTATAAAATTACATAACAAAAAGTACCGTAAATGAATTCAAATCAGCACTTGTTCCTCACTTCGTACATGAAAATTCCTTTAGTGTTACAAAGCTATCTCTCCCACAAAAGAGTGTGTCAAAATTACACGAGCAAAACAGCATTTATGCATCCATCATTCTCTGGATTGTTGGTAACTTGAGCATATTTTCCCCACACAACCTTGCCTGCTGGGGTCACCAGACCAAGCTCACTTACATTCACCTCAATTATGGTTCCTTTTGTGATAACGCCAAGAGAAGTAAACATAGGACCATTTGGATTTTTCTTCACTCCAATAAGATCAAGATTGAAGGTGCATTTTAGTTCAGGATGTGTAACATGTGCTTTGGTGAAACGCAATCCCATGGGGCGAATAAATCGCTCATACTTGGGAGGCTTCCTTGTGAACCCAGATCCCACAAACGTAACCTTTGTGACCATTCGTTTCCATTGTTTGGTTTTTCTTTTGCCAGATCGTATGACACGAAACATTTCGTCCTCTGCAATGGGCCTCACCTTGGGAAGAGGGAACTCCCATTTACCAGCTTTCTCCTTCCTTTTTTGCTTGATTG | |||||||||
gi|67189868|gb|DR078315.1|DR078315 RTFEPL1_3_G01.b1_A029 Roots plus added iron Pinus taeda cDNA clone RTFEPL1_3_G01_A029 3', mRN TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CAACAATTCACTATTCACTATTGTCGAAATTAAATATACAATCAAATATTATACAAAATTGACAGGATAAAAGCCTGTTAATCACGCTATTCATGATGGATGTTCATATATGTATTTCACAATATAGATAGATCGATCATGAAATGTATATATACATCAATTTGACGTTATATCTACGCTGTCAGATGTATATGAACAGGAATCTAACTAATGGTATATGTACACAACCAAACGCCTACGCAACTCTCCAACCGCGTATTGCATTAATATTCTGTAACTACTCTGTGCTTATTGCCCGCCATGAATAGCTATCAGTGTATATAATAAAAGTACAACAGCAGGGTCCGCCATGTACAATGCTATATAAGAGTTAGATACTTGTAGGTAAATGAACCAGTAGCCGGGAGTTTCGAACGATCTGGACAAATAAATCACACTTCATAGTTAGGAAAGTACAATGGAAAATTTTCAATGTCATGAATTCTAAGAGAAAAACAATTTACTAATTTCAATATAGAGTCAGTAGGAATGATCCAAACACATGAGAGATTGAACATAAGCAGAATCTGTTAAGCTGAAATGTGAAAAGTATCATATAAAAAAACATAATGTTAACCCGGCTAAACAAAAGGAAACAGCAAAACCTAATTTCAGAAAAATGTATGCTACATAAGGGAGCTCCCTTCAATCCAAGGAAAAGACATTTCCTGGACAAAATCAGCTCCCGCATCATTCACACATCAACCCATTTGTTTCGTTTGTGGGTAAAAAGTGAGTTTGTGAAT | |||||||||
gi|67961209|gb|DR163304.1|DR163304 RTFE1_42_D06.b1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_42_D06_A029 3', mRNA seque TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CCGGGTGGTTAAAGGTCATACTGGATAGAAGATCTAGCGAAAGACACGGAGAACAGAGTCAGTAACCGATCTAGGTTGCCTTCGCTGCATCTTTTTCGGCCATCCTCTTCTTGAACTCTGCGAGCTTAGCGGCGGAGGCGATCAACCGCTTCCTCTTCCTCCTACCGGCACCTCTCTTCGGTCCAGAGATGATGATCTCTTCCGTCAGCCTCTTCTTCTTCTTCACGAGAGCCTCCGCCCGTATTTTCTCGCGTTTCTTGTCGCGTTTTCTGAGGGTCGACATGGACGCCTTGAGCAAAGTACCATATTCAGAGTGGAACTTGTCGAGATCAGCGGGTTGGACGCGAGTCGAAAATTTTGTCTTTTTCCCGTCCATAGCGCGTATAAGACAAGGATACTCCGTCGTGTCTTCTCCATGTGTGGGATCAGTTCCATCGAGTTCACCATAGGACACGACTCGAACAGCACCCCTAACCGCTCCAGGAAAGTCGCGTTATCTACAAGCATCCAGCGGGAATGGAGTGCGGGGGAAGGTTTTTTTTAGGCCAATACTAGTATTATTAGAGTTGGATTAGGATACCATACAGCTAGCACTGTACAGAGCTAACCGTATACAGGAGGGTGGAAAACGTTGAAGATAACACAATTACCACATGCCAAGGGTACCTCATTGTATACACGTTTAAAAGCATAATGTTGGCTCTTTCTTACATAAATGAGCCTCAATAAAGGATTCACTCTTCATAATGGCAGAAAAATTATTAGAGTTTCACACAGGCAAACTAGATTGCAAGTGCATGGTCTCATAACTTTCAACTGCTCGAACTCTTTGTATG | |||||||||
gi|67552213|gb|DR093072.1|DR093072 STRR1_5_G10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_5_G10_A033 5', mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): GGTCTATTGAACATGCAGGTCATGTTAATGCATTGGAAAATCATTCTAGAAGCACAACAGAAGATGATGATGCTGTGCTACTTCATAAACGCCAGAGACTAGGGGGTTTATCAATTAGCTCAAGAAGCAATGAAATGCAGCATGAGCAATCTCATGATCCTCATACTCATCATCACCATCATCATCATCCTTCCCAAGTTCATGAACATGATTCATTCCATGATCCTCAGCAACTTATCCACATGGGCTCCTTAGGTTTGTGCTCCACACTCATGCACCTGGCCCCCTCTGTTCAGAGCTTCTCCTTTCCAAATTCTGTTGCTGCTGCTATATTCAGCCCTATTAGCCTTCAAAGAAATGAGATGGCCAAGTCCATTTCTCCTTTCTGTAATTCTCAGGATCAACAGAAGCATCTTCCTGGCAACATAGCAGCCTTCACATCTAACCCTGGCCTGCATAACAATTCGTTTCTGCTAGCTGTTGACCAAAATGAAATACAGGAGCAGCTGCAGGTTCCTGCTATAACTAATGATCATATGATCAACTTCTCAGTGCCAGGGATCTCTGCCAGGGAGACCCTTCAGTCCAATTCTTACAATATGAACTATATGCCATTCCACCATATGCAAAGGATTCAGCCAAGCCATCAAACCACAGCCCTAGTCGATAGTCATCTGCAAGGTTTTGATACTGCCCGTATGATGGGAAGGCCAATCCAGGATGTTGGCATTCAAGGATCGAGAAATTCAGCTTCAAAGGGGAACAAGAAGCAAGAACATCAGTACAACTAAATTCCATGATGCCATGGCGGCAACCTCAGCGCGCCAGCGATCTTTGAGTAGGAGTAGTACTTCATTTAGCTCGAGGATTT | |||||||||
gi|20380573|gb|BQ197309.1|BQ197309 NXLV112_C11_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA clone NXLV112_C11 5', mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): TGGTCTAGCGGAAAGATAAGGAGGATCTATCAGGCTGTCTCGAATGGGAAACATAAATCTCATCATTTGTGTAAGGAAGATAAAGAAGCTGGTTTACGTTCTGATCATGCATGGCGTGCTGAATCGGTTCTAAAGAAGGGTCTCTGGTTTTCAAAGTGGAAAAAGAAGTTCAAATACCATCGAGGTACCTGCTTTTATCGACATATGCTACGTGAATTGTTTCGCAGGCGAGAAAGGAAGCAAGCCTAGCAGCCATCATATTGTCGGATATTTTTAACTTTCAAGAGTCAAGGTACTTTATTTTCTGAAAGTATATTATGGCTTCCATATTCCCAACTTGAGGCAGCCTGAAGACACAATTACTTGGTGCTATATGCAAGATAAAAAGCACTGGGCGCAGTCCATTTTTGATCATTTAATGCGAGCCTCACTTCAGTCCAATTAAAAGGGTTGATCGCACTTTTTGGAGAAACGTTTGTAAAGGGACCACATTGTTATATTATTTGATATGGGAAGCCTTCTACTGACCATTCTTATGCAAGATAAAAAGCACTGGGCGCAGTCCATTTTTGATCATTTAATGCCAGCCTCAATTCNNNCCAGTAAAAANNNNTTGATCGCACTNNNNNCAATTTTGGNNNAATGTTNNNNNNAAGANCACCATTGTTATATTATTTGATATGGGAANNCCTTTCTTAA | |||||||||
gi|70770717|gb|DR682241.1|DR682241 EST1072316 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAA854, mRNA sequenc TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CACGGATGTTTTAATTTATAATTTTCTATGAAGATTTATCTCTCATTTTCAAAAGAGTTACAATGGCAGATCTGGAGGCAATGGTATTTAGTAATATGACAACTAAATTAAGGAAGGTAATCAACACAATTGCAGTGTTGGAGGGCAATACAATGGTGGCGTTGATATTATTCTCGATGCCAACAGCAATATTAACCACGTTGTTAGTCAAGAATCCTCCATTTGTATCACTTGTTGCCGCCTTCAGCTTCATTCTTACATTCAAACTGCAATCCTACCGACCATAGATCCACCGTAAGCAACGATACACTGCCCGTTCCCGGCCTGAAAATGAATCCTAAAACTAACTTCTAAACTTCTCTAAACTGTAGGAAGGTAATGCAATATGCAGGGCACACCTCTCACTTTTTTTGACCTTTTTTTCCCTGTAAAATAAGAGAATGAATAAATTAGTTAATGTGCATATTATTTTATCTTCTACGCTTCACTGGATCTTTCTTCAGTTCGGAACGATAATTTTCCATGTTTGCTTTGACCCATAATCGTTTGTTTACAAGCTCCTCCTTTACTGCTTCGTCCATACAAATCCAAGTTTCAAAAGGGATTCCAAGACATCCCTTTGTTAAATAGCATGCATCATCCCAAGTATAGGGTAAGCATTTTATCCTGTACCTCCAACACCAACAACAGGCCCATAACACCAACTTCCCAAGTGTATATGGAAGAAGTACAAATCGAGTTCCAAAAAGTTTCCAAAAAGATGGATTTTCAGCTCCTTGAATTTGTAATTCAAGTTCCCTGCTAAGCTCATCATCCACTTCATCCTTGTTCTTTTGTTTTGGACCTTTCCTCTTGTTTGCCATCCCTCCATTGCG | |||||||||
gi|74160986|gb|DT630918.1|DT630918 EST1145849 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMF240 3' end, mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CGGCCGGGGTAAGTATTATATATATTGGATTTCTGTATAGCTCTCTTCAGTCCAAATGGAGGTTTTCATGAAGGTAGATCAGCTGCCGACTCACCCGTCTGGCTCTTCTATGAAGGAAATCAATGGCATAGACTAGCCGAATGGTTGATGCGGGAGCTGGTTTCTTCTCTATGTTACCCTCTGTTGGCTTGAAGGGAGCGAGACAAATCTATTTCTGTGTAATATACCATATTGGTGAATATACTTGAATATGAATGTTTAATAGTTAAAGGATGAACATTGAAGAATGAATATGGTTTTTAAGGTTAAACACCAAAATTTTATAATAGTTAGACAACTCCATTTTAGTTTTGGGTGTATGTTCTCCTCTTATTCAATGTTTTTAAAGTTTTTGCATTCAGCATTCTTTTAGAAAATTTCAATGTTGATAATTAAAATCTGATCTTCAATGCCAGAAATCAAATATTTTAACATATTCTAATTGTATAGGATAGTCCTGAATTATAGTATATTCAGGAATCAAGGATATTCGCATATTTTTATTATTCATCGTTTTATTAGTATTATATTTCTAATTTCGCTCTCTGGTTGATAGATTCGTGAAATGTGAACTGTCTAACTATGAAATTTTTACCTATAAAATATAATATGTATTATTTAATGTTAAAATGTTTGCATTTTTATCAGTTCAACCAGCAAGCCAATGCCTATCAGCATTCACAAACCGTGACTTAGTGACTGTGCCGGTCTTAACATATTCGACTTTCA | |||||||||
