| mature miRNA: GTGTCAGGACATCCAGCCCA species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73889156|gb|DT491894.1|DT491894 WS02549.C21_B17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_B17 3', mRNA sequence GTGTCAGGACATCCAGCCCA EST sequence (targeted fragment marked with yellow): CCCCCCATCACCAGCTTGCCATTTTGGCTTCCTATTCAGGGGATGAGTTGGTGGCTGTGTATCGCTATTTTAGGAGTCTGGCAGTGGATAATCCCTTTGCAACTGCAAGAGATAACTTGATTGTTGCTTTTGAGAAGAATCGTCTGAGCTACTCTCAGCTGCTTGGGGATGCGAAAGTCTCTGGTGTAAAGGATTCACCTGTGCGCTTGACTGGCAAAGGTAGAGGGAAGAGAGAAGCAAACCCTGCATCTAAGGATATGAAACTGGAAGCAGGTGCTGTCAAGGAAAAGACATCTAGTATTCATGAGATTCACAAGTCCTTCTGTGTTCGGTTTGTCCGACTGAATGGCATTCTTTTTACACGCACTAGCTTGGAGACATTTTCGGAAGTTCTGGCACTGGTTAGCATTGGATTCTCAGAGCTTGTTTCTTCTGGACCAGAAGAGGAGCTTAATTTTGGTGCAGATGCTTCTGAAAATGGACTTTTCATTGTTCGCCTCATCTCCATTCTTATATTTACTGTTCACCATGTGAAGAAGGAGGCTGAAGGTCAGACATATGCAGAAATCGTGCAGCGTGCTGTTCTGCTTCAGAATGCCTTTACTGCTGTTTTTGAGTTCATGGGACACATATTAGATAGGTGTGCACAGCTTCATGATCCCTCCTCAAGTTACCTATTACCTGGCATTATGGTTTTTGTAGAATGGTTGGCTTGTTGTCCTGACATAGCATCAGGCAGTGACATAGATGAGAAACAGTCAGCTGTAAGATTGAACTTTTGGAATCACTGCATATCATTTTTGAACAAGATTGTTTCATGTTGCTCAATGTCTCTTGATGACAATGAAGACGAGACATGCTTCTTTAACATGAGCCGTTATGAAAAAAAAAAAAAAAAAA | |||||||||