| mature miRNA: TTGACAGAAGAGAGAGAGCAC species: Prunus armeniaca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|40714961|gb|CB818551.1|CB818551 EST 3640 Half-Ripe Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone be004i02 3 TTGACAGAAGAGAGAGAGCAC EST sequence (targeted fragment marked with yellow): CAAAAGTACGGCGGCGAGCCGTTTTTTGTCCCGAAATACGGAATTGGGTTCATCGGAAGACGACGGGTACATAATGGCTTTTGTGCACGATGAAAAAACGTGGAAATCGGAGCTCCAGATTGTGAATGCGGTAAATTTGAAACTGGAAGCGACGGTGAAATTACCATCAAGGGTCCCGTACGGATTTCATGGGACGTTTATAGAATCAAAGGACTTGGCAAATCAGGCATAGCCTAGTCGACTGTTTAATAGTGCTGGGTGGTTTTGCTGCTGTTGGTGGTGGCGGCGAAAATAGGAAGGGAGAAAATTACCAGAGGGATGGTAGAGAGAGACAGGGTCCCCGGGATTTCTCCTGGAATATTTAAAACCCTAACAACTTTTTTGTTTTTGTTAGGCTGTAGCTTAGCGTGTAACGTTTTTTTTGTTCACAGTCTTCTTTGTTTTGGTGACTGTAACTTTTTTTGATCGTCATGAACCAGCTTGTAGCTTTTGGACCGTAGGTAGCTTTTGCGAGCTCAGCTGGTTTATGTTTCTTTTTCTTTTTTTGGTCGAAGTTTATGTTTCTTCTTCTTCTTCTTCTTCTTTCAGTGTAATATTATATTAATGGAGAAGATCTCTCTCTCTTCTCTCAAAA | |||||||||
gi|40715404|gb|CB818994.1|CB818994 EST 1884 Green Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone ba006i18 3', m TTGACAGAAGAGAGAGAGCAC EST sequence (targeted fragment marked with yellow): CAAGATGGAGGAAGAGGAGGAGGAGGAGGAGGATAAAGAAGAAGANCAGGATGAAGAGGAGGATGATGAAGATACTACCAGATCATCCCCTAGTGTACGGTGAGGATGAGAGGAGGAAAAGAGTGTTGATGGTGAATAGTGCAACTACTACTCNTAACAAGAGAGGATCTGGTGCAGGAGGGTCTATGGCAAGGCCATCTTGTCAAGCAGATGATTGCAATGCTGACTTGAGTGATGCAAAGCAATACTATCGCCGCCATAAGGTCTGCGGTGTTCATGCCAAGGCTCCGGCGGTGCGTGTGGGTGGAGTTCAACAGCGCTTCTGCCAGCAATGTAGCAGGTTCCATAGCGTATCAGAGTTTGATGATAATAAAAGGAGTTGTCGGAGGCGTTTAGCTGGACACAATGAGCGGCGTCGGAAAACCTCCTCTGAATGTCATGGAGAATGAACAAAACCCCAGAGCAGGCATGGTTATTAAAAAGCGAGGATTGCTACATATCTCTCTCATATAAAATGCCTCTTTTGTACCTCTAGCCTAGCGTGCTCTCTCTCTTCTGTCAATCCTCAACCTTCATTATCCACCATTGAATTCTCTTTCTTAATTTTATGTACTTGAAAATTTGCAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|51502496|gb|CV045007.1|CV045007 EST 6714 Green Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone bga010g15p 3', TTGACAGAAGAGAGAGAGCAC EST sequence (targeted fragment marked with yellow): GTCATGAGTAAAATTAACTTAAACAAGCAGCTGAGGATGGAGAAGTCCCATGTGGTGGTCAAGGAGGAGGAAGAGGAAGATGAAGAATTTGATCATCATCAGCAACTGGAAGATCATGATAAGAAGAAGAAAGGAATTGTGGGTGGAAGTGGCTCTGTGAAAAGATCAGGCACAAGTGGAGGTGGGACGAGATGCTGTCAGGCTGACAGATGCCCAGCTGATCTGAGTGATGCAAAGCAGTATCATAGAAGGCATAAGGTTTGTGACCTTCATTCCAAGGCTCAGGTTGTGCTTGTTTCTGGGCTGAGGCAAAGGTTTTGCCAGCAATGCAGCAGATTTCATGAGCTGCCAGAATTTGATGACACCAAACGGAGTTGTCGTAGGCGTTTGGCCGGACACAATGAACGGCGAAGGAAGAATTCAGTCGAGTCTCATGCAGAAGGCCCGAGCCGCGATGGTACAGGCACTCAGTTAAAGGATGGATGTGGCCAGGGTGATAATAGTGGAAGAATTCGCATAACCATTCAAGGAAATTCCGCCTACAAGCATTTCCAGATCAGATGAGATTTGTCAAGCATGCTCTCTCTCTTCTGTCATCCTAGAGATGTAATAATAATTTTAGAGTTCCATGGTAGATATGTGTTCAGGATTTCTATTTAGGTGAAGCAAAAATTCCAATTGAACGAACGTTTCGATGCCGGAAATTGAATAAACGTTTAGCACCTTCAGATTAGCTGCTCGC | |||||||||