gi|21827975|gb|BQ702659.1|BQ702659 NXSI_131_A10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_131_A10 5' sim TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): TCTCCAGCCCTTTTAAAGTCTCCATACCCTGGAGCTCCCTTCAGTCCTTACGTAGGCGGTAGGCTGATCATAGATCAAAATATTTTCTTGTTTCCGGGCTTTACAGCAGAACAGATCTTTTCCCTCGGCTGCCTTTTTGCTTGATTTCTGTTGGAGATGGCTCCAAGAGATGAGCTGCAGAACTGTGGAAGAGGAGTCGGTCAGACTACGGCCAAAGAAGTGCATTTCAGAGGTGTGAGAAGGAGGCCTTGGGGTCGATTCGCGGCGGAGANNCGAGATCCCTGGAAGAAAACCCGGGTCTGGCTCGGTACTTTTGATACCGCAGAAGAAGCTGCGAGGGCTTATGATAACGCAGCCAGGACTCTGAGGGGCGCCAAGNCAAAAACTAATTTTGCCACCCCGAGGGACAACCAGAGTAGCAGCCAGACCAGCACNNTGGNNTCTTGGTCGAGNNNTNAGAACGTCNTCGNNNNTCGTTC | |||||||||
gi|70784436|gb|DR694084.1|DR694084 EST1084174 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAE791 3' end, mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): GACGAAATTCAGTTTATGGGCACCTGGCGTGCTTGCGGTTTAAGACGCCACATATGTAGATACCGCCTCTTCTGAACAAAGCTCCTAAAGACCTATTGCAACACTCCCATCAGAATCATCGTTTGGTTTTTTGTATGCATTTTTACAATTTCCTATAGAAGAAATCCTTTGCCATTCCTGATTCATTAGGACTCAGACTCTGTCCCTTAGGCATTGGGTGATTTATGCATGCAGTTTTCATGGTGGTTACAGAGAGCTAGAGGAAATTTTGCGTATATTGGGTGTTTCGTTGAGAACAACAGCAGCCATGGGTGCCCCAGTTTTCAGAAGTTGCCTTCAGTCCACTCTGAAGATATTGAACTCCATCCTAACCATGGTTGGGTTAGCAATGGTGTTGTATTCTCTGTGGATGCTCAAGGAATGGAATTCGCAGGAGAACGCATTAAGGCCTGGCAGTAGTCTTGTGGGCAGGCCTTTTCCGGGATTGCGCTCTTCTTTTGGCCATATGTATGTTTCTTCTGATCTGCCTCCTCCCTGGTTTATCTACACATTTCTTGGTATGGGCATTGTCTTGTGTTTGATTACATGCTCAGGTCATATTGCTGCTGAGACTGCGAATGGACACTGCCTTTCTTGTTACATGTTATCTGTTGGCTTGGTTTTGATAACTGAGGCAGGAGTCACTGCCGATGTTTTCTTCAATAAGAACTGGGAAGAAGATTTTCCA | |||||||||
gi|66979876|gb|DR056309.1|DR056309 RTCA1_29_A11.g1_A029 Roots minus calcium Pinus taeda cDNA clone RTCA1_29_A11_A029 5', mRNA se TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CCCTTTTAAGTCTCCATACCCTGGAGCTCCCTTCAGTCCTTACGTAGGCGGTAGGCTGATCATAGATCAAAATATTTTCTTGTTTCCGGGCTTTACAGCAGAACAGATCTTTTCCCTCGGCTGCCTTTTTGCTTGATTTCTGTTGGAGATGGCTCCAAGAGATGAGCTGCAGAACTGTGGAAGAGGAGTCGGTCAGACTACGGCCAAAGAAGTGCATTTCAGAGGTGTGAGAAGGAGGCCTTGGGGTCGATTCGCGGCGGAGATCCGAGATCCCTGGAAGAAAACCCGGGTCTGGCTCGGTACTTTTGATACCGCAGAAGAAGCTGCGAGGGCTTATGATAACGCAGCCAGGACTCTGAGGGGCGCCAAGGCAAAAACTAATTTTGCCACCCCGAGGGACAACCAGA | |||||||||
gi|67687445|gb|DR112635.1|DR112635 RTS1_29_B09.g1_A029 Roots minus sulfur Pinus taeda cDNA clone RTS1_29_B09_A029 5', mRNA seque TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): TCTAAGGTGGAGATCACTTCAGTCCAGTGCCAAAGCAGAAACAGCTTTAAGAATCTTATTGAAAAGACATGTGCTGTATTACGGACAAAAACATTTTGTTTGCTTTTGACAATGTGACTTGCCTTTCCCTGTTGAAACAGCACCAAAACTACAAGTGGTTTTATATTTGATGATAGATGGTCAAATATCTTTGTGAAGCCGTTAAGTGATGTGCTGTATTATGGACCAACACTACCTGTGGCTTTATTTTCTCTGATAGATGGCCAAATCTGTTTGTGGATCTGTTAAGCTGCATCGATTCTTTGCTGTTATGAGAGTAGGTGTAGTAATTACATTTGATCTAGTGCTGGTTTCCAGCTATGGGTCAATTTTCTGTTGATGATAAGGGAATAGAAAGAAATAACAGGTATTTCTTATGTATTCTGGTGACTATTTTTTTCGATCATATCTGCATTAGGGAGATATTTAAAGAAATTTGTCTGGGCCCTTGCATACTAATGGATTGTGTTTGTCATTAGTATGTTATGTCAATTGTTTTTCCTGGAAGTTAAGCTTGTATAGATTGTATTTTCTGCTGTATTTACATAATCCTCTTATC | |||||||||
