miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGACAGAAGAGAGGGAGCAC
species: Populus trichocarpa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|18017515|gb|BI136587.1|BI136587 F070P38Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||.||||||||.||||
ACTGTTTTCTCTCCTTCGTA

EST sequence (targeted fragment marked with yellow):
CTCGTTCGCACGCATCACTGGTATTTCTATGATGCTTCCTCTCTTTTGTCAACAACAAAACCGACACTAAAAGAAACCCAAACTTCCTTTCCAGACTTGTTTTTTATTTCTTACAAAACTCAAAAAAGAAAAAAGAAGAAGAAAGAAATACCCACTGTTTGATCTTTTGATTATGCTTTCAAAGAAACAAACTTTCTTCATTCAGCACCATTTATAGATCAAAACAAGCAAAGCCCACAAAAAAATCCCATCTCTTACCCATTTTACTAGAAAATGGCGCTAAAGAGATCGTCTTTGAATCTCTTTATAGGGTTAAAGGTGATTTCTTTGATAGCACCAAGATCTATAGCTAGATTTGTTGTTGAAAAAAACAGTTTGAGGGTTACATCACCAGATAAAATAAAGGGTACTTATGATAGTGCAATTGGGAATTTTGGGATACCCCAATATGGAGGTAGTATGGCAGGTGCTGTTGTGTATCCAAA



gi|18018703|gb|BI137755.1|BI137755 F093P04Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||.||||||||.||||
ACTGTTTTCTCTCCTTCGTA

EST sequence (targeted fragment marked with yellow):
CTATGATGCTTCCTCTCTTTTGTCAACAACAAAACCGACACTAAAAGAAACCCAAACTTCCTTTCCAGACTTGTGTTTTATGTCTTACAAAACTCAAAAAAGAAAAAAGAAGAATAAAGAAATACCCACTGTGGGATCTTTGGATTATGCTTTCAAAGAAACAAACTTTCTTCAGTTCAGCACCATTTATAGATCAAAACAAGCAAAGCC



gi|73890258|gb|DT492996.1|DT492996 WS02553.C21_B13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_B13 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
.|||||||||||..|.|||
TTTGTCTTCTCTCTTTTGTG

EST sequence (targeted fragment marked with yellow):
GTGATAAAACTGGAGGAAAGAACAAGGCCATTGAATACGACAATTTCATCAAGTATGTTTTTCTTCGTCTCTTTTTGTTGGTTTTGTTTGAGAACATTTAGTTTTCTGACTTCTGCTGAGCATCTCTAATATGGTGTTTTCTCTCTTCTGTTTTTGTGGAATGCAGATGCTGTCTGACTGTCAAGGGACTGACTGAGAAGTTCAAAGAGAGGGATACTACATACTCTGGTTCAGCAAGTTTTACTTACGAGAATTTCATGCTAGCTGTTCTTCCATTCCTCATTGCATAGACGGGGATTGAAAGCTAAATCGGCACGAGCCAGTGATGTACTTTCTGGGTCGTACACATATCTTTTTTTCTTCACCTAGCATCATCTTGTGTATCTGGTTTTAGTTGTAAAAACTAAAAACTGTTTTAAGGGTTTTGTGGATACAAGTTTGCAGATCAATCCCTCTATCTCTACCTTAAATCTTTGAACTCTGATGTATGGTTATTGTCATTTCATTCCTATGGTTTCAAGCTTGCAAAAAAAAAAAAAAAAAA



gi|73876551|gb|DT479289.1|DT479289 WS02525.BR_F21 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02525_F21 5', mRNA sequence

