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mature miRNA: TGGAGAAGCAGGGCACGTGCA
species: Pisum sativum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|261235146|gb|FG529722.1|FG529722 MERIP0002N16.B MeriP Pisum sativum Shoot apical meristem ESTs Pisum sativum cDNA clone MERIP

TGGAGAAGCAGGGCACGTGCA
|||||||.||||.|||||||
ACCTCTTTGTCCTGTGCACGA

EST sequence (targeted fragment marked with yellow):
TACAGAAGCTGGTTATTGGAAAGCAACAGGGAAAGATAGAGAGATTTACAGTTCGAAAACCTACTCTCTTGTTGGTATGAAGAAAACCCTTGTTTTCTATAGAGGAAGAGCACCTAAAGGTGAAAAGAGTAACTGGGTGATGCATGAATATCGTCTTGAAGGCAAATTTGCCTACCATTTCCTCTCTAGAAACTCCAAGGATGAATGGGTGATATCACGTGTTTTTCAAAAGAGCAACACCGGAAACGGAAGCACCACCGTGACAGCCACCGCAAGTGGTTCAAAAAAGACCAAACTGGTTTCAACCACCTCTGCAAGTAACAACAGTATGAGTCTTTGCGCTGAACCAAGTTCACCTTCTTCGGTTTATCTTCCACCACTACTTGATTCATCTCCATACTCCAACAACGCCGCTGCTAGCACCACCGCATTCAACGGCGGTCAAATGTGTTCTTACAACAACAGCTCCAACAACACTGATCTAAAGGAGCACGTGTCCTGTTTCTCCACATCATCTACAACATCAAATGTTGTCTCTGGTCACAACAACTTTAGCAACAACAACAATGGTAGTTTTGATCTTGTTCCACCTTCTATGAATGCCGCAACAATGGATCCATTTGCAAGGTTTCAGAGAAATGTCGGTGTTTCT



gi|261232112|gb|FG529720.1|FG529720 MERIP0002N15.B MeriP Pisum sativum Shoot apical meristem ESTs Pisum sativum cDNA clone MERIP

TGGAGAAGCAGGGCACGTGCA
|||||||.||||.|||||||
ACCTCTTTGTCCTGTGCACGA

EST sequence (targeted fragment marked with yellow):
TACAGAAGCTGGTTATTGGAAAGCAACAGGGAAAGATAGAGAGATTTACAGTTCGAAAACCTACTCTCTTGTTGGTATGAAGAAAACCCTTGTTTTCTATAGAGGAAGAGCACCTAAAGGTGAAAAGAGTAACTGGGTGATGCATGAATATCGTCTTGAAGGCAAATTTGCCTACCATTTCCTCTCTAGAAACTCCAAGGATGAATGGGTGATATCACGTGTTTTTCAAAAGAGCAACACCGGAAACGGAAGCACCACCGTGACAGCCACCGCAAGTGGTTCAAAAAAGACCAAACTGGTTTCAACCACCTCTGCAAGTAACAACAGTATGAGTCTTTGCGCTGAACCAAGTTCACCTTCTTCGGTTTATCTTCCACCACTACTTGATTCATCTCCATACTCCAACAACGCCGCTGCTAGCACCACCGCATTCAACGGCGGTCAAATGTGTTCTTACAACAACAGCTCCGACAACACTGATCTAAAGGAGCACGTGTCCTGTTTCTCCACATCATCTACAACATCGAATGTTGTCTCTGGTCA



gi|261231933|gb|FG529541.1|FG529541 MERIP0002H01.B MeriP Pisum sativum Shoot apical meristem ESTs Pisum sativum cDNA clone MERIP

TGGAGAAGCAGGGCACGTGCA
|||||||.||||.|||||||
ACCTCTTTGTCCTGTGCACGA

EST sequence (targeted fragment marked with yellow):
CCATCAACACTGATTTAAAGGAGCACGTGTCCTGTTTCTCCACATCATCTTCAACATCAAATGTTGTCTCTGGTCACAACAACGGCTTTAACAACAACAATGGAAGTTTTGATCTTGTTTCACCTTCTATGAATGCTACAACAATGGATCCATTTGCAAGGTTTCAGAGAAATGTCGGTGTTTCTGCTTTTCCAAGCTTGAGATCACTGCAAGATAATCTTCAGCTACCTTTCTTTTTCTCCACTGCGGCGGCGCAGCCTTTTCACGGTGGTGATGTTCTTGGTGGGTGGGGTATGCCGCAGGAGGAGCAAAGGGCGGTGGTTGACGGTGGTGGTCATAACATGGGAGGGTTAGGTTCATCTGAGCTTGATTGCATGTGGAATTATTAATTAAGGATTATAATGATTAGTAAACTTAATTATTTGCATTATTAGGATTAACTTTTCCTATATTGACATGTTTGGAATGTACTAGATTGTTGTTAGTACTACTACTAGGTCATGGGTTATGTAAGGGTATTTTTGGAATTATGTGTTTACGGAGCCATGCCATTGGGGTACCT



gi|261229434|gb|FG536352.1|FG536352 MERIZ0007M04.B MeriZ Pisum sativum Shoot apical meristem ESTs Pisum sativum cDNA clone MERIZ

TGGAGAAGCAGGGCACGTGCA
|||||||.||||.|||||||
ACCTCTTTGTCCTGTGCACGA

EST sequence (targeted fragment marked with yellow):
ACAACACTGATCTAAAGGAGCACGTGTCCTGTTTCTCCACATCATCTACAACATCAAATGTTGTCTCTGGTCACAACAACTTTAGCAACAACAACAATGGTAGTTTTGATCTTGTTCCACCTTCTATGAATGCCGCAACAATGGATCCATTTGCAAGGTTTCAGAGAAATGTCGGTGTTTCTGCTTTTCCAAGCTTGAGATCACTGCAAGATAACCTTCAGCTGCCTTTCTTTTTCTCCACTGCGGCAGCGCAGCCTTTTCACGGTGGTGATGTTCTTGGTGGATGGGGTATGCCGCAGGAGGAGCAAAGAGGGGTGGTTGACGGTGGGGGTCATAACATGGGAGGGTTAGGTTCATCAGAGCTTGATTGCATGTGGAACTATTAAATAAGGGTTTTAGATTAATTAAGGATAAGTATGATTAGTAAACTCAATTATTTGCATTATT