gi|51495441|gb|CV032616.1|CV032616 RTNACL1_17_G07.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_17_G07_A029 3', m TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): ACCGTGGAAAAAAAGAATTTATAAGCATAAGCTATTGCAATATAGGACAAGCTCTATTGCGTTTAATAGCAATTTTTTGTACTACAGCATTGGATTCATGACACAATTTGCCTCGCCTCGAATCACATAAAAGCAGTACGTCCTTAATAATTTGTCTTATCTCTAATGGGCATCGATGACTGGCCATTCGTGATCATGTCCATTCCGGCACATGCACAGCATGAATTTGTTGGAATGTTTGTAGAATTTTGGATACCTGCCAAGACTAACAACGTATCAGTTTAATACAGCAATTTCGGCGAATCACTTTGCTTGTTAAGCGACCAACGCGAACTTGCTAGCTCAGCCTGTAAAGTCGTTAATATAAGGTAGTGTAATAAATATTACGAGGAAACAACAATCTTAAAAAGCGATTGATACAATTCTTTTAATGTGTTATTCACGGTTGACAAGCATGCAGATTTATAACTATTCATAGCAGAAATGACATGATTAAATGTGTTTGCACAGAAGAACTAACATGAATTATTCAATTTACCATAACAAAATATAATTTCACGAATTGTAAAGAGGCAGTAGACTTTCTGGGAGCTCTCTTCAATCCAAGTAAAAACAGCGTAGTGGCAATACGACTCCCGTGTCATGCACACCATTATCTTGCCGCCAATACTGAACCTCGAGGATTACAAGATAGTAGAGTCCATGAACCAGCAGTTGAATCATCCCTATACGGCCTTTCGTTGGACTGAAGAAAGCTCCCCGTAACCTCCTCCCTTTTATATTAGAAATCTAACGTAACATCAACG | |||||||||
gi|74157636|gb|DT627568.1|DT627568 EST1156317 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PIMCO08 5' end, mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): ACGTCCTCCCTTCAGTCCAGCGCAGTGGCAGGAACTGGAACACCAGGCGTTGATTTTCAAGTACATGATGGCCTGTGTCCCCGTGCCGCCTGAGCTTATCATTCCTATTCGGAAAGGTTTGCTTTCTCTTCCCCAAAGATCTCCTCCGCTTCCTCATCATCATCTTCCCCCCACCCTCGCGCCGTGGAGTTCGTTCCACATGGGATTCGCTGGCAACATGGATCCAGAACCGGGAAGATGTCGGAGAACAGACGGTAAGAAATGGCGTTGCTCCAGAGACGTCGTTCCGGACCAAAAGT | |||||||||
gi|21822824|gb|BQ697508.1|BQ697508 NXPV_054_C06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_054_C06 5' TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): ATCACTTCAGGTTGAAGCTGAGAAACCTACTGATAGCTTTAGGACTCTAACTTTGGATATGGATTGTGTCTCAAATCAGCCTAAAGTTGAAGCTGAGAGTAATAAAGGTACATTGAGCTCAGTTATGGATTCTGTTCCAGTTCAGCCAGTAACTGTATCGAGCTCAAATTTGGGTTCCCCTTCAGTTCAACTTCAGCCTCGAGTTGAAGCTGCGAATGGTGATTGTTGTTTGGATAAGCTATCAAATACAGCATTTGATTCCATTCCTTCTGTGCAGGGAACATCTCCAATTCATCAGTCAACAAACAGTTCACCTGCAAGCAATAAGCCGGAAAATGCTTCAGCACAGCAAGNNGTCATTTCTTCTGGTGACTCCATTCGCACCAATCACAAGANNNNNNNNGAGTCACCTATCAAAANNAGNNNANNAAA | |||||||||
gi|70770364|gb|DR681888.1|DR681888 EST1071963 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAA328 3' end, mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): GTAAGTATTATATATATTGGATTTCTGTATAGCTCTCTTCAGTCCAAATGGAGGTTTTCATGAAGGTAGATCAGCTGCCGACTCACCCGTCTGGCTCTTCTATGAAGGAAATCAATGGCATAGACTAGCCGAATGGTTGATGCGGGAGCTGGTTTCTTCTCTATGTTACCCTCTGTTGGCTTGAAGGGAGCGAGACAAATCTATTTCTGTGTAATATACCATATTGGTGAATATACTTGAATATGAATGTTTAATAGTTAAAGGATGAACATTGAAGAATGAATATGGTTTTTAAGGTTAAACACCAAAATTTTATAATAGTTAGACAACTCCATTTTAGTTTTGGGTGTATGTTCTCCTCTTATTCAATGTTTTTAAAGTTTTTGCATTCAGCATTCTTTTAGAAAATTTCAATGTTGATAATTAAAATCTGATCTTCAATGCCAGAAATCAAATATTTTAACATATTCTAATTGTATAGGATAGTCCTGAATTATAGTATATTCAGGAATCAAGGATATTCGCATATTTTTATTATTCATCGTTTTATTAGTATTATATTTCTAATTTCGCTCTCTGGTTGATAGATTCGTGAAATGTGAACTGTCTAACTATGAAATTTTTACCTATAAAATATAATATGTATTATTTAATGTTAAAATGTTTGCATTTTTATCAGTTCAACCAGCAAGCCAATGCCTATCAGCATTCACAAACCGTGAC | |||||||||
