miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CTTCCCTGTTTCAGGTGGCGG
species: Populus trichocarpa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|73893445|gb|DT496183.1|DT496183 WS01122.BR_K16 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01122_K16 5', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| ||||||||||||| .|
GAAGAGACAAAGTCCACCATC

EST sequence (targeted fragment marked with yellow):
GGGGGGCAATTTTAAAAGAAAAAAAAAAGAAAAACCTAACCCTAAACCTATCTAAGCCAATCAGCCGCCCCCCACCCGGTTTTGATTTTCTTTCTTCGAAACCAGCCGCCCCACTCCCATTCACAGATACAAACCAGCCGGCGGCGCCCCCCCTGGATTTGGTTTCTTCTTCCTTCAGCCTCAGCCCAAACACAGCCGCCTCTCCCTCCACACCGTAGCCACATCTTCTTCTTCCCTTTCCCTGTTTTGATTTTGTTTCTTCCAAGTCGCCGCTCACAGCCTCACATCACACAAAACACAGCAGCCACAGCCACACCGTATCCCATCTTCTTCTCCCTGACACCCATCGCCCCATCTCCTTCTTCACCCGAGAGCCCCTCTCTCTCAAGCTCTTCAATTTCCCTCCATCAAGCCACACAGCAGCAGCAGGAGTCCCGTTCACAGCCTCCTCCCACCGAAGAACCCAGCGGCACCCACAGACGTCGTCCCCTTCCTCATCCACCAGCTCTCCTTTGCACAGACCGGCCTCCGGCGCTCCTTTCACGGCCGCCGCCAGATATACCAAAAGGAGCGAAAACCATCAGCGCCTGGACCACAGCGGCGACACCTCCAACTCCGCTACCACCTGAAACAGAGAAGAATGAGAAAGCAAAGGAAAAGAACCGATCTGTAGAGAGAAGCAGATCCGAAACGAAGAAGAAGAGAAAGAGAAGCAGATCTGTAAAGGAAAGAAAAATTAAAACCGACTGCCATTTGTGTGTTTTTTTTTTGTTGTTGCAGGTGACGGTGACCCTACCGCCGGCGTAGGAAGACAGAGGAGAAGAAGCCACCTTGACTGCCCT



gi|73870601|gb|DT473339.1|DT473339 WS01229.BR_F18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_F18 5', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
||||||||||||||| ||..
AAAGGGACAAAGTCCAACGTT

EST sequence (targeted fragment marked with yellow):
AAAAAAAAACCCAACTCTCTTGCAACCTGAAACAGGGAAACCAGTTAGTCGGGAACCAAAATCAAGGCTATGGCATCACTAGCAACCTTTGCTGCAGTGCAACCGGCCACCATCAAAGGCCTTGGTGGTAGCTCCCTCAGTGGAACCAAGCTCCATGTTAAACCATCTCGCCAGGGCTTAAGACCCAAAAGCTTGAGGAGTGGTGCTGTGGTGGCCAAGTATGGTGACAAGAGTGTCTACTTTGATTTGGAGGATTTGGGCAACACTACTGGGCAATGGGACTTGTATGGATCTGATGCACCTTCACCATACAACCCTCTCCAGGTTTGACACCATTTTCTGTCAATTCCAATGGTGAAAAGGCCTTATAAAGCAAATTCTTTGAGACATTTGCAGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGATATTGGGAGGCGGCTCCACCCTCGCTTATTTTAGTGCTACAGCTTCTGGTGACATTCTACCAATCAAGAAGGGTCCACAACTTCCACCGAAGCTTGGGCCTCGTGGCAAACTCTAAATTAGTTTAGCATCCTGATCTGTCATCCCTTTGTCTGTATGTTTTCATGCTTTCTTTTGACTTTAAAGGTTGGCGAGTTTGTCTAAATCCTACTTAAGATCCTGGGTTATTAATGCATACATATTTGATTCCTCTGTCATTTCGGGGCATTCCAAAAAAAAAAAAAAAA



gi|52394695|gb|CV235776.1|CV235776 WS01221.B21_I13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01221_I13 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| |||||||||| || .|
GAAGAGACAAAGTCCCCCATC

