miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATCTCTCCTCTCTCTTCTTCT
species: Pseudoroegneria spicata
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|207510135|gb|FF346074.1|FF346074 BG02009A1C12.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
||||||||||||| .||..|.
TAGAGAGGAGAGAAGAGGGGG

EST sequence (targeted fragment marked with yellow):
CGGGAAAGCCCAACCGTGTGCCGTCCGAAGCGGGCCGCCGGCCCCACTCGCAGCCTCACACCGCACACTGCTATATCCGCCCGTGGCCCGTGGGGTGGAGTTGACCACAGACCTTCCTTCCTTCCTTCCACCATCCTCCCACCGCAGCGCAGGAGTGGCGGACGCGGGGGGAGAAGAGAGGAGAGATTCACGCGCGGCGGAGCCAGGGTTCCCGGCCGGCCACCTCCTTCCGACGTCTCCGCCCACGGAGCGATGGCTTTGACTTCGGCGCAACGGATCGCCCTCACGGTCTCCTTGTTTGGCCTCCTCGCGTTTCTGCTCGGCGTCGTCGCAGAAAACAAAAAGCCTCCTTATGGAACTCCTATCAAGGGAAAGGATGTTGTCATCTGCAAGTTCCCGAGTGACCCAACGATTGCAATGGGAAGCCTGTCCATTGTGGCACTTGTCTTAGCTGCTTTCATTGGGCACGTTGCCATCTTTTACCCGTACAAGGGCAAGTCGGTTCCTCGTGGAGCGTTATTTCAGAGCACCAGCTTGTCTGTGTTCTTTGTTGTTGCTGAGCTGGTGTCAGCTCTGGCTTTTGCAATGCTGCTCTGGGCAACGATCACGGAGGGTCACCATCGCACCAGTAACGTTCACCACGACATGGACACCCTGTGCCCCACCGCAAAGACCGGCCTCTTTGGAGGCGCCGCTTTCCTGGCCCTTGACGCTGCTCTGTTCTGGCTTGTTTGCCAGATGCTGGCCCTCAATGCGAGGGCTGACTATCTGGATGNNNATGAGGATGACAAGGGCGAATATGGCCAGGTTTATGCTGCTGAT



gi|207424745|gb|FF341889.1|FF341889 BG02010B2H10.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
.||||||||||| .|||.||
GGGAGAGGAGAGACGAGAGGA

EST sequence (targeted fragment marked with yellow):
GCCCGNNNAAGCATATATACGGATATACCTCCCGGCCAAGGACAGACAGGGAGGAAGGAGAGCAGAGAGGAGAGGGAAGGCGCCGCGACCGCGAGACGGGAACTCGACCAACAATGGAGTCCAGCGCCTCCTCGCCGCTACTGCTGTGCGTCCTGCTGCTCTCGCTCTTCTCAGTGGGCCCAGTGTCGGCGCAGCAAAAGTTCGGCATCAACTACGGGCAGATCGCCAACAACCTGCCGGACCCGACGCAGGTGGCGAGCCTGCTCCGGTCCATGAACGTGAACAAGGTGAAGCTCTACGACGCGGACCCCAAGGTGCTGACGGCCTTCGCCAACACGGGCGTGGAGTTCATCATCTCCGTGGGCAACGAGAACCTGCAGACCATGGCCACCAGCCCCGGCGCGGCGCGGCAGTGGGTGGCGCAGCACGTGCAGCCCTTCATCCCGGCCACCCGCATCACCGGCATCATCGTCGGCAACGAGGTGCTGGGCAACAACGACACCACCATGGCGGCCAGCCTCGTCCCGGCCATGCAGGCGGTCTACGACGCGCTCGTCGCGCTCGGGCTCAGGGGCCAGGTGACGGTCTCGTCGGCGCACTCGGTGAACGTGCTCGCCAGCAGCTTCCCGCCGTCGTCCGGCACGTTCCAGGAGGGCGTCGCGCAGTACGTGAAGCCGCTGCTCGACTTCCACAGCAAGACGGGGTCACCGTTCCTCATCAACGCCTACCCCTTCTTCGCCTACAAGGGGAGCCCCGCGAGCGTGTCGCTGCCGTACGTGCTGTTCCAGCCGAANGCCGGCGTGCGCGACGGCGGCCTGGTGTA



gi|207423560|gb|FF347865.1|FF347865 BG02020B1D12.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
|||||| ||||| ||||.|||
TAGAGACGAGAG-GAAGGAGA