gi|48937172|gb|CO166631.1|CO166631 FLD1_63_H07.b1_A029 Root flooded Pinus taeda cDNA clone FLD1_63_H07_A029 3', mRNA sequence TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): TGTTGGAGCTCCCTTCAGTCCAACCAAAGCTTGTGCAGCGGTGGTTCAGCTGCTGATTCATGCATTCTACTTCCCTGTCCGTGACTCTCCAGCAGCCTGAACAAATCAATCAATCGACCTGCATGACAGGATAGTGGTGTGCATGACGCAGGAGATGTACTGTCACTAAACACGCATTTCTTGGATTGAAGGGAGCTCCACTTATCCTCATCATCTCTTTCTGCAACTTGTTTATGGAATTTGTTTTGTTTTTAACCTATTTCATCTCTAACAATTTTCTCTTCTCTATTTGTTTTGGGCTTGCTAACAACTGTTATGTGCCCTAAGCCCTGCATGTCAGTGTTCCAATTTTTATTATAGCTGAATCTTTGTTCGAGTCAAATAAGACTTAGGTTTAACTTGATTGATCTGCATCGCTATAGTTTCAGGTTTTGTATATTCTGGTTGTTCACTATGATCTAGTTAGAGTTCGATCGAAAAGAATGGCAAATCTAATGATTATTTGTTGAGTGGCTGATTGTGGTACGTTTCGTTCTGTGCAAGAGTTTGGCCGGTCGCTTTTACATGGTTATGAATTATATTGTTATTTCATTTTAATTCCGATCTGTCGCTGAACGATTGATCTATAGTTGATTGTAACCAGGTTATGTATGAACTGGCCAGAGTGATTGAAAAAGTTTCATTTGTTACAAATAAAATACGATACCAATAATTAATGCTTCAGTGATATGAAATGGTTTGATCCATCTTATTGATTTTTTTTTGCAAAGTTTTATTCTATTACAGAAATAGAATTGTGATT | |||||||||
gi|74155147|gb|DT626231.1|DT626231 EST1158155 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMA853 5' end, TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CGTCGGCCCTCATTCAGAGCTTCCCCCTCCGTGCCTTGTGTCTCCAGCCCTTTTAAAGTCTCCATACCCTGGAGCTCCCTTCAGTCCTTACGTAGGCGGTAGGCTGATCATAGATCAAAATATTTTCTTGTTTCCGGGCTTTACAGCAGAACAGATCTTTTCCCTCGGCTGCCTTTTTGCTTGATTTCTGTTGGAGATGGCTCCAAGAGATGAGCTGCAGAACTGTGGAAGAGGAGTCGGTCAGACTACGGCCAAAGAAGTGCATTTCAGAGGTGTGAGAAGGAGGCCTTGGGGTCGATTCGCGGCGGAGATCCGAGATCCCTGGAAGAAAACCCGGGTCTGGCTCGGTACTTTTGATACCGCAGAAGAAGCTGCGAGGGCTTATGATAACGCAGCCAGGACTCTGAGGGGCGCCAAGGCAAAAACTAATTTTGCCACCCCGAGGGACAACCAGAGTAGCAGCCAGACCAGCACGGTGGAATCTTGGTCGAGTCCTAAGAACGTCATCGTAGCTCGTTCCGGTCCCCCTTCTGATGCCTCCTGGAGGAATTTCTACAGCGCCAAATACTTGGACGCGGCAAGGGTTACTGGTAACGCAAATGGAAACCCTTGCTTTAAAGAAGCTGCCGCTGCCGCTGCCTGGAAGACAATTTATGTTAACAGAGGCGTGGAGAGCAGAGCTATCGATCTAAACATCTCGGCTCTCGATTTCGGTCGTGTGGATGATGCGGCCACGATAAATGCAAGGGCGCATGAGAGCATAAACGGCGCCGTTGCGCTTCGTTGTCCTGCCGTGAATCCCTTCGACTGCCCCTC | |||||||||
gi|5860268|gb|AW011490.1|AW011490 ST21D12 Pine TriplEx shoot tip library Pinus taeda cDNA clone ST21D12, mRNA sequence TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): ATGGCCGGGGGAATCGGTAATTTTAGCACTCTGTCTCTTTTGCAACCGCGTACCTTCATTCAGCTGCCTTCAGTTCAATTTTCCTTTCGGCAGAATGGAGTCCGCCATTTCTGCAAGCAGAGGAGCAATAGCGGGCTATTTGAGAAACGATGTCGCAGTTAGCTGGGGTCGGCTTTCTGTATCTTCAAATCCACAAATTGCTTCCCGATTTTCGTTTTCCGATGAGAGTCACCTCCAATATTATGGTGGAATGGTTAAACCATATTGTGGGAAGAAAAAAAAATTAGAGAAGCTGAAATCGAAGCATCTTCCGCCTCTGAATGATCGGACTCTGTCAGATAAGAGGAGGCTGAATCTATTGGATTGATATCGAAAGATCTCCTGCTTTGGCTACGACCCCAACAGATGCGAAGTGCATCCCTTACAGAGCAAGTCAGAGCAAAAATTCTCTCGGACGCTGTGAATGCGATGATGAGGCAATTAGAACAAGGCAAAGCCGAGCGCAAGGAGAAGAAGCGGCAATTGAAAGCCAAAAAAAAGNTCTGAAATTNAGCTGAAAACAAAGGAAAACAAGGGCGTTGTGAAAATCCTCCNCCCCTCC | |||||||||