EST sequence (targeted fragment marked with yellow):
TTTCACGGCCGCCGCCAGATATCCAAAAAGGAGCGAAAACCATCAGCGCCTGGACCACAGCGGCGACACCTCCAACTCCGCTACCCCCTGAAACAGAGAAGAATGAGAAAGCAAAGGAAAAGANCCGATCTGTAGAGAGAAGCAGATCCGAANCGAAGAAGAAGAGAAAGAGAAGCAGATCTGTAAAGGAAAGAAAAATTAAAACCGACTGCCATTTGTGTGTTTTTTTTTGTTGTTGCAGGTGACGGTGACCCTACCGCCGGCGTAGGAAGACAGAGGAGAAGAAGCCAACCTTGACTGCCCTGTTTCCCGGTTGCTTTCGCGGCGGCGCGTGAATCCACGCGCCGCCAGTGTTCATGCTGTTCCAGAATGTTTCCCAGCACTGTTAAGGATTTTTGGGCGTCTGTTTTGTAAATTTTAAATTGTTTGATGTAATTTTTTGTTGAGTTTTGAATCATTTGTGCTCTGTAAACGTGGATGTAAAAGAAAAGAAAAGGAAAGGAAAAGAAAAGAAAATATAGTGAAAATGTATGAGTGTGTTTGTATGTTTAATTTTATGGAAGTTTTTATTTATGATAAAATTGTAAGAAATAAAGAAGAATTTAATAAAAAAAAAAAAAAAA



gi|73870357|gb|DT473095.1|DT473095 WS01228.BR_I24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01228_I24 5', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
||||||||||||||| ||..
AAAGGGACAAAGTCCAACGTT

EST sequence (targeted fragment marked with yellow):
GCAACTCTCTTGCAACCTGAAACAGGGAAACCAGTTAGTCGGGAACCAAAATCAAGGCTATGGCATCACTAGCAACCTTTGCTGCAGTGCAACCGGCCACCATCAAAGGCCTTGGTGGTAGCTCCCTCAGTGGAACCAAGCTCCATGTTAAACCATCTCGCCAGGGCTTAAGACCCAAAAGCTTGAGGAGTGGTGCTGTGGTGGCCAAGTATGGTGACAAGAGTGTCTACTTTGATTTGGAGGATTTGGGCAACACTACTGGGCAATGGGACTTGTATGGATCTGATGCACCTTCACCATACAACCCTCTCCAGAGCAAATTCTTTGAGACATTTGCAGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGATATTGGGAGGCGGCTCCACCCTCGCTTATTTTAGTGCTACAGCTTCTGGTGACATTCTACCAATCAAGAAGGGTCCACAACTTCCACCGAAGCTTGGGCCTCGTGGCAAACTCTAAATTAGTTTAGCATCCTGATCTGTCATCCCTTTGTCTGTATGTTTTCATGCTTTCTTTTGACTTTAAAGGTTGGCGAGTTTGTCTAAATCCTACTTAAGATCCTGGGTTATTAATGCATACATATTTGATTCCNAAAAAAAAAAAAAAAAAAAA



gi|73886169|gb|DT488907.1|DT488907 WS02537.B21_M10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02537_M10 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| |||||||||.|.|| |
GAAGAGACAAAGTCTATCGGC

EST sequence (targeted fragment marked with yellow):
CCATCAACCCCGATCTCCCTCTCCCTCATAAACCCAACCCAGCCACCAGCAGTTAACCTCCCCTCTATCCAGCCACCACTTCCTCATAAACCCTGGATCTGTCCGCCTTGTTCTTCCAGCTCCTCCTCCACTTCCAACTGCTCGACCACAGCCTCTCCCTCTCTCGGCCACGACCAAAAAAATCACCAGCTGCTCAACCATTCTTCCCTCCACCGCGACCCGACTTAGTAAAAACCCAGTCACGCCAACAGCCTCTTGGTCTTACCGCCGGCTATCTGAAACAGAGAAGAAGAAGGCGAAACCAAAAAAAAAAAAAAAAAA



gi|73869265|gb|DT472003.1|DT472003 WS0122.BR_M12 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0122_M12 5', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
||||||||||||||| ||..
AAAGGGACAAAGTCCAACGTT

