miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: GAGCCAAGAATGACTTGCCGG
species: Populus trichocarpa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|73870695|gb|DT473433.1|DT473433 WS01229.BR_K04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_K04 5', mRNA sequence

GAGCCAAGAATGACTTGCCGG
||.||||.|||| ||.|||||
CTTGGTTTTTACGGAGCGGCC

EST sequence (targeted fragment marked with yellow):
GCTGGAAAGCCTATGACACTGATCCCCATCATCCCACGGACAATCCAAATGGAGTTATCCAGATGGGTCTTGCAGAGAATCAGCTGTGCTTTGATTTGATTCAAGACTGGCTCAAGAAGAATCCAAAAGCCTCCATTTGCAGTCCTGAAGGATTAAATGAGTTCAGAGAGATAGCCATCTTTCAAGACTATCATGGCTTGCCAGAATTTAGAAATGCTGTAGCAAACTTCATGGAAAAAGTGAGGGGAAATAGGGTTGCATTTGATCCTGACCGCATTGTTATGAGTGGAGGAGCTACCGGAGCTCATGAAACAATTGCGTTTTGCTTGGCGGATCCCGGCGAGGCATTTTTGGTTCCTACTCCTTATTATCCAGGATTTGATCGAGATTTGAGATGGAGAACAGGAGTTAAACTCATTCCAGTTGACTCTGATAGCTCTAACAACTTCATGGTTACAAAAGAAGCCTTGGAAAATGCCTATGAGATGGCACAATTAGACAACATTAAAGTAAAGGGCTTGCTCATAACAAACCCATCCAATCCGTTGGGTACCATCCTAGACAGGGAAACTCTACGAAGCATTGTGAGATTCATCAATGAAAAGAACATCCATTTAGTCTGTGATGAGATTTATGCAGCCACAGTTTTCAGCCAGCCTGATTTCATTAGCGTAGCGGAGATACTACAGGAAGATATTGAATGCAATCTTGATCTTGTACACATTGTTTACAGTCTCTCAAAGGACATGGGCTTCCCTGGCCTCAGGGTTGGCATTATCTATTCTTACAATGATGCAGTTGTGAGTTGCGCCCGCAAGATGTCAAGCTTCGGATTGGTATCCACTCAAACTCAGTACCTGATAGCATCAATGCTATCGG



gi|38575797|gb|CK091472.1|CK091472 F102P04.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F102P04 3', mRNA seque

GAGCCAAGAATGACTTGCCGG
.|||||||||||| |||||..
TTCGGTTCTTACTAAACGGTT

EST sequence (targeted fragment marked with yellow):
TTTACCAGCTCATCAAGCTGTGGACCTGTGCTGTCTCACTTCTCCAGAAACTATTATTCGTCAATGAGTAATGATGCGGAAGTAATAGAGTCTCTGTGTCAAATGCACCCTCATCAGACATATATGAGCAAAGGATGCACCCCGCAGTTTCACAGGTATCACCTTTCCAAATTTCCTTCACTTTCAGAAAAGATGGTGGGAGAAAGGGATAACAAATTATGGTGAGTGAGTAGGCCTCTCAATTGAAACTTCCAGCACAAGGAGTTGAGGGTCTCTCCAGCATTGTTAATTGTATGAAAGCCCGTTTAGCTGAAAGGTGTGGTGGATTCTACCAAACTCTGAGAAATCAAGGTGCCTCTTCATTGAGTTTGCTTATTCACTCTTGACACGCAGTAAGGATTTGTTGGGCGTATGTCTTTACCGCTCTATGCTTTCTTGCTTGCATCCTGTTGAAGGTGTTTCTTCGATCATTAGGGATTGTTTATAACCATTTAGAAAAAGCTAGAAACATCGACCCTGACTCACTTGGTGAGGAAGACTATATATCGTTGGCAAATCATTCTTGGCTTATTGTGTTGTCACTTTCTTTTCCTCAGTATTATGTAAAATTAGTGTCGTGTAATCTTGAGAATATCATATCGATCTTTTTGTGAAAAAAAAAAAAAAAAAAAACAACGCGGAG