TGACAGAAGAGAGGGAGCAC
||| ||||||||.|.||| |
ACTTTCTTCTCTTCTTCGGG

EST sequence (targeted fragment marked with yellow):
GGTCTGCATCAAGGGAAAAAACAGAGAGGTTTTGTAGAGCAAAGAAAGATGACGGCGGGGAACATGAATCGAGCAAGTCTTTTTCCCACAAAAGATTCAAAATCTCATCTTCAACGCTAAATGGGTATGGGCTTCTTCTCTTCTTTCAGTAGCAGCCGTAGGAAGGGCTATTTTGGTAACCTTGATGATGCTTTAGCTTCATTTAATCGCATGCTTGATAGGAATCCTCAGCCTCCTATTATCGAGTTTAATCGGTTATTATCTTCAGTTGTGAGGATGAAAAAATATGAGACAGTTGTTTCTTTGTTCAAAGAAATGGAATTTAGAGGAATCAAATACAATGTCTGTACTCTTAGCATTTTGATTAATTGCTTCTGCTTCTTACATCATGTGGATTATGGGTTCTCTGTTTTTGGAAAGACCCTTAAACGTGGTTTTAAGCCTGATGTTGTAATATTTACTACCTTGATAGATGGGGTCTGTAGGATTGGGAAAACCGAGGTGGCTGCTGGGTTGCTTAAGGAAATGGGACTTGTAGGTTGTGTTCCAGATGTTGTTACTTGCAATTCGCTAATGCGTGGATATTGTTCGCTAGGGAAAATCGATAAGGTTAGAAAAATATTTCATTTGATGGCGAGTAAAGGTCTTAAACCTGATGTTTATAGTTACAGTATCTTCATCAATGGGTACTGCAAGGTTGAAAAAATAGATGAGGCTATGGAACTTTTTGATGAAATGTCTCATAGAGGTGTGGTGCCTAATGCGGTTACTTATAATACTCTGATAAAGGCCTTGTGTCAAGCTTTGAGACCTCGGGATGCACAAGTGCTTTTCAGGA



gi|73873258|gb|DT475996.1|DT475996 WS0128.BR_O10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0128_O10 5', mRNA sequence

TGACAGAAGAGAGGGAGCAC
||| |||||||||.||| |
ACTCTCTTCTCTCTCTCATT

EST sequence (targeted fragment marked with yellow):
GGAAACAGAAAAAAAAAAAACAGAGGATCCCATCTCAGAATATTTCGTTGAGAGAAAAACTGATTGATATTTCAGATTCTACTTCTTACTCTCTCTCTTCTCTCAATTGCCTTAATCCTCTTTTTCCAAGAGGATTTCCATCTCAGTAGATTGATTCTGGTAGTCTATGGCAACTCCTAAGCATGTTAAGTTTTGCACTCACCAGAAGGTGGGAATCCTGTTGATATTCTCTGTTGGCTTTGGCTTTTTCTTGCAGAGTTCATCTTCAAGTGAGGAGACAAGGTGTGAGTCGAGTTCCAATTCCAACAACTCATATTGTGGTTTCAGGAAGTATATTATGGAATCTTATTTTGAAAAATATGATAGCTTGCTTGAACCAAATTTCCAAAACTTCATAGTAGATGAACTTCTTTTTAATACCTGCAAGCTGCTGCC



gi|73896243|gb|DT498981.1|DT498981 WS0116.BR_O11 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_O11 5', mRNA sequence

TGACAGAAGAGAGGGAGCAC
||| ||||||||.|||| |
ACTCTCTTCTCTTCCTCCCG

EST sequence (targeted fragment marked with yellow):
GGCCGCTATCAGATCTCTCTAGCTCTACTGGATCTAAAAAAGAAACACAATGTCGACTCGCTTCATTTTCCTCCTCTCTCTCACCGCCCTCCTTCTCTTCTCTCATCTCTCTCCCTCTCTCTCTAAACTCCAAAACGCTGCCGCCGAAGATGACGATGAGGATCTTAGTTTCCTCGAAGAAGAAACCGACGCCGTTCCTCACGGCCAGGCCACGGCCACAACCACGACCACGACCACTACCCCGATCCGGACCAATTCGACGAAGAATTCGACAACGAAGATGACCTCGACAACTACTCTGATCTCGATGATTCCGAATTGGATTCTTACAAGGAGCCTGAGATTGACGACAAGGACGTCGTCGTTTTGAAGGAAGGGAATTTCAGTGATTTTGTGACTAAGAATAAGTTTGTGATGGTGGAATTCTACGCGCCATGGTGTGGTCACTGCCAGTCGTTGGCTCCCGAGTATGCGGCGGCTGCTACGGAGTTGAAAGCGGAAGAAGTGATGTTGGCTAAAGTGGATGCAACGGAAGAGAATGAGTTGGCTCAGGAATATGATATTCAAGGCTTTCCTACTGTTTATTTCTTTGTTGATGGAGTACACAGGCCTTATCCTGGCCCAAGAAACAAAGATGGAATTGTGACATGGATCAAG