EST sequence (targeted fragment marked with yellow):
GATGCAAAAAGTTCAAAAACCCAACTCTCTTGCAACCTGAAACAGGGAAACCAGTTAGTCGGGAACCAAAATCAAGGCTATGGCATCACTAGCAACCTTTGCTGCAGTGCAACCGGCCACCATCAAAGGCCTTGGTGGTAGCTCCCTCAGTGGAACCAAGCTCCATGTTAAACCATCTCGCCAGGGCTTAAGACCCAAAAGCTTGAGGAGTGGTGCTGTGGTGGCCAAGTATGGTGACAAGAGTGTCTACTTTGATTTGGAGGATTTGGGCAACACTACTGGGCAATGGGACTTGTATGGATCTGATGCACCTTCACCATACAACCCTCTCCAGAGCAAATTCTTTGAGACATTTGCAGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGATATTGGGAGGCGGCTCCACCCTCGCTTATTTTAGTGCTACAGCTTCTGGTGACATTCTACCAATCAAGAAGGGTCCACAACTTCCACCGAAGCTTGGGCCTCGTGGCAAACTCTAAATTAGTTTAGCATCCTGATCTGTCATCCCTTTGTCTGTATGTTTTCATGCTTTCTTTTGACTTTAAAGGTTGGCGAGTTTGTCTAAATCCTACTTA



gi|73888013|gb|DT490751.1|DT490751 WS02545.B21_N13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02545_N13 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| ||||||||||||||||
GAAGAGACAAAGTCCACCGCC

EST sequence (targeted fragment marked with yellow):
GCAGAAGCATAGTCACCGACAGCTTCTTTGGTCATACAGCCCGCCACCTGAAACAGAGAAGGGAAAAAAAACAGATCTGTAAAGAGAAGCAGATTTGAAAACAAAGAAGAAAAAACTAAAATCAACTGGTTTGTTGCGTTTTTGTTGTTTCTGCAGGTCACCACTAGCGAGAAAAGGAAAAGGGGAGGAAGCCATTACAAACCCCCTGTCTGCGTGAATTCTTGCGGCGGCGCGTGAACCCATATTCCTATTATCCCACTATTCCTATTATCCCTGTTTGCGTGAACCGCTAGTGGCAGTGGCGCCCACTATTCCTATTATCCCAGAAGGCTTCCCTGCAGTTCCTGTATTTTTTTTTTTGGGGGGGGTTATGTAATTTTTGAATTGTTAAGGTCTTGTTTGGGTAATTTTAATTTCTGTTGTTTTGTCACGTAAAAATTATGTATGAAAAAAACATAATAAAAAGGGGGATGTGTGTGTGTTTGTATTTTTTTTTATTTATGTTATTGAATTATAAAATAGAAAAGAAAAAAATTTAATGTTTTAATTTCGATATGATCAAGTATTGTAAAAAAAAAAAAAAAAAA



gi|73893314|gb|DT496052.1|DT496052 WS01122.BR_E09 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01122_E09 5', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| |||||||||||||| |
GAAGAGACAAAGTCCACCGGC

EST sequence (targeted fragment marked with yellow):
TCCCGGGGAGGAGAAAATTTTGAGGAAAAGAGGAGCGGCCGAAAATGAGGGGAAACAAAAGAAAAAACCCTAAACCTCACCCTCTCTGAAAAGGCCGCCGCTCATCTTCTCTTCTCAGCTCTCTGGTCAAAAGACAGACAAGAACCGCCGCTATTAACCTTCAGCCACACACTGTCCCATTCCCCTCTCTCGGCCTTCTTCCCTGCACCCGAAGGAGCCTCCCCTCTCAGCCAAAACAGATCCACCAGAAGCCCCATTTCCTTCACCTCTGCATTCCCCCCCCTTGAACCAACAACCCGACAGACCCGAGACCCCTTCCCTCCTGAACCAGCCGCAAGCTCGCCAAGACCAAAAAGAGGGCAGAGTCGTTCGCCCCTCACTCTCCCCTCTTGCTGGCCGTTTCAGCTTCTTCTTGTCCATCGCCGACCGAAACATGTCTCCCTTCCATTCAGCCTCCAGCAGCAGCACAGACGCGACAGAAACACAGTCGCCAGCAGCTCCTTGGTCATAGCGCCGGCCACCTGAAACAGAGAAGAAGGGGAAACAAAAAGAAAAAACAGATCTGTAAAGAGAGAAGCAGATCTGAAAAAGGGGAAGGAAGAGAAGCCGATCTGTAAACAAAGAAAAACGAAAACAGAATTGCTTGTTGCGTTTTTGGGTTTTTGGAGGTAACGGAGTTGCTCACAGCCGACAGGAAGGTGAAGAGGGGACGAAGCCATTACGGATCTCCACCGCTCTCTGGATTTCGCAGCGGCGCGTGGTTCCTACATTTTCAGAAGTCGTCCTCTGCAATTCCTTATCAGAAACCTTAACCCGGGATACTTTGATATATGCGAGTGTCATGTATCAACATTCTCTATTTACAAAAAAAAAAAAAAAA



gi|73873638|gb|DT476376.1|DT476376 WS01229.B21_F18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_F18 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
||||||||||||||| ||..
AAAGGGACAAAGTCCAACGTT

