| mature miRNA: TCGATAAACCTCTGCATCCA species: Populus nigra database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161906871|gb|DB879902.1|DB879902 DB879902 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TCGATAAACCTCTGCATCCA EST sequence (targeted fragment marked with yellow): GAAACACTCCTTGGCAACCAAATTTCACAACGCAAAGTTGCACAAAGAGAAGAAAGCGGTGCACTCCTCTTACTTCTCCATTTCTTCAATCGTATATCCATGGCCGTGCTGATTTGCAGCAGCAATGTCAACTTAATAAAGCCTCGCCTTCTCTCTTCGCCTCACCACCACAAATATAAGCAACGTCGTCTAATCCGTACCTGTAGGAACATCGTCCGTTTAGACACCGGTACCGGATTTCAATTTTCCCTTCATAATAATAATAATAATAGAAGAAGACCGCTTCCCCCAAAATCTTCATCTTCTTCTTCATCATCATCAGTAAACGGCTATGGCAGTAACATAGAACAGTATTATGGCAGCGAGCAGCGGGTGGAGAGAGAGGAAGGTGTTGAGTTAAACGAGAGGATTCGGAGATTTATCGAGTTTCTTCCGTCAATTTTGCCTGGAGGAAACTGGTGGAGCTTTTCTGATGAGGCGGATATTAAAATTTTGGCCAAACCGGTCACCGTGTGGCGTGCACTTACTCGCATGTGGCACCTT | |||||||||
gi|161915537|gb|DB892960.1|DB892960 DB892960 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TCGATAAACCTCTGCATCCA EST sequence (targeted fragment marked with yellow): CCATATCAACACCTCCTTAGGGTTTTGCCTCTCCTTCTCTTTCAACCTTTTCGGTTCATTTCCAAGAGATAATCAGAGTAAAATGGCTTCTTCAACTGCCCAGATTCACGTTCTTGGCGGCGGCGGCGGAATTGGTGGAACATCTTCGATAAAACCCAGGTTTTCTTTTGCGCCAAGATCATCAGTATTCTTTGGTCAGAACCTTAGAGGAACCACAGCTACTTCCTTAAAACATACAAATAATACTTCAAGAAGAAGGTATAGTACAGGCCCCGTTAGGGTAGTGAATGAGAAAGTAGTTGGGATTGATCTGGGGACCACCAATTCGGCAGTGGCGGCGATGGAAGGAGGGAAACCCACGATAGTTACAAACGCGGAGGGGCAGAGGACTACGCCATCGGTTGTGGCGTATACAAAAAATGGGGATAGGCTCGTGGGGCAGATTGCAAAAAGGCAGGCGGTGGTGAACCCGGAAAACACCTTCTTTTCGGTGAAGAGGTTTATTGGGAGGAAGATGAGTGAAGTAGATGAGGAGTCTAAACAAGTTTCGTATAGGGTTGTGAGGG | |||||||||