| mature miRNA: TCTAGAACTCGAGATATGGGC species: Populus euphratica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|50071734|gb|AJ780059.1|AJ780059 AJ780059 Populus euphratica root 3-6 months Populus euphratica cDNA clone P0000800011C09F1, m TCTAGAACTCGAGATATGGGC EST sequence (targeted fragment marked with yellow): GGGGAGAAAAGCTGGGGGGAAAAAAACCCTAATTAAAGAATCGGAGATTCAAAAAAATCGAAATAAAAAGTAAAAATGTTTCCAGGATTGTTTATGAAAAAACCAGACAAAGCAGAGGCTTTGAAGCAGTTAAGGTCACACGTGGCCATGTTTGGTGCCTGGGTTGTTGTGCTCCGTGTCACTCCTTATGCTCTTCATTACCTCTCTCATGAAAAGGATGAGCTCAAGCTCGAGTTCTAGATCCCACCGTTCTTTCTGAAGTGGTCCTGGAGGAGACGAATTCTGTTGAGATGAAGATGAGTGTCCGAGCTCTATCTATTTTCTTTCCTTATTCTTCAGCTGAAAGCACGTGAAGTTATCTTGTACTTGCATTAGGCCATCTTTTCTAGCTTNATGATTTTGGAGTTTCAATACTGTGATATTATTTAATGGCTGGTTGATGTATTTATTCCGCGGAATATACTTAGGTGAAAGAATTTTATTTCTTAGGAGGAATGTTTTACGTGTTATTTTCTGAATGGTGTTCTCTGCCCGGAGGCCACTTTGGGCATACAATATTAAGCATGTTACAAAAAAAAA | |||||||||
gi|50065196|gb|AJ773521.1|AJ773521 AJ773521 Populus euphratica shoot 3-6 months Populus euphratica cDNA clone P0000300003C05F2, TCTAGAACTCGAGATATGGGC EST sequence (targeted fragment marked with yellow): ATCAAAACCAAAAGGAAAATAGAAAGAGACAATGTTTCCAGGAATGTTTATGAGAAAACCAGACAAAGCAGAGGCTTTGAAGCAGTTGAAATCACACGTGACCATGTTTGGTGCCTGGGTTGTTGTGCTCCGTCTCACTCCTTATGTTCTTCATTATCTCTCTGATGAAAAAGATGAGCTCAAGCTCGAGTTCTAGATCCCTTCTTTCTTTCTTTCTTTCTAAAGGGTTCCTGGAGGAGACGAATTCTTTCGAGATGAAGATGAGTGTCTGACCTTCTATCTATTTTCATTCTTTTTTCCTTCAGATGAAAGTATGTGAGGTTACCTTGTCCTTACATTAGGTCATCATTTCTAGCTGCTTATGATTTTGGAGATTCATTACTTTGATACTAAATAATGGCTGATTCAGGTTTTAATCCATGGAATGTACTTTTGGTTTCAAAAAAAAAAAAAAAAAAG | |||||||||