gi|60712299|gb|DN502109.1|DN502109 V051G05.5pR Populus male catkins cDNA library Populus trichocarpa cDNA clone V051G05 5', mRNA

TGACAGAAGAGAGGGAGCAC
| |||||||||||| ||||
AGTGTCTTCTCTCCGTCGTT

EST sequence (targeted fragment marked with yellow):
GAACCATTTGCATTACTAAATCATCCATAAAAGAAGTAAGAAAGAAAGGGAATGGATAGCAGAGGTAATGACATCACTTACAACGCCGGCGAACTAGCCGGTCAAGCTCAGGCGAAGAAGGATGATGTTATGGACCAGTGCCAGGAAGGGCTTAACCAATCCACCCAAGACAGTTCCTATACTGCCCAAGCTTCCAGCTTCCTTCATCAGACCGGGGAGCAAGTGAAGAACATGGCTCAGGGAGCAGCTGAAGCAGTGAAGAACACTCTGGGGATGAACACAGAGAACACTCCCACCACCAATACCAGCAGCCTCAACCACCCAATCAACCCAAGCAATCCAATTAACCCATCTACTAGGATTTGAGGTGTTTCTACGTTGATCACCATGATTTGCTATGATTTAGCAGTATTTTATTTGGTCTCCTAAGTTATTGTTATGACATTTTTGCTGCCTCTCTTCTGTGAGAAGGCGATTTTACGTTTGTTCTTGTTGATTTATTTAAGATGTAATCGTCTTTGGGTCAAAAAGAAAAAAGGGGGTGATGAGATGATGCCTCTTCATTCCAATTGTAATAAATTTTGATTCATGGAAATTATCTTTCCTTGATTCGTGTTCATC



gi|52497079|gb|CV244104.1|CV244104 WS0253.B21_L24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0253_L24 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
||| ||||||||||.||| |
ACTCTCTTCTCTCCTTCGGG

EST sequence (targeted fragment marked with yellow):
TTGCAGAAAATGGAGGGTCTTGTGTGCTCAAACGCTGTCGTTTTGGAGGGCTTCCTCTCTTCTCTCATTGAAGCCGTGGTACTTGAAACAGCCATTGCTGCTTGGAAGGCACTTGCTTTGTCACTTTTCATGATAGGTTCTTTGCCTAACAGATCCAGTGACATCCCAGAAGAGTCAGGCACAAGTCGAGGGTTTCCATTTACTGGGCTTCACGTAAGGAAGAAACCTGATCCTGATAATCAAGATGCCAGTGATACCGAGGATGATGAAGACGATGAGGATGGCCAAGATGATCAGGACGAGGATGATGAAGGCGATGATGAGGATGTGCCTGACAAAGGAGAGGATGGTGAGGATCCGGAGGATCCGGAGGATCTGGAGGATGAGCCTGAAGCCAATGGTGATGGTGGCAGTGATGATGATGATGATGAAGAAGACGATGATGATGAGGAAGATGAAGAAGACGATGATGACGAGGAGGATGAAGACGAGGATGAAGAGGAGGATGAGGAAGATATTCCCCAGCCACCATCTAAGAAGAGGAAATGAGGCCAAAATCATTTTCCTCTTTTTTTCTTATTTTGTTTTATTTCTCTTGTTAGATTAGGAGTTTGGGTTAACAGGGAGCGTAAGCTGGGAGGATTGAGTGTCTTATCTGCATCCTGGTCGAAAAGATTGTGGCAAGTGTGCGGGCACATATTGGTATTTCTAATGTTTAAGAATTCAGTTGTTTTTACTGTTGCATATTTCCCTGTTATACTGTGATTCACCCGCGTTCAAGAGTAGAATCTTGGGATCCTGCAGGCTGCAAATGCTTCAGAATCGCCCTCAGCTACAATTGTAGCCGGATTCAAGAAAAAAAAAAAAAAAAAA



