| mature miRNA: GAGTCACCACCTAGTACTATGGT species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|60702409|gb|DN492219.1|DN492219 V056D06.3pR Populus male catkins cDNA library Populus trichocarpa cDNA clone V056D06 3', mRNA GAGTCACCACCTAGTACTATGGT EST sequence (targeted fragment marked with yellow): TTGAAAAAAAAAAAGTTTAGCATGCATTTTTGGCTTTAATAACCAGTTTATTAAAGTCACGAGAACTGACCAATATTTCAAAAATTCCAAAAAAATTATTTTTTTTAATATCTGGGGTTACGACCTTATACGTAAGACGTATTCCGGATATTAAATTCTTTTGTTAGCGTTAGAACGGTTAGGTTTTACCCGATAAGACAAGGACCTCCTTACCGAGGAGGACTTTTCTTAAACCATAGACGGACCAACAACTAGAAAACACGACAGGACCTTAGATTTTATCAGACAATAAAACAATGCAGCTTACCTTAGGTAGGGCGTATTTGGGGTGCTAATACCTTCCCTTTACGCAACCAGTCTCCGTACCCGATCTCTAAGACCAGTTAAGGTTCCTAGTGACCAAAATACTAGGTGGCGACTCCCATTCCATTTTTCCACTAATAAAAGACAAGAATTCCTTGTCTCCCCACATTTACCACATCAGATAAGATTTAGAGGGTGAATGTTTTCGCCGTGACGCCGCATATGTGCGACAATACTCATGGTTTACAACTTGCCACCGGAGATGTGTATGAGGCCGGAGTTCATGTTTTTATCTACGGTGATACTGGTTCGAGAGTCCAAGCCAAAATATAAATGTTGTCTTTGACC | |||||||||