EST sequence (targeted fragment marked with yellow):
CTACCATATCCCCATTCTCATTCTCCCCCACGCTGCACTGCAAAGAGCACAGTGGCCATTCTCATTCTCCCCCACGCTGCACTGCAAAGAGCACAGCGGAGAAGAGGAAGGAGAGCAGAGATGACTGCGTCCGTGTCCTACGGGCTGCGAGCTCTTCCGACGTGGTCCAGCTCTGTGTCCGGTGACGACCACTGCTCGGCGCTGGCCATGTCGGTGTCGGCGCGGGGGCCCCGGTCGGCACGGCCCCTTCGGACGCCCGCGAGGATGGGCAATGTAAACGAGGGCAAGGGCATCTTCGCGCCCCTGGTGGTGGTGGTGCGCAACATCGTCGGACGCAAGCGCTTCAACCAGCTGAGGGGCAAGGCCATCGCGCTGCACTCCCAGGTGATCACCGAGTTCTGCAAGACCATCGGCGCTGACCCCAAGCAGAGGCAGGGCTTGATCCGCCTCGCCAAGAAGAACGGAGAGAAGCTCGGATTCCTTGCTTGACCTACCTCACACCCCCCCCTCTCTTTTCCTTCTCCTACCTTTTTCTACTAGCAAAAGGGAATTATCAACAGCTATTCTATCTTTCCTTGGAGTTGGAGATTGCATGCATGTATGTATACTAGTCGTATATTCTTCTTAAAAAAAAAAAAAAAAAATGCGT



gi|207404669|gb|FF346780.1|FF346780 BG02019B1E02.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
|||||.|||||||||.||.
TAGAGGGGAGAGAGAGGAGCC

EST sequence (targeted fragment marked with yellow):
CGCAGCCGTACGCCGCAGATCTGCCGCCGCGCGCGCTAGGGTTTTGCGCCGAGGAGAGAGAGGGGAGATGGACGTGGTGAAGGCGGCGCAGCTCTCGGGGCGGACGCTGGAGAGGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTTGCCCGCGACACCCGGAAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCGTCGTCGACGTCACCAACTCCTACGCCGTGCCATTTGAGGAGGATGACAAGGACCCGAGGATCTGGTTCCTCGACCATAATTACCATGAGTCTATGTTCTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACTGGTCCAAAACTAAAGGAGAATGACTTGGATGTTCATGCATTGTTTACCAACTATGTTCCTAATCCTGTCCTGGTGATTATCGATGTTCAGCCCAAGGAGTTGGGAATACCCACCAAAGCATACTATGCTGTGGAAGAGGTTAAAGAGAATGCTACTCAGAAAAGTCAAAAGGTGTTCGTCCACGTGCCATCAGAAATTGCTGCTCATGAAGTCGAGGAAATTGGAGTTGAGCACCTTCTGAGGGATGTGAAAGACACAACAATAAGCACACTTGCAACAGAGGTCAGCAGCAAGCTTGCAGCCCTGAAAGGACTCGATGCGAGGCTTACGGAGATCCGGGGTTATCTAGATCTTGTAATTGAAGGGAAGCTACCACTGAACCACGAGATTCTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATC



gi|207487167|gb|FF345800.1|FF345800 BG02006A2G09.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
|||| ||||| ||||||||.
GAGAGCGGAGAAAGAAGAAGG

