| mature miRNA: TGTTGGTAACACCAATTGGGT species: Populus nigra database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161905685|gb|DB908285.1|DB908285 DB908285 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TGTTGGTAACACCAATTGGGT EST sequence (targeted fragment marked with yellow): ACCCCAACGAGCGTCTTGATGGCTGGACCGACATTGCCACCGTCGTTGTAGTCTGGGCTTACTCCATTGGTGTTACCATCATCATCGCCATTGTCTACTTCCTCCTCAACCAGATCCCCTATCTCCAGAACCTCGGTCGCAAGAACCGCAACTTGCACGACACCAAGATGGAGAACATCATCGCTGCTCTCTCCAAGATTGCCCTCGTTCACGAGAAGGATGATGCTACTGGTGGTGACCGCTGGCTCCTTGCCGCTAAGACCGAGGATGATGATGAGGATTAGATCATGCTTTGATGCTCATTTCGCCGGAGTTCTTTATTAATTTTTTCTTTTCTTCTTCTACATAAAGTGTTTATACCACACACACTGCCCTTAGACGCAGAATAATACCCAAACCAAAATCATTT | |||||||||
gi|161928069|gb|DB905882.1|DB905882 DB905882 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TGTTGGTAACACCAATTGGGT EST sequence (targeted fragment marked with yellow): CTCCTTGATTGATTGTCCATCTCAGAGGAGCTCGGTAATTTTAACATGACAAAAAAGGAAGAAAGGAGCATTATGTTGGTAACACCAATTGGGTAGTTTGCTTCTTTAAAGGACCAAGGATTGGGATTTGTCATGGAGAGAGATTTCCCTATTTTTCGTGTTGGTGGTGCCTTTCTTGATTTTAATCCGTGAAACACCTTCAAGATGGCAGAAATGGTCCTTTAAAGAAGCAAACTACCCAATTGGTGTTACCAACATAATGCTCCTTTCTTCCAATTTGGTGGTTGCATTTTTACCGCTGTTCTTTTCGTTGCATTGCAACCTGTACTTTATTCTGTAAATTTGAGTTTTTTTTTTTTCCAACTCCCTTAGAATGTGTTAC | |||||||||
gi|161911316|gb|DB886787.1|DB886787 DB886787 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TGTTGGTAACACCAATTGGGT EST sequence (targeted fragment marked with yellow): AATAGCAAATTTTCTACACCAACCAACTTTCGGTTTACAATTAATATTTCCTTCTCGGCCGTTTCTCTTTAAAACCATTTGGTGTTAGCAACAGTTTTGCAGGATAAGTGAAGTTAATCAAAATGATCAGAGGCGAGGACTCGAGGGGTGCTTATTCTGAGAACAACTCGGACACAGAAAGCGTAGCAAGCGACAAAACAGCTTTCAGCGGGCCATTAGGATCAGGAGGAGGAGGACCTCTCAATAAAAAACGTTCTTCAAGGAAGAGCGCGAGGTTCAATATTCCTCCTGAAACCATTGTAAATTCCGGTGTTCCTGATGATCCATCTTCCTATGTAGAGATTACTTTGGATATTCGTGAAGATTCTGTGGCAGTTCACAGCGTTCAGGGAGCTAATGAGGATCCCGAATTGACTCTGCTGGCGAAGACTGCGCTGGAGGGTAACAATTCCTCTTCGCTGCGGTCTTCGCTGTTTAGGAACACATCATCCAGAATCAGACAGGTCTCTCAGGAGCTAAAACGTTTTGCTTCTTTATCAAGAAGGACATCTACTAGACGGTTTGATAGGAATAAGTCAGCTGCTGCTCATGCCTTGAAGGGACTTAAGTTCATTACCACCAAAAC | |||||||||