gi|73881185|gb|DT483923.1|DT483923 WS02523.B21_P03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_P03 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||||||||||.||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
AATAACAAAAGATTATATAGCAAAGCCTGCAGAAATAGGTGGTAATGATGGGCAGTTTCACTTGCCTGGCTTTGATCTGACAAATGGCATTGATATTCAGCACCATCATAAGTCTAATAGCTCCTTACCATCTAAAGGTTTGGAAGAATACATCATTCCTTCCAAAGCGGAAGCAGCACCAGAATCTCATCGTGCTCTCTCTCTTCTGTCAAACAATTCATGGGGTTCACGTGAGCCGCAATCTATTTCATTTGAACAACCCGGGCATACAAATCACACCACTCAGTCTGTGCTGCAAGTTATACCCCAAAACTCACCACTTGCTTCATCAGAGTATTGGAGGACTGAGCAACCGTCAACTGACTCTCAAGTGCATACCTTGACGTCTCACTGATGGTAGCAGTTACTTTCAAGAGTTTCAGCTGTTAAGAACATCAAAAGGGAATGACTTCAATTCCATCCAGATGAACTTACTGCTGAAGCGATTTATCATTTTCATCTTAACAAATTAAGTGAAGGCACTGGACCATCCTGTAGCATACTGTTAGGATTCAGATCATGGTGATTCGAAGTTCTCCTAAAACACCATTTGGACTGGTTAATGATGGATCACTGATTTGAAAGTTATCTGTATCTGTTATTAAATTTCTAGGAACCTAGAACTTAATATTGCAACTTTTGAAGCATCTTTTGAAAACCTAGGGATCTGAGCTATCAATTTTCTTGTTCCTTCCATTCGATGCCCATGGTAAAGCTCGTCTTCGCTTCTCTTGTGCTGTAATATACTGAAAATAGTAGTACTTAAATGCAGGTATGAATGATCTTTCAAACGGAAAAAAAAAAAAAAAAAA



gi|73883136|gb|DT485874.1|DT485874 WS02529.B21_G14 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02529_G14 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||||||||||.||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
CTGCATTAACTTCTAACATTGAGGTAGCACCAGATCTTCGGCGTGCTCTCTCTCTTCTGTCAACCACTTCTTGGGGCTCGAATGAGCATGGATCCACCTCTCTGGATCAACTGATGCTTGCAAACCAAACAAGCATGACACAGCCAATGATAAATGCTGAACTCCAAAATTGTCCAGTTGCTTCATCAGAAAATGCACGGATGGAACAAGCATCCCTTGAGTCTCGGGTGCATTCTTTGGATTTACATGACAATGGAAACGTCCAGTTGCAAGAGTTTCAGCTGCTCAAAGCACCCTATGCTACCGGCTGCTTTTATTCCAATCAATTCAGCTAATTATTGGAAATGATTCAGCTCTTCCTTTTTGAAATAACTGCTCGTTAAGGTTTGCTTTCATCTGGCAATTTTTCAAAATCGAACATTTGGATGGTTTCAAAAGCATCAACTTTCAACCATTTGAAGTCTGCCAGAATTGCCAGAATTGCAGTTCAAACTAATGTTTGCCAGAGTGCAGTTTAAAAGGAAGTCCAGAATAAAGTTGCTGCTGCACCGTATTTTCTTGACTAAAAACACCATCTCATAACACCATTTGGACTGCAATGTGGCTAAAACCTTGCTATTACCTCTCTCTATCTGGACAGTATCATTGGCATGACATTTGTAACTTTGTCAGACTGCAAAATGAATGGTTTGGGGGATTTTTTGTCTTTGCTTGATGATGACAACATTAATTCCCTGTTAGATTTCCATTTCTCCTCAACTAAACTTAGTTATGTTTTAACAAGGCTGCTTTGCTGGTAATAAAATCAGTCTTTAACGGGCAAAAAAAAAAAAAAAAAA



gi|18016759|gb|BI135831.1|BI135831 F059P07Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||.||||||||.||||
ACTGTTTTCTCTCCTTCGTA