EST sequence (targeted fragment marked with yellow):
CCGTCTCGAGTTCCGTCTCACCTCACCTCCCCGATCCCTCTTTCTCCCTCGGTAGAGCCAGGGCGCGACCGCGCGAAGGAAGCAACGAAAGCCCAAAGCTGGCGCATCCTTAGCACCCAAGGGAAGAAGAAAGAGGCGAGAGAGCGAGGCGTCCCGGAGGCAGAGCCAAGGATCCATGGATCGGCCCCAGGTGGTCAGCGAGAACTATGCCAATCCTATAACATGCCTCTTCCATGTGCTCTTCAAGGCGTCGGCACTGGCGTTCTACATCCTCTTCTCGCTCTTCGTGAAGAGCTTCGTCATCATCTTTGTCATCACCGTTCTCCTCGCTGCGCTTGACTTCTGGGTGGTGAAGAATGTCAGCGGAAGGATACTCGTTGGGCTGCGGTGGTGGAATGAGATTGACGATGATGGCAACAGTGTGTGGAAGTTCGAGTGCCTCGACGGCGAGTCTCTCGCTCGGATGAACAAAAAGGACTCGTGGCTGTTCTGGTGGACTCTTTACTTGAATGCTGCTGCATGGATCATTCTTGGGATATTTTCACTCATTAGACTTGAAGCTGATTACCTTCTTGTTGTTGGAGTTTGCTTGACTCTAAGCCTTGCAAACATCGTGGGGTTCACCAAATGCAACAAAGATGCCAAGAAGAACATCCGAGCTTTTGCTGAAAATGCCGCTCAAAACGCCATCACATCCCGCTTCACATCATCCCTGCAGTCAGCATTCGGTATCTGAAGTCCAGATTACAGAGGCCCAAAATTACATACAACTGTGTACCATCTGGNCAAGNAGATCAGCTTGTGATATCCCGTTTTCATGTGATTTTGGCTTATATACC



gi|207488238|gb|FF354473.1|FF354473 BG02025A2C04.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
|||||||||||||||||||||
TAGAGAGGAGAGAGAAGAAGA

EST sequence (targeted fragment marked with yellow):
TGAACTTCCTGAAGTCTTACAAACGTCCTATTCCAAGCATTTACAGTACAGTCCTACAAGAACTTTTGGTGCAGCAACATCTTATGAGATACAAAAGTACCTATCAGTATGATCCTGTGTTTGCTCTTGGCTTTGTCACCGTCTATGACCAGCTTATGGAAGGGTACCCCAGCAACGAGGACAGGGATGCCATCTTCAAGTCATATGTAACGGCGTTAAATGAAGATCCTGAGCAATACAGGGCTGATGCGCAAAGGATGGAAGAGTGGGCTCGCTCACAAAATGGTAACTTGTTAGTTGAATTTTCTTCCAGAGATGGGGAAATAGAGTCCATTCTGAAAGATATATCAGAAAGGGCCCAGGGTAAGGGAAACTTCAGCTACAGCCGGTTCTTTGCTGTTGGCTTGTTCCGTTTGCTTGAGCTCTCAAATGCGACGGAGCCAACCGTACTAGACAAGCTTTGTGCTGCTCTAAACATCAATAAAAAGAGCGTGGATAGAGACCTTGACGTTTACCGCAACTTGCTCTCGAAATTGGTTCAAGCCAAGGAACTTCTCAAGGAATACGTCGAGAGGGAAAAGAAGAAGAGAGAGGAGAGATTGGAGACGCCCAAGCCGAATGAGGCTGTTGCAAAATTCGATGGAAGCGCTTATCCCTTGAAGCATTAACTCAACCTTTCCCCAGAGGACAGCTTGTCCGGATAACAGATATTAACAGTTATACATCTGGATAGCGTTGAGAACTATGGGGGGCATCTTTGGCTGCTCTTTGCGTGGTGTAGTACTCGGCCGTACAAAAAG



gi|207423909|gb|FF341555.1|FF341555 BG02011B2D09.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
|||||||||||||.|||.|
GAGAGAGGAGAGAGGAGAGGT

