| mature miRNA: CCGATTCTGGACTGGGCAGC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|60704995|gb|DN494805.1|DN494805 M127F05.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone M127F05 5', mR CCGATTCTGGACTGGGCAGC EST sequence (targeted fragment marked with yellow): TCGGGGGCACCAACGAGGCCATGCTTGTTATTGAAGCATACCGGACCCTCCGTGACCGTGGCCCATATCCAGCTCACAAGGTTCTTCAGGATATGGATGGCAGGTTTGGATTTGTGGTCTATGATAGCAAGGCTGGACAGGTCTTTGCTGCACTGGGTGCAAATGAAGGTGCTGAGCTATTCTGGGGGATTGCAGCTGATGGGTCACGTTGTAATTTCGGACAACTTGGAGGTGATAAAGGGAAGTTGTGCTAAATCATTTGCTCCATTTCCATCGGCGTGCATGTTCCACAGTGAACAATGCTCGATCAGCTTTGAGCATCCAAGTAACAAAATGAGGGCATTGCCTACGATTGACAGTGAGGGAACAATGTGTGGGGCTAACTTCAAGGTTGATGTCCATTCCAGAATTGGCACTATGCCTCGTGTTGGTAGTGAAGCCAACTGGGCTTTGGGAGGTTCACGAGCCTAGCTAATCAACTCTCCAAGGGATATTGTGATGACTGATGATTCCTTTTTTACTCT | |||||||||