EST sequence (targeted fragment marked with yellow):
CTCGTTCGCACGCATCACTGGTGTTTCTATGATGCTTCCTCTCTTTTGTCAACAACAAAACCGACACTAAAAGAAACCCAAACTTCCTTTCCAGACTTGTGTTTTATTTCTTACAAAACTCAAAAAAGAAAAAAGAAGAAGAAAGAAATACCCACTGTTTGATCTTTTGATTATGCTGGCGAAGAAACAAACTTTCTTCATTCAGCACCATGTATAGATCAAAACAAGCAAAGCCCACAAAAAAATCCCATCTCTTACCCATTGTACTAGGAAAATGGCGCTAAAGAGATCGTCTTTGAATCTCTTGTTAGGGTTAGTGGTGATTTCTTTGATAGCACCAAGATCTATAGCTAGATTTGTTGTAGAAAAAAACAGTTTGAGGGTTACATCACCAGATAAAAATAAAGGGTACTTATGATAGTGCAATTGGGAATTTTGGGATACCCCAATATGGAGGTAGTATGGCAGGTGCTGTTGTGTATCCAAAAGATAATAAAAAGGG



gi|73885447|gb|DT488185.1|DT488185 WS02535.B21_L20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02535_L20 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
||||||||.||| .||.|||
ACTGTCTTTTCTATCTTGTG

EST sequence (targeted fragment marked with yellow):
GGCAACAGCTCCTGTGCGTCCAGTGATCCTGAGGTATCCTTACCAACGATTCAGTCCTGCCTGGGATTCAATATCTGGGGCGCTCCATGTGTTCTATCTTTTCTGTCAATTCATAAATCATATGGAAGCAGTATGGCTTCCTGTTTACTACCCATCACAGGAAGAAAAGGACGATCCAAAGCTATATGCTAGTAATGTCCGACGGTTGATGGCCCGTGAGGGTAATTTAAAAATGTCAGATATTGGACTTGCCGAGAAGCGAATATATCATACTGCTCTGAATGGTAATATTAGCCTGCCTAGTGTTTTGCATCAGAAAGACGATTGATAATTTCATGGCCTCGCTTCCAACTGATAAATCTATTCTGAGTTGAGCTTTTCACTTTATGTTGGGTATTTGCTCATAAATAACAGTCAAAACACGGTGGCAACACTCCACCATTTAGTATAAGAAAAAGATGCTGGTATTGATTTGTAAACTCTTGCGCGGGAATTGTGGCAATTGAGCACGGTTTTAAATGTGTTGGTGGGGTGAATGTTTGCCAAAGAACCTAGTTTAAGAAATTTCTGGGATTCTGTATCGTGTTATGTATGCATTTCTCATTGAGTTTACTGAATGCCTTGAAACCCTTTTCGAAAAAAAAAAAAAAAAAA



gi|73886763|gb|DT489501.1|DT489501 WS02542.B21_G11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02542_G11 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||||||||||.|||||
ACTGTCTTCTCTCTCTCGTT