gi|73887894|gb|DT490632.1|DT490632 WS02545.B21_I01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02545_I01 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.|||||||||||| ||||| |
TTCGGTTCTTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
GGTTCAAGACATGCAAACACACGCTTCCTCCAATTGCCATGGTAATGGCAATGGACTCTCATCAAGATATCATTCATTATCAGATGATGGCAGCTTCTTGGGTCAGCAGAAGGAAACCACACATGGGAATGGGGTGTCTAATGGGAACGTCTCCATTTATTAAATTTCCACCTTGAGTTGCAAAGCTGGAGGCATCAGCCATGTCCAACTTGGGGGGCGAAACTTTCAGCGTGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTTGGGTCTTTGTTACTTGGTGCATGCTGGTGGTGTGAGTGGAGCATATCATATGTTGTGATGGACTTCATGCTGTCTTCAGACTTGAACTAATTGCATCTCTCTTCTTTTCGTCGCTTCTGTAAATATGGCAAAAACTAGTGTATCTACCTTGCAGGAATTAATCCCAAATGTAGTAATTCCAGTGGTCTGCGTTTGAACTTAACTTTCGTGTGATCATTTCTTTATGTGTGAACAGAGGGTTTACCTCATGTACCCTAAAAAAAAAAAAAAAAAA



gi|73879070|gb|DT481808.1|DT481808 WS02533.BR_A01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02533_A01 5', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.||||||| |||| ||||| |
TTCGGTTCCTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
GGTGTGGGTGTGGTGGTCTGGAGAGTTTCAAGAGAGGGAGACATGTCCAACTTCTTCCCTACAGCCTCCTCTTGAAATTCTTTGCTTCTTCTTCAACTACTACTTATTGACTTCCTTATCAGATCCCAAGGATGAAAGTTGTGGGAAGGGCGTGAAGGGAAAAATGAAGCCAGTTCTCTTGTTGAGTACTCCAGATAGCGTGTCTAATCACTCACAAGCTGATTGTAGCTATTCAATGGTTCGTGCTCCATATGCTGATCCTTACTTTGGTGGGCTGTGTAATCCATATGAACTTCATGCTTTTATTCAGCCCCATCTGGGTTCTCATATGGTGGGGATGACAGCTGGACGAGTCCCACTCCCTGTTGATCTTGCAGATGATGGACCAATTTATGTTAATGCTAAACAGTACCGTGGAATTATCAGAAGGAGACAATCACGGGCAAAGCTTGAGGCTCAAAACAAACTGGTAAAAAATCGAAAGCCATACCTTCACGAGTCTCGGCACATTCATGCCTTGAATAGGGTTCGAGGATCTGGTGGACGCTTTCTCAGCAAAAAAAAGCTCCAGGAATCTGATCCCACTCCTAGTCAGTGTAATGTCACAGATACCATCCACTCACACGTAAAGAATGATGCATCAGAACTAGAAAGCTATCAGTCTGGAACCGGACAATCTGGTGCCTCAAATACTACCTGCTCTGACATCACCAGTGTCTCCTACAGCAATGTCACTTTTAGGCAGCCAGAACGCCGGTTCTCAGGTATTGCTACTCACCTTGGTGGAGGCATGGAAATCAACAGTAGGCTTATTTGCAGAGGAACCCAACACCACACTTCCGTTGTTTCAGTGAAATATGGAAGAAGACCGTGTAATCGGTCAGGCAATTCATCCTTGGCTTCGTCTCTTTTAC



gi|73890025|gb|DT492763.1|DT492763 WS02552.C21_E04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02552_E04 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.|||||||||||| |||||..
TTCGGTTCTTACTAAACGGTT

EST sequence (targeted fragment marked with yellow):
GGGGCAAACGAATGCCTTATCTTCACGAGTCCCGGCATCTACATGCTATGAGAAGGGCAAGAGGTTGTGGAGGCCGTTTTCTTAACACAAAGAAACCTGACACTACCAATAATACTGCACCTGATAAGCATACCAGCTCTGATGAAACTGTTTCAAGAAACTTTACCAGCTCATCAAGCTCTGGACCTGTGCTGTCTCACTTTTCCAGAAACTCTGATTCGTCAATGAGTAATGATGCGGAAGTAATAGAGTCTCTGTGTCAAATGCACCCTCATCAGACATATCTGAGCAAAGGATGCACCCCGCAGTTTCCCAGGTATCACCTTTCCAAATTTCCTTCACTTTCAGAAAAGATGGTGGGAGAAAGGGATAACAAATTATGGTGAGTGAGTAGGCCTCTCAATTGAAACTTCCAGCACAAGGAGTTGAGGGTCTCTCCAGCATTGTTAATTGTATGAAAGCCCGTTTAGCTGAAAGGTGTGGTGGATTCTACCAAACTCTGAGAAATCAAGGTGCCTCTTCATTGAGTTTGCTTATTCACTCTTGACACGCAGTAAGGATTTGTTGGGCGTATGTCTTTACCGCTCTATGCTTTCTTGCTTGCATCCTGTTGAAGGTGTTTCTTCGATCATTAGGGATTGTTTATAACCATTTAGAAAAAGCTAGAAACATCGACCCTGACTCACTTGGTGAGGAAGACTATATATCGTTGGCAAATCATTCTTGGCTTATTGTTTGTCACTTTCTTTTCTCAGTTTATGTAAAAAGGGTTCGTGTAATCTTGGAATATCATATCGATCTTTTAGAGATCCAAAAAAAAAAAAAAAAAA