EST sequence (targeted fragment marked with yellow):
AAAAACCCAACTCTCTTGCAACCTGAAACAGGGAAACCAGTTAGTCGGGAACCAAAATCAAGGCTATGGCATCACTAGCAACCTTTGCTGCAGTGCAACCGGCCACCATCAAAGGCCTTGGTGGTAGCTCCCTCAGTGGAACCAAGCTCCATGTTAAACCATCTCGCCAGGGCTTAAGACCCAAAAGCTTGAGGAGTGGTGCTGTGGTGGCCAAGTATGGTGACAAGAGTGTCTACTTTGATTTGGAGGATTTGGGCAACACTACTGGGCAATGGGACTTGTATGGATCTGATGCACCTTCACCATACAACCCTCTCCAGGTTTGACACCATTTTCTGTCAATTCCAATGGTGAAAAGGCCTTATAAAGCAAATTCTTTGAGACATTTGCAGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGATATTGGGAGGCGGCTCCACCCTCGCTTATTTTAGTGCTACAGCTTCTGGTGACATTCTACCAATCAAGAAGGGTCCACAACTTCCACCGAAGCTTGGGCCTCGTGGCAAACTCTAAATTAGTTTAGCATCCTGATCTGTCATCCCTTTGTCTGTATGTTTTCATGCTTTCTTTTGACTTTAAAGGTTGGCGAGTTTGTCTAAATCCTACTTAAGATCCTGGGTTATTAATGCATACATATTTGATTCCTCTGTCATTTCGGGGCATTCCAAAAAAAAAAAAAAAA



gi|73876315|gb|DT479053.1|DT479053 WS02524.BR_K01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02524_K01 5', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||||||||||||.|||||||
GAAGGGACAAAGTTCACCGCC

EST sequence (targeted fragment marked with yellow):
GAGAGCTCCTCCCTTTTGGTTTTTTCTTCTTCCTCAGCCGCCGGACACAAGCCTTCCCTTCCACCCCCTCTTAGGCTCCCCATTTTCCCTGATTCCTCCTCTGCCCGCCGCGGCCTTTACACCCTGTCTTCTCCAGACGCAGACTTCCCTATTTCCCCCACAGACCAGCCAAGACAGATCCACGGCCTCCCTCCCTGAGCCGGCTCATTTCCCTCCAACCAAAAGGGAGCAGCCCGCAGGCCCTCATCTTCGCCAAGACACGAACAGGCCACCGACAGCTGCACAGACCGGACGGAAACCCAAAGCCTAGCAGCCGGCGGCCCCCTGGGTCTTGCCGCCACTTGAAACAGGGAAGAATGGGAAAGAAAAAGAAAAGAATAGATCTGTAGAGAGAAGCAGATCCAAAACGGAGAAGAAAAGAAAGAAAAACAGACCCGTGTAGGAGAAACTAAAACTAAAACAAATTGCTGTTGCGATTCGTTGTTTTTGCAGGTCACGGCGTCACCGCCGGCAGAGAAGGGGAGAAAAGAAGAAGCGTTTTCAGATCCCAACGTTTCTGGGATGTCTACGGCG



gi|52385988|gb|CV231457.1|CV231457 WS0194.B21_J17 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0194_J17 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| ||||||||||||| |
GAAGAGACAAAGTCCACCAGC

EST sequence (targeted fragment marked with yellow):
GGTTGATATCTCCGCCTCAACACCGTCAGCCACCTCTCCCATCTCCATAGCAGCTCCAGCGGCCGCGGGCGACAGCAGATCTCTTCTCCATCGCCGCCGGCCAGACCCGACAAAAGCCTAGCAGCCGGCGGCCCTCTTGGTCATACAGCCGACCACCTGAAACAGAGAAGGAGAAACAAAAAGGAAAAGAACCGATCTGTAGAGGAGCCGATCCGAAACGGAGAAAGAGACGCAGATCTGAAACAAAGGAAAGAAAAACTAAAATCGACTGCCTGTTGCGTTTTTTTGGGTATTTTGCAGGTCACACTGGCGAGGACGGGAAGAGGGGAGGAAGCTGTGGCTGACCCCTGTTTTTTTTCGGCGTTTTGTGCGGCGGCGCGTGGAGGAGACGCGCCGCCACTGTTCCTACTGTCCTTTGGCTTCACATAACTGGTCCCAGCACTGCTATGATTTTTTTGAATGGCTTGTTTTGTAATTTTAGAATTGTTTGATGTAATATTTGTTTAGTTTTGAGTTTTTTTTTGTAATTTGTATTTTTGTAAACATAAAAAAAAGGATAAGGAAAAAAAAAAAAAAAAAA