EST sequence (targeted fragment marked with yellow):
AAAAGAAATGATGTAAGGGAAAAGCAAATTAGGATGGTGATGGGGAGGGAAGTAATGAAGAAGGATAGTGCTGATGACTCTTCAGATGATGAAGGGTATGAGCAAAACCAGATGGGGTTTATGGAAGATGAATTTTTCGAGAGTAACAAGAAAAAGAAAGTGGTAGTTACTGCTGCTGCTGCTGCTGGTGGAGGAAGGAGGGTGTCAAGTGGTGGTGGAGGAGGGATGAGGTGTTGTCAAGTAGAGAAGTGTACAGCTAATCTGACTGATGCAAAGCAATATCATAGGAGGCATAAGGTTTGTGGACATCATGCTAAGGCTCAGGTTGTGCTTGTAGCTGGAATTAGGCAGAGGTTTTGCCAGCAATGTAGCAGATTCCATGAACTATCAGAATTTGATGAAACCAAAAGAAGCTGTCGCAGGCGGTTGGCCGGACACAATGAGAGGCGAAGGAAGAATGTTATTGAATCTCACGTGGAAGGCTCAAGCCGCAAAGTGAATGGAACTCATGGCACCCAGTTGAAGGATATGGTATGTGGACAGGCTGATGAAAGGGGAAGAATTAAGATAACAATCCAAGAAAATGCCACTTACAAACATTTCCAGATAAGCTAAACCGATTGCTCTCTCTCTTCTGTCATCCTAGGGATGTAGTGATGCTGATACTCTTTCCCTTCTTCTTCTTCTTCTTCTTATTATTATTATTATTATTATTATTATTATGTACTTCTCCGGCTAAACAAATGCTAATGTCACATTGTGTGACAACCATGCATGGTGTCAGGTTTGCTAGCTGTGGCACTAGGCATATGCTACCAGTGTGGCTTAGCTACTTAACTTAACCCAACTTATTCTAATAGTTTCAGGGTATTGTTGCAGGCACTGACTTGACTTGTATTGAGTGTTTTGCTTCAATCAATATATTATCAGTTATCACAAAAAAAAAAAAAAAAAA



gi|24067344|gb|BU875820.1|BU875820 V011H02 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence

TGACAGAAGAGAGGGAGCAC
|| |||||||||||. |||
ACCGTCTTCTCTCCTCCGTC

EST sequence (targeted fragment marked with yellow):
CTCCTTCCCTTCTCCTCCTCCTTTTTTGGTCCCTTTCTCTCCCATTCTCCGAACGCTTCAACCCCCCTTCCCAAGATTTCTTCCTTTTCCTTTTCCTCCTTGCTGTGGTTAAAGAAAAAAGAAGATGATTTTGGTGATGAATTGTAGTCAGTGAAGGCTAGGCTTTAAAAGTCTAGTAATTGGCTGCTGCGCTGCCTCCTCTCTTCTGCCAGTAAATGGGCTGTTTTAGTTCCAAAGTACCAAGACAGTTCCCTGGACATGAGGACCCTGTTGCCCTTGCCTCTCAAACAGCTTTTAGTGTGAGTGAAGTTGAAGCGCTTTTTGAATTATACAAGAGCATTAGCAGTTCTGTGGTTGACGATGGGTTAATAAGCAAGGAAGAGTTTCAGTTGGCCCTTTTCAAGAACAGAAAGAAAGAGAATCTCTTTGCAGATAGGATTTTTGACATGTTTGATGTTAAGCACAACGGAGTCATTGATTTCAGTGATTTTGTTAGATCACTCAATGTCTTCCATCCCAATGCCTCACAAGA



gi|73887626|gb|DT490364.1|DT490364 WS02544.B21_M03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02544_M03 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||||||||||.|||||
ACTGTCTTCTCTCTCTCGTA

EST sequence (targeted fragment marked with yellow):
GTGAATATGGAAACAAGCAGAGCTGAAGGAAAGAGGAGCTTGAAGGAAATAGAAGATGAAGAGGAAGAAGAGGATGATGAAGATATTGCTGGAGGGCTAGGGTTTGTAGATGATGACAAGATCAAGAAGAAAGGAAAGAAAGGATCTAGTGGTGGTGGGTCGTCGTCAATGCTGCAGGTTTCTTGTCAAGCAGATAATTGCACCTCTGATCTGACTGATGCCAAGCGATACCATAGACGCCATAAGGTTTGTGAGTTCCATGCCAAAGCTCCCTTTGCTCCCGTCAATGGACTGCAGCAACGCTTTTGCCAGCAATGTAGCAGGTTCCATGATTTATCAGAGTTTGATGACAGCAAAAGGAGCTGCCGGAGGCGTTTAGCAGGGCACAATGAACGGCGTAGGAAAAGCTCGGCTGAATATCAAGGAGAAGGATCGAACTGACAAGAGTTGTGATCTCTCAGGAGTGCTGGAGGAAGGCTCACTACATAAGAGGGAGACAATTACGTATTATTTCCCCCATAAAGTGCCTCTTCCAAGCATATTTAGATTGGTTAAAATATCTAAATATGTGATCATTGCCATGCTCTCTCTCTTCTGTCAATCCTTAGCTTTCATATTAATTATAATCTATGATCTGTACTTAATTAATACCATTCAATAAATGGATGCCATATATATTATTGGGCAAAAAAAAAAAAAAAAAA