gi|52494504|gb|CV241529.1|CV241529 WS02512.B21_H14 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02512_H14 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.||||||| |||| ||||| |
TTCGGTTCCTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
GTGGAATTCTGAGAAGGAGACAATCACGGGCAAAACTTGAGGCTCAAAACAAACTTGTGAAAAATCGAAAGCCATACCTTCATGAGTCTCGGCACATTCATGCCTTAAATAGGGTTCGAGGATCTGGTGGACGCTTTCTCAGCACAAAAAAGCTCCAACGATCTGATCCCACTTCCTCTCATGGCCAGTGTAATGTCCTAGATACCATCCACTTGCACCCAAAGAATAATGCATCCGAACTTGAAAGCTTCCAATCAAGAACTGGTCAATCCAGTGCCTCAAATACAACCCGCTCTGACACCACCAGTGTCTCCAACAGTGATGTCAATTTCAGGCAGCCAGATCGCGGATTCTCAGGTATTGCTGCTCACCTTGTTGGAGGCAGGCAAATCAATGGTGGGCTTATGAGCAGTGGAAACCAACACCATGCTTCTGTTGTTCGGTGAAAATGCGGAATAAGAAGACCGTGTCACCGGTCCAGGCAATTCATCCTTGGCTTTGTGTCTTTACTTGGTACAAAAAGTGCATGAAGGACACTGTTATGTATTTGATTTCTCTGCTGTTTGCTTTCTTTCTATATATACATCCTCCGTTTGTCAAAAGAAAAAAAAAAAAAAAAAA



gi|73884268|gb|DT487006.1|DT487006 WS02532.B21_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_I12 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.||||||| |||| ||||| |
TTCGGTTCCTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
ATATGGTGGGGATGACAGCTGGACGAGTCCCACTCCCTGTTGATCTTGCAGATGATGGACCAATTTATGTTAATGCTAAACAGTACCGTGGAATTATCAGAAGGAGACAATCACGGGCAAAGCTTGAGGCTCAAAACAAACTGGTAAAAAATCGAAAGCCATACCTTCACGAGTCTCGGCACATTCATGCCTTGAATAGGGTTCGAGGATCTGGTGGACGCTTTCTCAGCAAAAAAAAGCTCCAGGAATCTGATCCCACTCCTAGTCAGTGTAATGTCACAGATACCATCCACTCACACGTAAAGAATGATGCATCAGAACTAAAAAGCTATCAGTCTGGAACCGGACAATCTGGTGCCTCAAATACTACCTGCTCTGACATCACCAGTGTCTCCTACAGCAATGTCACTTTTAGGCAGCCAGAACGCCGGTTCTCAGGTATTGCTACTCACCTTGGTGGAGGCATGGAAATCAACAGTAGGCTTATTTGCAGAGGAACCCAACACCACACTTCCGTTGTTCAGTGAAAATATGGAAGAAGACCGTGTAATCGGTCAGGCAATTCATCCTTGGCTTCGTCTCTTTTACTAAGAACTAAATGTGCACGACGGACACTGTTATGTATTTGATCTCTCTGGGGTTTGCTTTTTTTTTTTTTTGTTTATACATCCTCGGGCATGTCAAAATGGTTGGAAAGAGTTTTGTGTTTGAAACCCATCACTGGGTTACACTGATTGTTAAATATGGCAAACGATGCAAGTGTTTTCTCATCAGATTATCAAATAAAAGATCAGACTTGGGGCTTTGATCTAGCAAACAAAAAAAAAAAAAAAAAA



gi|73887897|gb|DT490635.1|DT490635 WS02545.B21_I04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02545_I04 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.|||||||||||| ||||||
TTCGGTTCTTACTAAACGGCG