gi|34490884|gb|CF473512.1|CF473512 RTWW2_3_B05.b2_A021 Well-watered loblolly pine roots WW2 Pinus taeda cDNA clone RTWW2_3_B05_A TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): GTGGACTACGGCCCGGCGCTTTCCGGCGAGGGTTTGCTACCCCGAGGCGAATTCCACCCACTGGCGGCACTCCACGGCAGCCCAAAATCTCAGAAAGCCTTCATGGCGGACATCGCCTCTCTCGTTTGGAGCGCGACAGGGGCTCTCTTCAGGCCAGCGCTGCGGATTCCAGCTTACTTCGAGACGGAACTCCTTGTCCAGATCGTGCACATTCACGGTACCGAAGTGATCGACACACGGGGGATAGACTGGGGTTCCATTGAAGACACTTTCATGAACGATGCCAAAGGGCTTTTGTTGACTCATCAGTCTTTGAGATTCAAGAGGTACAGTATTCAATACACTAAATGCCCAAGTTGCGTTTCCGCCGTTGGTCGATCTATGAGGTCCTATACGTCTAGGTTTTTGTTTGAGAATTATACTTTGATTGTTAACGAGTATCTGGATTCCAAAATTCTTCACCATTTGCTGTCAGTATCATCGGTGGATTTGGAAACAATTGCCGGGATTACTCATGATCAGACTGCCAGAACCCTGCCTGTTTATGTTTTTGATTTGGAATATGACCGTCCGCTCATGCTAGACCGCTTCCACCAGTCAGTTGCCTTCAGAGACATGGTGATTGCGGTTAGAACCAAGAGTGTTCAGTCCGTGAGCGATTACAATTGTAATGGCCGGCATGTCGTCACTCAGTCACGGAACCTTG | |||||||||
gi|48932495|gb|CO161954.1|CO161954 FLD1_32_F02.b1_A029 Root flooded Pinus taeda cDNA clone FLD1_32_F02_A029 3', mRNA sequence TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): TTCTTTTGACTCGAACAAGATTCAGCTATAATAAAAATTGGAACACTGACATGCAGGGCTTAGGGCACATAACAGTTGTTAGCAAGCCCAAAACAAATAGAGAAGAGAAAATTGTTAGAGATGAAATAGGTTAAAAGCAAAACAAATTCCATAAACAAGTTGCAGAAAGAGATGATGAGGATAAGTGGAGCTCCCTTCAATCCAAGAAATGCGTGTTTAGTGACAGTACATCTCCTGCGTCATGCACACCACTATCCTGTCATGCAGGTCGATTGATTGATTTGTTCAGGCTGCTGGAGAGTCACGGACAGGGAAGTAGAATGCATGAATCAGCAGCTGAACCACCGCTGCACAAGCTTTGGTTGGACTGAAGGGAGCTCCAACACATCCAAACCTTATTCTTTCTCCAAAAACTATTCA | |||||||||
gi|51495527|gb|CV032702.1|CV032702 RTNACL1_17_G07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_17_G07_A029 5', m TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): AGTCGGCGCGAAGCATCACAAGACGAGATATTGGGCGAGACCCTGCAACAGATGACAACGAGTTGGATTGCTTGTCAAGAACAAGCAAACTTTGTATTGTTTATTATCATATATCATCTTAACTTCTGATTTGCTAGTTTGTTAAAATTTGTTTTTGCAGGGAGCAGGTTTCAAAATTCTTTTTCATTGCCTTAGAATGTTATAGCATAGTCCTCTCCTATAGGTTCTGTCCCGCTATATGTTTTTGTTTCAGGATTTTGTAACGTCAAGACTAACTCTGTTGGTATTTGTTTCTTTATTGTTTTTTCTTGTGTTTGCCTTCATAGATGTTTTAGCTCTTAATTATTATAGTTTGTGGGAGGAATGACGGTATTTCTATGGAATCAGTAATTTCTATTTTTGGTATTTTAGTTATCAGTTTTGAAAGTTTATCAATACTGGTAGGTTTTGGTGTAATAGTAAATTTTTTCGTGGTATGAGAGCCTGGACCCAGGTTCAAGTTGGATTGCCATAACTGAGTTTGACTGGATATACTTCTATAGAATCCTTAACTTTCAGCATAAAATTCCTAATTACAGTTTTAGAAAGTTCACCAAGATCCTAGTTACACGTTTAGAAAGTTTACCAACACCTGCTAGATTTTACGTTGATGTTACGTTAGATTTCTAATATAAAAGGGAGGAGGTTACGGGGAGCTTTCTTCAGTCCAACGAAAGGCCGTATAGGGATGATTCAACTGCTGGTTCATGGACTCTACTATCTT | |||||||||
gi|51496530|gb|CV033697.1|CV033697 RTNACL1_36_C08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_36_C08_A029 3', m TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): CATAATCCAAAATATTATTAAATTTATTCGACACAATAAAAAGATTTTATTCAACACAACAAAGTAAAAAATGGTGATCTTGGTTTGACGGTTGGTTCGAAATTCAACTCCACAGCTGGCCGAAACTGTAGCAGATATTCTATCAATGCAATGGTAATTAATAACTCCAGCTAGACAACACGTCTTTAAAAGCGTAAAAGGTCTCGCTGTTAATTTACCAAGGCCAATATTATCATTCCATTAATACGGTCAACGGGCCGAGTTCGTGCGTCTGTATAAACTGTAAATAGACATGACACTGAGCGCCATAAAGATGACGAGACCAACAAACGAAACAACTAGAGCTCCAACTCCATGGTGGCAGAAGCGATCATATATACCGCAGATTTTTCGCCATTGAGTGTGAGAATTTCCCTTGTATCCAACGTAAGCAATGGCGGTCGCTGCAGAGACGCCCGACGATACCAGCGCCACCATCAACAAATCGGTGACAGAGAGAAGAAAGGCTGACAGTGTAGAGGAGGCGAATTTGCCTGTTACGGAGAAGATGAATGAAAGCAGTGTGTACCCACAGGCAACTGCATTCGCCACTACAAAGAACACGAAGGCAGGCGAATATTGGTATTTGGCAGGCCATGGCCCAACGATGGGAAGTATCACCGTCTGCTTGTTCGTTCCCATTACGATTGCAGCAGAAAGCGTGCAGCCGATTGCCAGCAGCCTCAAGATGAGATCCACCACAAAGAAACTGCGATTAACTCTCTGCGCATCTTCCCCGCCGGACTTATTCTCAGTCTCTGAGTAACCCACCTTCACTTGAGATGCCATTTTTTCTTCACTCTGAGCCCTCTTCAGACCAAGAATT | |||||||||