gi|73887215|gb|DT489953.1|DT489953 WS02543.B21_K06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_K06 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||||||||||.||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GAGGCAAACCCTACTACAGCGTCGGTGGTGGTGGTGGTGCTCACGACGGACCCTCCTCTTCCACGTCAGTGAATGTGCCGAGGTGTCAGGTGGAGGGGTGCCATGTGGCGTTGTTGAATGCTAAAGATTATCACAGGAGGCATAAAGTTTGTGAGATGCACTCCAAGGCTCCTAAAGTAATTGTTCTAGGTTTGGAGCAGCGGTTCTGTCAGCAGTGTAGCAGGTTTCATGTAGTGTCAGAGTTTGATGATGCAAAGAGGAGTTGTAGGAGGAGATTGGCAGGGCACAATGAAAGAAGAAGAAAGAGCTCTCAGGATCCTGTTTCAAGGAATTCCTCTCAAGAAAAATTGATGGCTGGGAGATTTCCATACATAGCGTCGCCGACAGGATGTGCTCTCTCTCTTCTGTCATCCAAAGCTGATTCCTGGGTTTCTCCTTCTGATCTCTCCTCAAGATCAAGTGCCGCACTACGTGAATTGATTGCAGAACACCGCACAGCCATCCTATCTAGACAGCTTGTTCTTGAAAAACACTTGCACCACCATGCCATGGAAGACCTTGGTGAGTCCCAACCTAGCTCCAATTTTCTTATAACCCATCAGCAACAAGTGCTGTCCGAGCCACACAATTGGGGCCGGTTAAACGACACCAGCACGCATGTGACTTTGGACCTCATGCAGGCTCCAAGTTCAGCATTCGGATTCTTGTCTCCCAGAGGGAAAAATAAAGAAGAAGAAGAAGAGTGTTTTGAGTTATGGAGCACCATGGAAGGAGCCCATGTAGTTTAAAATTAATCTACAACACCTACTTTATTCTTTTGCATTTGGTGTTAATTGTTTGGTCAGTGAGGCTTTTGGATCGTTCAACTTGCTGTATAATTCTTTCTTGTTTGATTTGAAAAAAAAAAAAAAAAAA



gi|73890315|gb|DT493053.1|DT493053 WS02553.C21_D23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_D23 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||||||||||.||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
AGCAGCGTTTCTGTCAGCAGTGTAGCAGGTTTCATGTAGTTTCAGAATTTGATGACGCAAAGAGGAGTTGCAGGAGGAGATTGGCAGGGCACAATGAAAGAAGAAGAAAGGGCTCTCTAGATTCTGTTTCAAGGAATGCTTCTCATGTTGAAAATCTATGAACATGAAACTATCTGAATATCCAATTTCCTCCTCATCAGACAAGTTGATAGCTGGGAGATTTCCATACATAGCGTCACCGACAGGATGTGCTCTCTCTCTTCTGTCATCCAAGGCTGATTCTTGGGTTTCTCCATCTGATCTCTCCTCAAGATCAAGTGCTGCGCTACGCGAATTGATCGCAGAACACCGCGCAGCCATCCCAGCTAGGCAGCTTATCCTTGAAAACACTCGCACAACCATGCAATGGGTGAGTCCCAACCGAGCTCCAATTTTTTCATAACCCATCAGCAACAAATGTTGTCCGAGCCGCACAATTGGGGCCGGTTCAACGGCACCACCATGCATGTGACTTTGGACCTCATGCAGGCTCCAAGCTCAGCATTCGGCTTCTTGTCCGCAAGAGGGAAGAATAAAGAAGAGGGAGGAGAGTGTTCCCAGTTATGGAGTACATTGGAAGGAGCCCATGCAGTTTAAGATCTGCAACACTTCCATTCTCTTGCATTTAGGCGGGTGGATCATTGAGTTGATCTACTTGTATAATTCTTTGTACCGCAAGTTTCATTCTTCAATTCAAATATCAGAGTGATTGTAATAATCAATGCATTTGGAACAAATTGCCAGCTGAATCTCTGTATTTCTTTCTAGCCTGAGATAAAGTCTTGCACCCAAAAAAAAAAAAAAAAAA