EST sequence (targeted fragment marked with yellow):
GATAAAATCTAGAAAGCCATATCTTCATGAATCTCGGCACCAGCATGCTATTAGAAGGGAAAGGAGCTCTGGAGGACGTTTTGCGAAGAAAAGTGGTGATGATGCTTCCAAGAACACATCTGAAAGAAAGCTCAATGGTTCTGGTCCACTTCGTGCATCTCAGTCAGGGAGTTCATCAGGTTCTGAACCATTCTCCTCTGACTCTGTTGAAACTTTGAAATCCTCTGATGGTCAAAAAGAAGCAAGGGCGTCCCAAGTGCATGACACTTTTGAAGCTTATGGGTATGCAAATAGAGATGGCCATTATCAGAACCACCATGGCTTGCAATCCTCTACATATGGCCTGTACTTGGGTGAAAACAAGGACGGAGACCGTTCACGTGAAAACGAGGATGAAGATCATCCAGGCTGGCAGCTGAGGAAGCAGGCCAAAACGTCTTCTGCCCACCAGTGAACCGTGCATGCTAAGTGGATGCCAGGACTGGAGGGTTGATTCACACAAGTAGAGAAACTTGAATCCTTCCCTTATCTGGCAACCACGCACCTGACAATATATTGCCAGGCGGCAAATCATTCTTGGCTTTTTTCATCTTCTTGCTTGTGGCTTGAACAGAGGGAAGAGATGGCGAATCCGTGGTTGGCTTCGTTTGTCGGCCAACGGGTTGCTTGCATCATTATTCTCGTTCTCTCACTTTTTTTCTTTTTCCTGTGTACACACAACTGTCAAGGAAACTCAACTAGAAGTAGTCTGGATAGATTTTAGTCTTATCAGCTCTTTAGTTTAACTTTGAAAATTGAAACTGTCTTGTTCGATCACTTGCAATTCAATGTAGCACTGGTTATTTCAAAAAAAAAAAAAAAAAA



gi|52498514|gb|CV245539.1|CV245539 WS0257.B21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0257_L06 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.||||||| |||| ||||| |
TTCGGTTCCTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
CCATTTATGTTAATGCTAAACAGTACCATGGAATTCTGAGAAGGAGACAATCACGGGCAAAACTTGAGGCTCAAAACAAACTTGTGAAAAATCGAAAGCCATACCTTCATGAGTCTCGGCACATTCATGCCTTAAATAGGGTTCGAGGATTTGGTGGACGCTTTCTCAGCACAAAAAAGCTCCAACGATCTGATCCCACTTCCTCTCATGGCCAGTGTAATGTCCTAGATACCATCCACTTGCACCCAAAGAATAATGCATCCGAACTTGAAAGCTTCCAATCAAGAACTGGTCAATCCAGTGCCTCAAATACAACCCGCTTTGACACCCCCAGTGTCTCCAACAGTGATGTCAATTTCAGGCAGCCAGATCGCGGATTTTCAGGTATTGCTGCTCCCCTTGTTGGAGGCAGGCAAATCAATGGTGGGCTTATGAGCAGTGGAAACCAACCCCATGCTTTTGTTGTTCGGTGAAAATGCGGAATAAGAAGACCGTGTCCCCGGTCCAGGCAATTCATCCTTGGCTTTGTGTCTTTACTTGGTACAAAAAGTGCATGAAGGACCCTGTTATGTATTTGATTTTTTTGCTGTTTGCTTTCTTTCTATATATACATCCTCCGTTTGTCAACATGGTTGAAAAGAGTTTGTCTTTGAAATCCATCCTCTGGTTGCCCTGATTGTTAAATATGGTAACTATGCAAGTATTTGCTCATCAGATTATCAAATAAATATCAGACTTGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAA



gi|73887233|gb|DT489971.1|DT489971 WS02543.B21_K24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_K24 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.|||||||||||| ||||||
TTCGGTTCTTACTAAACGGCG