gi|73884745|gb|DT487483.1|DT487483 WS02533.B21_N05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02533_N05 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| ||||||||||||||||
GAAGAGACAAAGTCCACCGCC

EST sequence (targeted fragment marked with yellow):
GTTTAGGACAACCATAAGAAAACCCTAAACCTTTCCTTCTCCTCCCAAGCCGCCAACCCCCTCTCTTTTGGCCAAAAGCCAGAGAACCAAAAGACAAGCAGTCGCCGCCCCCTTGTTGGTTTTGGTTTTTGGTCTTTCCTCACCAGCCATCTTCTTCTTCTTCCATAGCCTTCCCCGCTCCTTTCCCTCTCATTGCCTCCACAACACAGGCTCCTCCTCTTACCCGTAGCCCGCCATCACCAGACCTGCCCTCTCTGTAGCTCAGCCTCTCCAATCGTCCCTCTGCCCACTCTGCCATTTTAGCACTTCCCCGACAAAACAGAGGGCTCCTCATTATTTTCCTTTCCCCTCACAACTCCCCCATCTTCCTTCTCCCAGCCCCGACCACAGATCTTCCCTCTCTCTCCAGAACCCAAGCCACACAAAACAACTTTCAGCACCCACATAGACCTTCTCCACTCTACCCACAGTGTCACTCTCCCAGACACGATCCTCCCTTCTCCCTCTCACAGGTGCCGACTCCCATCTCCGTAGCAGCTCTAGCGGCTGCAGGTGACAGCAGCAAAGCCAACCGAAACCGACGACTAGACAACACTCCTTTCTCCTTCATCTCCGCCGACCAGACACGACAGAAGCATAGTCACCGACAGCTTCTTGGTCATACAGCCCGCCACCTGAAACAGAGAAGGGAAAAAAAACAGATCTGTAAAGAGAAGCAGATCTGAAAACAAAAAAAAAAAAAAAAAA



gi|52494226|gb|CV241251.1|CV241251 WS02511.B21_K07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02511_K07 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| ||||||||||||||||
GAAGAGACAAAGTCCACCGCC

EST sequence (targeted fragment marked with yellow):
CACAGGTGCCGACTCCCATCTCCGTAGCAGCTCTAGCGGCTGCAGGTGACAGCAGCAAAGCCAACCGAAACCGACGACTAGACAACACTCCTTTCTCCTTCATCTCCGCCGACCAGACACGACAGAAGCATAGTCACCGACAGCTTCTTGGTCATACAGCCCGCCACCTGAAACAGAGAAGGAAAAAAAAACAGATCTGTAAAGAGAAGCAGATCTGAAAACAAAGAAGAAAAAACTAAAATCAACTGGTTTGTTGCGTTTTTGTTGTTTCTGCAGGTCACCACTAGCGAGAAAAGGAAAAGGGGAGGAAGCCATTACAAACCCCCTGTCTGCGTGAATTCTTGCGGCGGCGCGTGAACCCATATTCCTATTATCCCACTATTCCTATTATCCCTGTTTGCGTGAACCGCTAGTGGCAGTGGCGCCCACTATTCCTATTATCCCAGAAGGCTTCCCTGCAGTTCCTGTATTTTTTTTTGGGGGGGGGGGTTATGTAATTTTTGAATTGTTAAGGTCTTGTTTGGGTAATTTTAATTTCTGTTGTTTTGTCACGTAAAAATTATGTATGAAAAAAACATAATAAAAAGGGGGATGTGTGTGTGTTTGTATTTTTTTTTTATTTATGTTATTGAATTATAAAATAGAAAAGAAAAAAATTTAATGTTTTAATTTCGATATGATCAAGTATTTTAGGAATAAATAAAATCATAAAAAAAAAAGAAAAAAAAAAAAAAAAAA



gi|52497600|gb|CV244625.1|CV244625 WS0255.B21_C19 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_C19 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||||||||||||||||||||
GAAGGGACAAAGTCCACCGCC

