| mature miRNA: TAGAATTGCAGTGCCCTGATT species: Populus nigra database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161919987|gb|DB909931.1|DB909931 DB909931 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TAGAATTGCAGTGCCCTGATT EST sequence (targeted fragment marked with yellow): TCGAGAAATGTCTGAAGATTCCATTTATTGCAAGACTTAAAACGAAGAAGGATGAGAAAGGAAACAATAGATTCCATCTAATTGCTGCTTTAGCGCACGAGAAGAAGCATTGGAGACGTGTTTTCGATGACAGGGAGATATATGGTCTTAATAAGCGAAAGCGAAGCGTCAAGGACATACATTTCGGAGATTTAGCAGAGATAAAGAAAGAGATCCTAGAATCCCTTGAAGATATTGGCAGTGGACCGATTGGTCCCTTTGTTTTGAAAGGAGAGGAAGAGAAAAACAATGATGAGGAAAACAAAGAGGAAGAGGAAGCTTTGAGTAGAGCAAGAGAGTCTCATTTAGTTGTTGCGGCGCTGATAGCAACGGTAACATTTGCATCAGCATTCACCCTACCTGGCGGTTATAAGAGCGACTGAGGCACTGCAATTCTAGTTAAAAAAGCTGCTTTTATAGTATTTGTCATCTTAGATGCAATGTCAATGGTGCTCTCTATTTTTGCCGTCTTTATCCACTTTTTAATTTCGCTGAT | |||||||||
gi|161914228|gb|DB898148.1|DB898148 DB898148 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TAGAATTGCAGTGCCCTGATT EST sequence (targeted fragment marked with yellow): ACTACAGTTGAATGATTTTTAATGGATTCATTATAAATTTTTCAAGTCAGTCAAATGTTTGGAGTAATATAAAAACGAGCCTTATTACAGATTGTAGACTTGATAACCAGGATTGGAATTTCAAACTTTCTTAGTATAAAATTTCAAGCTGGGAGTCTCTCGTGAACGAAGGAGGCCCTAATCAGGGCACTGCAATTCTAAAATGTCTGTTGGCAAGTGGCGATGCTAGACGTTTGAAATTTACATATCATTTATTAGTCAGAATTGCAGTGCCTTGATTTGGGCTTTGTTTGTTCCTGTAACCGCCATGCTAGGGGAGGGAAATGCTGCTGCAAATGTGACCGCTGCTACTGTTAGGAATGAAAGAGATGCTGCAATCTTCGTGAGAGATCATCAAGTCGGCTATAGCTGAACTATTTTCTATGAGATCATCAAATATGCTATTTTGTTGGGGAATCATTCAGCAGATACTATGAAGTTGCTTATGTTATTAGCTTTTTCTTCAGGGAGAATCTTATCATGTGATTGTGATCCCTATTTACATGTAGTGGTATATATACTGCCTATTTAAGAGAACTTTTTTTGAATAAGATGGCAAGTTTCA | |||||||||
gi|161914649|gb|DB898671.1|DB898671 DB898671 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TAGAATTGCAGTGCCCTGATT EST sequence (targeted fragment marked with yellow): TTTTCATTTGGATTGGTTTTATTAGAGCTAATAACAGGTCAAAGAATCAGCATGCTGCAATTTTACAGGGGACGGAATTTTTTGTCCGACTGTTTCCATCCTGTTACTGCATTAGAACCAAGTCATGTCATGGAAAGTATTTATCAATTACTGGATCCATGTTTGGCCTCAGAGCAACTCCCTGAATTTGCCTGTCAACTACAAGCTATGGGCCTTGCCGCTTCCTTGTGCCTCCGTCAAGATCCAGAAACCAGACCTCCAATGTCAAAGGTCCTTGGAATACTTGAGGGGGGTGACTTGGCCGTTCCTCTGAGTTTAGACGTGAATTCAGCTGGTAATAGAAGTGGCCGTCTGCGTGGTCTGAGCTCAGGCACACAGCCTGACAGAAGGAGGGGTCATTCTCGTAAGCTTTCTCATTGAAAATTGATTTTGTAGTAGTTAGCACCAACCAATATGTATAATGATATCGGCTCCGCGTGAGATGATCTTCTGTTAAATGTATATATAGTTCAGAACGGTTCAGTTCTTCCATAGGTGAGTTGCTTTCCCAGTTTCAAACATGTTAATGGTGACATGATTCGTTTTCTTTTCCCCGTCGATCCAAACTTCTGGTTGTAAAGTGTGCTCCGTTAATGGTAGGACTGTGGATCAGGATTTTACCC | |||||||||