gi|18016954|gb|BI136026.1|BI136026 F062P07Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||.||||||||.||||
ACTGTTTTCTCTCCTTCGTA

EST sequence (targeted fragment marked with yellow):
TGGTATTTCTATGATGCTTCCTCTCTTTTGTCAACAACAAAACCGACACTAAAAGAAACCCAAACTTCCTTTCCAGACTTGTTTTTTATTTCTTACAAAACTCAAAAAAGAAAAAAGAAGAAGAAAGAAATACCCACTGTTTGATCTTTTGATTATGCTGGCAAAGAAACAAACTTTCTTCATTCAGCACCATTTATAGATCAAAACAAGCAAAGCCCACAAAAAAATCCCATCTCTTACCCATTTTACTAGAAAATGGCGCTAAAGAGATCGTCTTTGAATCTCTTATTAGGGTTTATGGTGATTTCTTTGATAGCACCAAGATCTATAGCTAGATTTGTTGTTGAAAAAAACAGTTTGAGGGTTACATCACCAGATAAAATACAGGGTACTTATGATAGTGCAATTGGGAATTTTGGGATACCCCAATATGGAGGTAGTATGGCAGGTG



gi|73886999|gb|DT489737.1|DT489737 WS02543.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_A18 3', mRNA sequence

TGACAGAAGAGAGGGAGCAC
|||||||||||||.||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
ATGGGTTACAAAAGACTGTGGAAATTCTTCACCGGCAATTGATGACCGCAATTTTTGTACCACAACAACTTTTCATGAGTTAGCTGGGGCGTCGCACTCTAGCTGTGCTCTCTCTCTTCTGTCAGCTGAATCACAGGACTTGAGCCATTCTGCAGGAAATATAACGGCTAGGCCCTTGGTCAGTCAAGTGAGTCATGCTTGTCAGAGCTTGGGTAATGTTAACAAATCTTTAGGGGTAGGCTCCTTGGAAAAGTACTTCCCAAATGGGCTCTATCCGTCTGGAATGAATTTCATTGAAGTCAACGATATGGGGCCATTTGTGGTTCCTGGTTCCGGTCACGCAGCGGACTTCCAAGTTGAAACAGATGGATTTCTACAACAGTCAGATATTTTGAATGCGAAGTATTGCGTTTCTCCTGAAAATGGATCAACTGTGGATTTGCTTCAACTCTCATCACATCTTCAGAGGGTGGAGCAACAGAGGAACTCCATGCAAGTGAAGCATGAAAATGAGGAGTTCTGCAGTTTCGGCTCTACTTATGGGGTGTGAGAGGAACAAGGTTCAAAGGAGAGAATTGATGGCAAGCTGCTTGCCTGCATCAGATATAACTACTAACTTTATCGGTGCAGTAGACAATAGGCCCTTAAGAGACTTCAGCTTGCGTTTGCCGTGCATTCCTTTACTTGAAAGGTAAATAACACGAACAATATGTGGAATTTTTTTAATATTATTGTTGTTATTATTATTGTAAGGTGATGCAAGTTTGATTTTGCTAGAGATGACTTATTTCAACTTTCATTTGGAAATACTGTGCTGGACAAGAATTCAATTACTAAATTATGTACGACTGAGTATATCATTGCACAAAAAAAAAAAAAAAAAA