| mature miRNA: TGTGATCCAACTGTTGGATCA species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52388195|gb|CV232546.1|CV232546 WS0197.B21_P02 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0197_P02 3', mRNA sequence TGTGATCCAACTGTTGGATCA EST sequence (targeted fragment marked with yellow): GGGATTCCAACTGATGGATACTGGCAACAAGGGCAGATTTACCATTGATGAGCTAAGAGTTGGATTACAAAAACTTGGCCAGCAGGTCCCTGAGACTGATCTTCAAATTTTAATGGAAGTGGGTGATGCAGATCGAGATGGCTATCTTGACTATGGAGAATTTGTGGCTATTACTGTTCACCTGAGAAAGATGGGGAATGACGAACACCTTCGCAAAGCCTTTGAATTCTTTGATCAAAACCAAAGTGGGCACATAGAAATCGATGAGCTAAGAGATGCCTTGGCTGATGAAGTTGATGGAAGTAATGAAGACGTTATTAATGCAATAATTCATGATGTGGACACAGATAAGGATGGAAAAATAAGTTACGAGGAGTTTGCCGCAATGATGAAGGCCGGCACAGATTGGCGGAAAGCATCAAGGCAGTATTCACGAGAGCGGTTCAACAATCTGAGCCTGAAACTAATGAAGGATGGATCATTAAAATTGACCAGTGAGGGTAGATGACTCAACAAGAATTAAACTGTATAATCTGTGTTATTTCCCCATATCTTATTTTATTATTTAAAAATCTTTATATTTAACTAGGACTTGTGCCCTAGTTGTGGTTTTTTGGTGTTGCAATGTTTTATTTGTTTGTTGTGGGAGTGATGAGAAAAAAAGCGGTGGTGAGAGATCGAAGGAGCTGTGTTGTAAATAGTGTTAAACTGTTAATACCATTATCAAATTCATCATCTAGCAGTTGTTGGGTGTAAATTTAACCAAGAAAAAAAAAAAAAAAAAA | |||||||||