EST sequence (targeted fragment marked with yellow):
AAGAGAACAACGTGCAAAAGCAGAGGTTGACAAGAAGCTGATAAAAGCTAGAAAGCCATATCTTCATGAATCTCGGCACCGGCATGCTATGAGAAGGGAAAGGAGTTCTGGAGGACGTTTTGCGAAGAAAACTGGTGATGATGCTTCAAAGAACACATCCGAAGGCAAGCTCAATGGTTCTGGTCCGGTCCATGCATCTCAGTCACGGAGTTCATCAGGTTCTGAACTCTTGCCCTCTGACTCTGTTGAAACTTGGAATTCCTCTGAAGGTCAAAAGGAAGCAAGAGAGTCCCAAGTGCATGACACTTTTGAAGCTCATGACTATGTAAATAGAGGTGGCCACTATCAAAAACACAGTGGCTTGCAATCCTCTGCATATGGCTCTTACCTGGGTGACAATGAGGATGGAGACCGTTCAGGTGAAAATGAGGACGAAGACTGTCCAGGCCAGCAACTGGGGAACCAGGCCAAACGAAGGTTTTTTGGCCCACAGTGAACCCAGCATGTTAAGTGGATGCCAAGGTGGAGGGTCCAATTCACGCAAGTAGCGAAACTTGAATCCTCTCTCTTATCAGGCAACCACGCACTTGGCAATATATATTGCCAGGCGGCAAATCATTCTTGGCTTTTTCTTTTTCTTGCTTGTGGCTTGAACAGAGTGAAGGAGATGATGAATCCGTGGTTGGCTTCTTTTGTCTGCCAACGCTTCGCGTGCATCATTATTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCTTTTTCCTGTGTACATAGAACTGTCAAGGAAACTCAAGTAGAAGTAGTCTCTGGTTAGATTTTAGCCAAAAAAAAAAAAAAAAAA



gi|52497152|gb|CV244177.1|CV244177 WS0253.B21_P07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0253_P07 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.|||||||||||| ||||| |
TTCGGTTCTTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
TGAGGCGAAGACAGGCACGTGCTAAGGCAGAGCTTGAAAAAAAGGCAGTAAAAGTTAGAAAGCCATATCTACATGAGTCTCGACACCAACATGCTTTGAGAAGGGCAAGAGGTTGTGGTGGCCGTTTTCTCAATACAAAGAAGCTTGATAACAGCGCTACCAATCCCACATCAGAAAAGGGTAGTGGAGATTTGAATTCCTCTGGCGATCTGGAAGAAGGAAAAGGGTCACAGGCTTCCTCCAATGGTCATGGTAATGGCCATGCACTCTCATCAAGATATCATTCATCATCACATGATGGCAGCTTCTTGGGTCAGCAAAAGGAAACCACACACGGGAATAGGGTGTCTAATGGAGCTGTCTCCATTCATTAAACTTCCACCTCGAGTTGTACGGGGCCTTCAGCATTGCTACATTGGTTTGATTATTAACTCCAATAGAGACATCGTTTAATTTCCTTTTTCTCCTGGCTAGTCTTTGTATCTTATGGAAGGGTTTGCCTTCTGCAGGAAAAGCTGGAGGCATTAGCCATGTTCAACTTGGGAGGAAACCTTTCCTGTGCTGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGGTCTTTGGTTACTTGGTGCATTCATGGTGGTGAGAGTGTAGTATATGTGATGGACTTCATGCTGTCTTCAGACTTGAACTAATTTCATCTCTCTTCTTTTAGTCGCTTCTGTAAAAATGGCAAAAACTTGTGTATCTACCTCGTAGAAATTACTCTCGAACGTAGTAATTCCAAATGGTCTGCATTTTAAGTTCAAAAAAAAAAAAAAAAAA



gi|73869259|gb|DT471997.1|DT471997 WS0122.BR_M05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0122_M05 5', mRNA sequence

GAGCCAAGAATGACTTGCCGG
||.||||.|||||||| | |.
CTTGGTTTTTACTGAAAGTCT

EST sequence (targeted fragment marked with yellow):
GATCATATGGTCAAGAGATATATTCTCCCTTACTCTTAGCCTTCGCAGAGCAGGATGGAGATAGTTGGGCAAGCTCTCATATAGCAACCTTTTCCGCAATGGACCCCTCTTATGCTCTACCTGACAATGTTGCGATATTAACCCTCCAGGAGTTGAATGATGGAAAGGTTCTCCTTCGGTTAGCACACTTATATGAGGTTGGGGAGGACAAGGATCTGTCAGTAATGGCAAGTGTAGAACTGAAAAGGGTGTTCCCAAATAAGAAGATCAGCAAGATAACAGAGACGAGTTTATCAGCCAACCAAGAAAGAGTAGAAATGGAGAAGAAGAGGCTAGTCTGGAAAGTAGAAGGCTCTTCAGGAGAAGAACCTAAAGTGGTGAGGGGAGGACCTATCGATCCAACAACACTAGTTGTTGAACTAGCCCCAATGGAAATTCGTACCTTCCATATCACCTTTGATTAAATTTGACTTTGTGCAAGAAAAATTCTTGCGATCGGATCATGTTCTTTAACCAAATTTCTTGGCTCTGAAAGTCATTTTTGGTTCTTATTGTTGATAT