EST sequence (targeted fragment marked with yellow):
GCAGCAGCCGGCCTCGCCTTGTCTTGTGAAAAAGAGAGAACCAAAGCCACCCGGCGATTTCCTTCTCCTCTTACCTATAGCCAAACCCAAACCGGCCATTTCCAATTTCTGGTCCCATAGCCGGCCATCAACACAAACTCTCAGTCTCTCCCACCAGTCGTCCCGTCTCTTCCCTCATCTCTCTCAACAGACTCAGCTGCTGCCGTCTCCCCTCAGCATTTCCCTCTCAACAGCTTCACACCCTCTGTCTTCTCCAGACGCAGACTTCCCTATTTCCCCCACAGACCAGCCAAGACAGACCCACGGCCTCCCTCCCTGAACCGGCTCACTTCCCTCCAACCGAAAGGGAGCAGCCCGCAGGCCCTCATCTTCGCCAAGACACGAACCGGCCACCGACAGCTGCACAGACCGGACGGAAACCCAAAGCCTAGAAGCCGGCGGCCCCCTTGGTCTTGCCGCCACCTGAAACAGGGAAGAATGGGAAAGAAAAAGAAAAGAACAGATCTGTAGAGAGAAGCAGATCCAAAACGGAAAAAAAAAAAAAAAAAA



gi|73886782|gb|DT489520.1|DT489520 WS02542.B21_H07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02542_H07 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||||||||||||.|||||||
GAAGGGACAAAGTTCACCGCC

EST sequence (targeted fragment marked with yellow):
GCCTAAACATAAAAAACTCAAGCTTTCATCTTTTTCAAAGGAGCAGCATTCCCATTTTTGCTCCGGCCATGTTCTTCCTTGGACTATCCCTCCTAAACCAGCCGCTCAAGCCCCCTTCTCCACACTGTTCCCCCATCTTCTTCTCCTCTTTCAGCTAACAGCACAGAGCTCCTCCCTTTTGGTTTTTTCTTCTTCCTCAGCCGCCGGACACAAGCCTTCCCTTCCACCCCCTCTTAGGCTCCCCATTTTCCCTGATTCCTCCTCTGCCCGCCGCGGCCTTTACACCCTGTCTTCTCCAGACGCAGACTTCCCTATTTCCCCCACAGACCAGCCAAGACAGATCCACGGCCTCCCTCCCTGAGCCGGCTCATTTCCCTCCAACCAAAAGGGAGCAGCCCGCAGGCCCTCATCTTCGCCAAGACACGAACAGGCCACCGACAGCTGCACAGACCGGACGGAAACCCAAAGCCTAGCAGCCGGCGGCCCCCTGGGTCTTGCCGCCACTTGAAACAGGGAAGAATGGGAAAGAAAAAGAAAAAAAAAAAAAAAAAA



gi|73881438|gb|DT484176.1|DT484176 WS02524.B21_K16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02524_K16 3', mRNA sequence

CTTCCCTGTTTCAGGTGGCGG
|||| |||||||||.|.|| |
GAAGAGACAAAGTCTATCGGC

EST sequence (targeted fragment marked with yellow):
GCCACCACTTCCTCATAAACCCTGGATCTGTCCGCCTTGTTCTTCCAGCTCCTCCTCCACTTCCAACTGCTCGACCACAGCCTCTCCCTCTGTCGGCCACGACCAAAAAAATCACCAGCTGCTCAACCATTCTTCCCTCCACCGCGACCCGACTTAGTAAAAACCCAGTCACGCCAACAGCCTCTTGGTCTTACCGCCGGCTATCTGAAACAGAGAAGAAGAAGGCGAAACCAAAAGAGAAAAAAAAAAGATCTGTAGGGAGAGAAGCAGATCAAAAAAACTTTAAGGAAAGGAAACCAAAACTTGTTGTTGTGTCTTTTCTTTTTCAGGTCTCCATCGGTGACACCGCTGGCTCAGGAAAGGAAGAAAGGAGGAGATCTATCCGATCCCCTCATTTTTCACATTACCGGCGACGGCGCGTGAGACGAACGCGCCGTCACTGTTTCCGCGACCCAGATTTCTAGCACTGTTCCCGACTCCATTTTGTAAGTTTTAAATGTTGAAATGTGTATTTAAATTATTGTTAGCATTGTAAATTTCTGTTGCATTGTAAACTTGTAATTGTGCGCGTTTGATGGGCCAAAAAAAAAAAAAAAAAA