gi|14189221|gb|BG832579.1|BG832579 NXPV_076_G02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_076_G02 5' TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): ATCACTTCAGGTTGAAGCTGAGAAACCTACTGATAGCTTTAGGACTCTAACTTTGGATATGGATTGTGTCTCAAATCAGCCTAAAGTTGAAGCTGAGAGTAATAAAGNTACATTGAGCTCAGTTATGGATTCTGTTCCAGTTCANNCAGNNNCTGTATCGAGCTCAAATTTGGGTTCCCCTTCAGTTCAACTTCAGCCTCGAGTTGNNNCTGCGAATGGTGATTGTTGTTTGGATAAGCTATCAAATACAGCATTTGATTCCATTCCTTCTGTGCNGGNAACATCTCCAATTCATCAGNCAACAAACAG | |||||||||
gi|48937346|gb|CO166805.1|CO166805 FLD1_64_D07.g1_A029 Root flooded Pinus taeda cDNA clone FLD1_64_D07_A029 5', mRNA sequence TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): TAGCAGCAGCATTTCAGATGGGAGCATAAAGGGATCAGCTGAACTTACCTCCAATTGTTCAATGTCAAAGCCAGCGGCTTCGAGGCGAGAGGCAAGATTAAAAGCGAGGGAACGAGCGAGGAGGAAATCTGCCTCAGCCCCAAATCCTGTCGGATCTCCACCGGCCTTCCAGCAATTGAAGTCAGTGAAGCCTTCTTCAACCAGTCCGTTTAAGAGCTGTTTTCCTTATCCTGTGCCTTCAGTGGAGTCCCACTGCAGCAACGATGATAAACTATGTGGGACTCCCACTAGGGTCCTGTCCGGGATAGACAGTGTTCAGCAACTGTGGGGTTATAATAATATGCCATCTTACACAGAAATATGCGTTCAAGATTCTCATCTGCTCCAAAACATGCCTTCTTATTCCACAGCAGCAATCCAAAAATCTATACAGCCAGTGCCCAGCACCTCAGCTAGTGTTCACGCTGTTATTGAAAGTTCTTGTATTCAAGCCTCAGCTGAAATGGCTAACTCCACTATTCCGTTCGTCCATCCAAAGCAAATTCTACACTTGGGAGGAAACGGAACCCAAGTTCAGACTAATGTATGCTACTCCAGTACTCCGAATATGATTATGAAAAGGGTGGAGCAACAACAGCAGCAACAATCAAACACCCACATTAGGCATTTTGGTTCCACCTTTGCTCCAACTCTTTCTAACGATATATATATCTCAACGTCAAGCCTAGATGGCAGGAGACCCCTTCAGTCCAATATTTCTTCTATAACAAATATAGC | |||||||||
gi|34506555|gb|CF477686.1|CF477686 RTWW3_9_F09.b1_A022 Well-watered loblolly pine roots WW3 Pinus taeda cDNA clone RTWW3_9_F09_A TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): AACCAACAAAAGTTTCTCTTTCTTACTATAAAATTACATAACAAAAAGTACCATAAATGAGTTCAAATCAGCACTTGTTCCTCACTTCGTAGATGAAAATTCCTTTAGTGTTACAAAGCTCTCTCTCCCATAAAAGAGTGTGTCAAAATTACACGAGCAAAACAGCATTTATGCATCCATCATTCTCTGGATTGTTGGTAACCTGAGCATATTTTCCCCACACAACCTTGCCTGCTGGGGTCACTAGACCAAGCTCACTTACATTAACCTCAATTATGGTTCCTTTTGTGATAACACCAAGAGAAGTAAACATAGGACCATTTGGATTTTTCTTCACTCCAATAAGATCAAGATTGAAGGTGCATTTTAGTTCAGGATGTGTAACATGTGCTTTGGTGAAACGCAATCCCATGGGACGAATAAATCGCTCATATTTGGGAGGCTTCCTTGTGAACCCAGATCCCACAAATGTAACCTTTGTGACCATTCGTTTCCACTGTTTGGTTTTTCTTTTGCCAGATCGTATGACACGAAACATTTCATCTTCTGCAATGGGCCTCACCTTGGGAAGAGGAACCTCCCATTTACCAGCTTTCTCCTTTCTTTTTTGCTTGATTGTATTGCTCAGCACCTTGGCACGAGTAGTTGCTT | |||||||||
gi|57882873|gb|CX648044.1|CX648044 COLD1_26_E03.b1_A029 Root cold Pinus taeda cDNA clone COLD1_26_E03_A029 3', mRNA sequence TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): TTCAAATGCATAGTATCAACATCGACAATTCCTCAGAATGGTTTTTCTGAGTGCTGAAGTTTTCAGATTTTTGGAGACTTGAAAATTCCCAAGTGAAATTTCCGTTTCAATTCTGAGAGTTCCATTGCGAAAGCTTCCCTCTGGAGCAAAAATCCCAAATGCTGCGTGTGTCAAATCCTATGAAATTACTATTTCTCAGGGTGTAGTCTGGGTCTGGATGGCAGAAAGAAGCACTGCGGACCCCAAAAAGCTTCCATGGTTTGATCACTATTCCAAGCCTGGATTTCGGGATTTCTCTTCAGTTCATGAGCTTCCTTATGATCACTCCATTCTTCTGGAGAATCTCATGGATCCAGCCCATATACCCATTTCACATGACGGCACAGATCCATCTGCAAAAAGGGAGAATGCTCAACCGCTTGGATTTGAGGTCACAGAACGGACACCCAGGGGATTCGCAGGAAGATGGGGTGAGGCAAGCAATGCCACATTTGCAAACACACTAAGGTTTGAGGCCCCCTGTGTCCTTAGGAATGACAAAGAATATGTTGACAAAGATGGTAATAAGAATTATTCTAGTGCTCTGTTCCTCTGTCGTCCATCAGGACAGGGGAAGTCTATGCTTATAGTTAGATTCGGTAGCACCCAATTCAATTCACGATTCACCTTGATACCAAACTGGGTTATCCACCAGACATCCAACAGAGTCTTTGAACAAGATATGGGATTCCTCTCTTCACAGAATGAGATTTTATTGAGGAAAAAAGTGCCCACCAAGGACTTGTATCTTAATCTAAGGTCCTGTGACACATGGGTCACTGAGTACAGAAGGTGGTTAGATAAAGTAGGTCATGGAATGC | |||||||||
gi|34361364|gb|CF402947.1|CF402947 RTWW1_24_E10.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda cDNA clone RTWW1_24_E10 TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): GGGTGAAAAATTCTAACAAATTGCTTACATAACACGATACAAAAGCAGTTCATATCAGATTGGATTATGAACCCAGGGTTGTGTTACTGCTATGTTACTGCAAGAGGTTTTCTCGTCTTTAATACTATCATCCAAGCTTCAATGCTTGTAGTAAATTCTGAGATGCTCCCTTCAATCCAAGTTTTCCTTGGTCTGGAACTTCTGATTGACCCAGCTTGCCTTTGTCCAAGGACTAAGCAAGATTGTTATTTCCTGATCCAGATCTGGGGATTAGTAGTTTCTTCTTCCACCAAATATTGTTGTATCACATCTTGTTGTTTGGATGGGGTGCCCCTGATTTCTTCTTGTTCTATTTTTGGCTCATCCATGGGCAGGTCTGAGCCATCTAGCTCAACATCACTAATCACATGATGTTCTACTTTGGTACCAACGGAGCAGGTGGATTATGTTGGTAATTCTCAAGTCTATTTCTGTCAGAAAATCTTTGCTGGAGTCCATACCCACACAGTTTGAGCATTCGAGCATATGCAGTGAATCGTGATATTGTGGTTTTTAGTTTCCTCACTTCTGCTGTGGTGATATTGTGGTTCTTAGTTTCCTCACTTCTGCAATAGAAAAAACAGTTCATGTCAGATTGGATTATGAACC | |||||||||
gi|57888039|gb|CX653210.1|CX653210 COLD1_64_C12.b1_A029 Root cold Pinus taeda cDNA clone COLD1_64_C12_A029 3', mRNA sequence TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): ACATAATCAATGGAACTTCAAATTAGTAAACATAGTTCGACAGTACATGAGTACATACAGTATGGATGCTGAAACATTCATATTATACCGTATCGACTTGGTCCTGAAACCCCACCAAAGAAAAGTTCGAAACATTTTTCTCGGGACTTTCCTTGAAACATTTGGCAGTGAAAGTGGAAGAATAGTGGTAAGTCGATTTCGACATGAATGCCTTGAAGCTTTCTTCAGTTCATGGACACCACAGTCGGTTAGCTTAATTGGTTCGGCCTTGGACCCCAATTGCTGGTTTTCATGCCCCTCCAGTTGCATTCTTTTAACAATCCGAAGAACGATTTTGACCCATGGCATGGGTCTACAATACAACCCATTTTACGAGAGATTTCCCACACAACAATTGCAGAGTACACGAGTCTAAGCAAATGCCTTCTGAGTTGAACCATTGGCGCATTGACTTGCAGGAGGGAATTTGGGCATTAATCCCCTGACTGGATCACCCCTCTCGAGCAGAGAACCGGCTATGGCTACAGATAGGGCTGCAGTGAAGTTGGGATCTGCCTTTATAGAAGCCACATAATCCTGCAT | |||||||||
gi|74159222|gb|DT629154.1|DT629154 EST1155724 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PIMD621 5' end, mRNA TTGGACTGAAGGGAGCTCC EST sequence (targeted fragment marked with yellow): ACGCGGGGATCATCGTTTGGTTTTTTGTATGCATTTTTACAATTTCCTATAGAAGAAATCCTTTGCCATTCCCGATTCATTAGGACTCAGACTCTGTCCCTTAGGCATTGGGTGATTTATGCATGCAGTTTTCATGGTGGTTACAGAGAGCTAGAGGAAATTTTGCGTATATTGGGTGTTTCGTTGAGAACAGCAGCAGCCATGGGTGCCCCAGTTTTCAGAAGCTGCCTTCAGTCCACTCTGAAGATATTGAACTCTATCCTAACCATGGTTGGGTTAGCAATGGTGTTGTATTCTCTGTGGATGCTCAAGGAATGGAATTCGCAGGAGAACGCATTAAGGCCTGGCAGTAGTCTGGTGGGCAGGCCTTTTCCGGGATTGCGCTCTTCTTTTGGCCATATGTATGTTTCTTCTGATCTGCCTCCTCCCTGGTTTATCTACACATTTCTTGGTATGGGCATTGTCTTGTGTTTGATTACATGCTCAGGTCATATTGCTGCTGAGACTGCGAATGGACACTGCCTTTCTTGTTACATGTTATCTGTTGGCTTGGTTTTGATAACTGAGGCAGGGGTCACTGCCGATGTTTTCTTCAATAAGAACTGGGAAGAAGATTTTCCAGAGGATCCTACAGGACAGTTTGACCAAGCAAAAAAACTTTGTTAGAGAAAACTTTGACATATGCAAGTGGATTGGCTTGATTGTTCTTATTTTGCAGGTTCTATCTGTCCTCGTTGCAATGATTCTTCGAGCTCTGGGGCCATTCACTGGAAATGACGATGATAGTGATGATGATTATATAT | |||||||||