| mature miRNA: ATTCCAGGCTCTTTTCACTGA species: Populus trichocarpa x Populus nigra database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52517826|gb|CV264851.1|CV264851 WS02025.B21_K15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra cDNA clone WS02025_K15 3', ATTCCAGGCTCTTTTCACTGA EST sequence (targeted fragment marked with yellow): CGAGGAAACTAGCCACAAAAGTAGCTTCCTTCATGATAAGCACACATCTTCAAATCCTGATTTGGGTGGCTGGAGCTTCCTCCAAGCTCTATCCACCAGTCCTGAAGGTCCCAAAGAATCAATGGAGAAAGAAAATATATACGTCCATCCTCTATTTAATCGTTCCTCTTCAGTGCTCAGTGAAAAGAGCCTGGAATTATGTACGGAGAATTTAGGTAGCGAAAGTGGAAGTGATATCATTGAAAGCAGCATTTTCTCACTGTCTTCATCAGACTCAAGAGTAGGAAATTCTCCAGCAAGGGAGCAACAGAAATCGCATCGACTTTTGGGAGCTAAGAAAGCGAACTCTCGTAGTTTTCCACCTCCATTGACAACGATGCGTGGATCAAAATCTCTACAAGTTAGGCCCCACCGCGAAGATGGAAGGTTGATAATCAGAGCCGTCGAGGCTCCATCAAGACACACTTGCTTACATGCTGAAAGAAAGGATGGCCGCCTTCGATTAAGCTTTGTCAAAGATTCCTCTTCTGTTTTTGACTTAATAGGCGTAGCCTCCACTGAAGAAAATAAAGGCAATAACAAAGAAGATGAGATTGAAAATGACATGGATTATGATGTAGATGACTGTGATGTTGGGGAAGGAAATGTTGCGTCCTTTGAAGAAGAGGTGGGAAGTGATGATTCGGACATTGATACTGAACCTGGAACGGAGGAGTTTCAAAGACCAAGAAGGTGCAAAGAAGGCGAAGTAGAGAACAAAGGATTGTTAAACTGGGAGCCTTTTTGGGTGGCTACATTATAACATTTTTATTTTGGATCTCTTAATTATAATAGTCAAATTCTCAAAAAAAAAAAAAAAAAA | |||||||||