| mature miRNA: TTTTCCGGAAACCACTTTCTG species: Populus nigra database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161927052|gb|DB882985.1|DB882985 DB882985 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TTTTCCGGAAACCACTTTCTG EST sequence (targeted fragment marked with yellow): CAAATCCGCCACACCCTTCTCTTCTTCCATTCTCCTCTATCTTTCTCCGAAAAAAAAAAACTCGAAGGAGAGAGCATTTCTGTTTCGGTTAGATCGGGTCTCTCGATTTCGGGTCGGCCCCGATCCGGTTTTTCTTTAAGGGTTAATTGAGTTTTGAAGATCGACAATGGCCACCGAAACCAAACTCGAGAAACGATTGGAGCCAAACCCTGTTGTTGCTAAACCAGTTGACAACAATGTGGTTTCTGGAAAAGATGGAATGCAATCAGATTCAACTCCCACCATTTTGTCATCTGGGAGTGGTGCTTCTGACACCAAAGTTAATGGTAGTGCTGCATCTACCACCAAAAAGGAGGATGATCAAGAGCCACATGCTGCCTTTGTACCCCCTACTAGTAGTTATAATTATCAATACCCAGGCTATAGTGGGTCCTTCACACAATTGGATGATCATGGCTATTATCAAGCAGATGGTTCTCATATAGGTATGCAATCAGATAATGGTTCAATGGTTTATTATTGGCCTAGCTATCCATATGCTTCAGGGACGGTAGTTGGTGTTGAGGGGCAAAGTGTTGCTCAACAGCCATATTATTCTTCCTCTGGTTATCTACAGCATCCTGTGTCCTAT | |||||||||
gi|161929018|gb|DB901069.1|DB901069 DB901069 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TTTTCCGGAAACCACTTTCTG EST sequence (targeted fragment marked with yellow): AGAAGAGATAACCCATTGTGCAGCTGGAGTGAAGTGGTTTAAGTATCTATGCTTGAGGTCTAAAACTCCAGCTTTAAGTAGAGACAGCTTGTCATCTGAAGAAAATGGAGACAAGGAAACTGAAATTTCTACGGAGGGGAATGAAGAGGTGATTCAGAAATTTCATGCTATAGTGAGAACACACTTCAGAGGACCATTGAAGCCTCCCTTTAACGAGGAAGCAAGGAAAGCTGCTGGATTTGGTCCTCAATGGTATGAACCTCTAGCTGTCAAAGAGGTCCAGAATAATCCTAGTACTTAAGGCTATGTTTGTTTCTTGAAAAGTAGTTTTTGAAAATTATTTTTTAAATTTTCCTGTGTTTGTTTGCCATTAGAAAAGGTGGTCAACGGAAAACACTTTCTGGTTAACGAAAAACACTTTCCAGTCAAAGAAAAATTTGACTTGGTTTCCAAGAAAATATTCTCTTTTGGCTGTGTTTATTTTTCAGAAAGTGGTTTCCGGAAAATCACTTTCTAAACTTTCATGTGTTTATTTGCTATTAGAAAAGTTGGTCAAT | |||||||||