| mature miRNA: TGAAGCTGCCAACATGATCTG species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|24068916|gb|BU877392.1|BU877392 V033E03 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence TGAAGCTGCCAACATGATCTG EST sequence (targeted fragment marked with yellow): CGGCCGGGGGAAAGAGAGGACCGAAAGATTAGAATTCGAGATCCGAGAAAAATAAAAGCAGAGTGAGTGAGTGTGTGGCTGTGCCAGTCCCTCTGTTCAGAAAAAAGCTCCTCCGCCTCAGGTCCTGGTGGCAACTTCACAACTGCCGTCGTGTCACTCCTCCACGTATACAAAAGAAAATAAAGACAGCTTTTGCTCTATCCAAGACATTGGCAGACTTCCCTTAGATTCCTCGTCCCGATCTCCAACTCCTCAGAATTTCGTCATTTCCTATGACTTTGTCTAACTGTCTGTAATCACATGCATGAATTTGCCTGTCTCACTTTCTTTTAATTCCAAACCGAAATCGCTAATCAGATCTCGGGTGTGATCAAGATGTCATTTAAGGGAAAGTTAAAGGAGATTAGAGATGACATTTCTACCACATTTTCGATGGGAAAGTTACAGAGGAACAGAACAAATCGAAGAGGGAGAGCTTATATTGCGCCTGAATTAGGAGGTGGGTCTGAGTTGTTTAGGGAGTTGATTGAAGAACAGAGTCCGTGGGCTAATTTGCCGCCTGAATTGCTACATGATGTGA | |||||||||