gi|73884445|gb|DT487183.1|DT487183 WS02533.B21_A01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02533_A01 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
.||||||| |||| ||||| |
TTCGGTTCCTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
CATGCTTTTATTCACCCCCATTGGGGTTCTCATATGGGGGGGAGGACAGCTGGACGAGTCCCCCTCCCTGTTGATTTTGCAGATGATGGCCCAATTTATGTTAATGCTAAACAGTCCCGTGGAATTATCAGAAGGAGACAATCCCGGGCAAAGCTTGAGGCTCAAAACAAACTGGTAAAAAATCGAAAGCCATACCTTCACGAGTCTGGGCACATTCATCCCTTAAATAGGGTTCGAGGATTTGGGGGACGCTTTTTCAGCAAAAAAAAGCTCCAGGAATCTGATCCCCCTCCTAGTCAGGGTAATGTCCCAGATCCCATCCCCTCCCCCGTAAAAAATGATGCATCAGAACTAGAAAGCTATCAGTCTGGAACCGGACAATTTGGTGCCTCAAATACTCCCTGCTCTGACATCCCCAGTGTTTCCTACACCAATGTCACTTTTAGGCACCCAAAACCCCGGTTTTCAGGTATTGCTACTCCCCTTGGGGGAGGCATGGAAATCAACAGTAGGCTTATTTGCAGAGGAACCCAACCCCCCCCTTCCGTTGTTCAGGGAAAATATGGAAGAAGCCCGGGTAATCGGTCAGGCAATTCATCCTTGGCTTGGTTTTTTTTACTAAAAACAAAATGTCCCCGACGGCCCCTGTTATGTATTTGATCTTTCTGGGGTTTGCTTTTTTTTTTTTTTGTTTAAACATCCTCGGGCATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAA



gi|24063353|gb|BU871829.1|BU871829 Q035A07 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence

GAGCCAAGAATGACTTGCCGG
.|||||||||||| ||||| |
TTCGGTTCTTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
GAGCAAAGGAAACCCACACGGGAATAGGGTGTCTAATGGAGCTGTCTCCATTCATTAAACTTCCACCTCGAGTTGTACGGGGCCCTTCAGCATTGCTACACTGGAAAAGCTGGAGGCATTATCCATGTTCAACTTGGGAGGAAACTTTTCCTGTGCTGTGTTTCTCAGGCAATTCATTCTTGGCTTTCGGTCTTCGGTTACTTGTTGCATTCATGGTGGTGAGAGTGTTGCATATGTGGTGATGGACTTCATGTTGTCTTCAGACTTGAACTAATTTCATCTCTCTTCTTTTAGTCGCTTCTGTAAAGATGGCAAAAACTTGTGCATCTACCTAGTAGAAATTACTCTCGAATGTGGTAATTCCAAATGGTCTGCATTTGAACTTTCATGTGACCTCTTCTTTATGTGTGAGCAAAGGGTTCTTCTACCCTAA



gi|52394319|gb|CV235591.1|CV235591 WS0122.B21_M05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0122_M05 3', mRNA sequence

GAGCCAAGAATGACTTGCCGG
||.||||.|||||||| | |.
CTTGGTTTTTACTGAAAGTCT

EST sequence (targeted fragment marked with yellow):
GAAAGAGTAGAAATGGAGAAGAAGAGGCTAGTCTGGAAAGTAGAAGGCTCTTCAGGAGAAGAACCTAAAGTGGTGAGGGGAGGACCTATCGATCCAACAACACTAGTTGTTGAACTAGCCCCAATGGAAATTCGTACCTTCCATATCCCCTTTGATTAAATTTGACTTTGTGCAAGAAAAATTCTTGCGATCGGATCATGTTCTTTAACCAAATTTCTTGGCTCTGAAAGTCATTTTTGGTTCTTATTGTTGATATCAAATGTTTGTAAGCTTTCCAAAATGTAGATCTTGTTCAGGCTCCTCATGTGTAGCTACTCAAATAAAATTTATCTCATTGATATATCAATAAAGTTTAGCTAATC