| mature miRNA: TCGCTTGGTGCAGGTCGGGA species: Populus trichocarpa x Populus deltoides database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73901078|gb|DT503816.1|DT503816 WS0137.BR_O18 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides cDNA clone WS0137_O18 5' TCGCTTGGTGCAGGTCGGGA EST sequence (targeted fragment marked with yellow): GATTTTACAAGGAGCTCTTTCTTTTTTCTTTCTTTTTTTTTCTTTTTTTATTTTATCTTTTCTCTCTCACTCTCTCTACACGAAGTGCGCTCATAGTGCTGTACGGTCACCCTTCTTTTTGTCGTTTTTACTCTCCGGTGACCGAAAAGTTGATTTCCGATAACTGCTATCAGGTATCATCATGGTGAGGAAGAGAAGAACCGAAATTCCTCAAAGTGGGGGTGAGAGTTCTGAGTCGCAGGAAACTGATACTGGTCGGGGTGCCCAGCCCCCAGCAGAGAGGAGTGGTCCACCTCAACAGGGAGGAGGTGGAGGAGGATACCAAGGTGGAAGGGGTTGGGGTCCCCAGTCTCAGCAAGGAGGTCGTGGAGGTGGGTATGGTGGACGAGGCCGGGGAGGGATGCAACAACAGCAATATGGTGGAGCCCCTGAGTACCAGGGCCGGGGAAGAGGGCAACCTCAGCAAGGAGGTCGAGGATATGGTGGTGGTCGTCCTGGAGGTGGCCGCGGAGGGCCATCTTCAGGTGGATTTAGACCACCAGCACCCGAGCTGCACCAAGCTACCCCAGCTCCTTATCCAGCTGTGGTGACCACTCAGCCCACGCCATCTGAGGCAAGTTCTTCGATGCGACCACCAGAGCCATCGCTAGCAACTGTATCGCAGCAGCTGCAGCAACTATCTGTTGAGCAAGAAGGTTCTTCTAGCCAGGCGATTCAGCCGCTGCCAGCCTCAAGTAAATCAGTGAGGTTCCCTCTTCGACCAGGAAAAGGTAGCACTGGCATTAGGTGTATTGTAAAGGCCAATCACTTCTTTGCTGAGCTACCAGATAAGGATTTGCACCAATATGATGTCACCATAACACCAGAGGTCACATCAAGGGGGTGTTAATCGAGCTGTAATGGAACAACTGGTTAAACTGTACCGGGAATCTCAT | |||||||||