EST sequence (targeted fragment marked with yellow):
TGCCCTGTACATGTCCCAGATAATGGCTCCTGCAGCAACAGCGGGGGCTCCGGGCCAAGCTTCCCGTGGCGGCCGGCCTCCTGCAGCATCTCGGCGGTCTTCTCCCTCGCCGCCGCGCTCGGCGCGGACTGCCCGCGGCGCCCGTCACCCTCGGCCTTCCTCGCACCGCCGCCGGCCGCGCCCATCCCGGCCATGCGCCCGCCGCCCCGGCCGCCGCGCGCCCGTCCTGACCAGCCCCGGCAGCTGCGCCTGGTGGAGATTCCCGTGGTGGCCGTCTCCCTCGCCTGGAGAGGAGAGAGGAGAGAGAGGACAGAGGAGAGACGCTGACAGTGGGGCAAAGAAGGAAAGAGAATAGCACCGGACGCCCGAGTGTCCCCCGGTGCGCTGGGTTTCACCTGGGGTCGCCGGATGAAATTTTGGGCGAATCCGGCGAAAAACGAGGTTTTGGGGTCACGACTGGGCTAATTTTTAGCCGCCGGCGCTAAAAAAGGGCCTCTGAGGGGACTGTTGGGGGCGCCGCTGGAGATGCCCTTACTACTAGGTGGAAGATAGTTTTTGATTGATGGAAAGGGCTATCAGATCGCAAGTAACGTTCAGAAGAAGCAAATTGTGAGCTAAATTATTTTTATGGTTCAATTTATAGCAGTAGAAAAACCATTTTAAAAAAAAAAAAAAAAAATGC



gi|207505283|gb|FF343919.1|FF343919 BG02005B2B02.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
||||||||.||| ||.||||.
TAGAGAGGGGAG-GAGGAAGG

EST sequence (targeted fragment marked with yellow):
ACCGATTTTTTTTTTTTTTTTTTACACTTAGATCATAATTTTTCGTCGTCATCAACATCGAATTCGTCCTCCGATCGATTCTCCCAGCACAAACCAAACCAATGGAGAACAACCATAACAAACCCACGGGAGGGAACAGAGGGCGAAACAAACCAGCCAGCATGGAAGAACTACTCAACCAACCCTAAAGAAACAGCAAGACGAATCGAACACCTCGATCTAGCGGTCGACGACGCGTCGCCGTCGTCAGGCGCGGAAGCAGCCGACGAACAGCGGCAGGTGCAGGTGGCTGTGGCCGTGGCCGTGGCCGCTGGTGGCGCCGCAGTCGAGGTCGACGAGCTGGTGGTGCTGGACGCCGAGGTCGCGGTCGATGAGGTGCTCGACGTGGACGAAGCGGTCGACGCGGCAGGGGATGGCGATGGCGCCCTGGTGCCTGAAGCCGTACTCGCGCTCCGCCTCCTCGAGCAGGGCGCCGAACAGCGGGTGCTTGAGGTGGTCCAGCGGCACGGCGAACCGGCGCTGCTCCTCCCCCTCCGCCCCCACGCGCACCGTCACGCACCCCTTGGGCGCCACCATCTCCGCCCTGTGGTGCTGCTGCTGCCTGAGGTGCATCGGAGGCGAGGACCGGAGAAGACTTGTTGAGGAAGGAGGAGGGGAGAGATTCGATCGGCG



gi|207408359|gb|FF359127.1|FF359127 BG02032B2B10.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
|||||||||||| | ||.||
AAGAGAGGAGAGATACGAGGA

EST sequence (targeted fragment marked with yellow):
ACGCATTTTTTTTTTTTTTTTTTTACTTATGAAGGAGCATAGAGAGGAGAGAAGAGAAGAGGTAGTTAGAAAATTGAATATCCTTGGTCACCAGCGTTCCTTGTTGCACACCACCATCCTGCCGTGCCGTCTTATACATACACCACCTTGCACCCCGGGCACAGCGGGGCGCAGTCCGGATATATATACACCTCACCAATGCTATACCAGGACTAACACACAACAGACATGTCTCACCCTGTACTCATGTAACTGTACGGTCTCGAACACAACAGACGTTCTTCATGCAACCAACGTCCGTATTCACCTTGGCCGGTCATGAGCTGCTCCTCAACCTCTCCAGTCTTTCAAGGTGAGACTTGAGCCAGGCAAACTCGTGTCGCATCTTCTCCATGTGCGCCTCCGCCATGTGCATCTCCTCGCTCAGTAAGCTCACTCGCTTCTGCAACCACTCTATGCTCTCCTTGCTATATGAACCCAAGCTGCTCGCAGAAGCCTCGGGACTGACCATGAGGACCTTGGGGGATCTACTCAGCAGAACGATGATTGTTACCTGCATCAAGATAACGATGGCCACCAGCATCACTGCTAAAACCGGACCAAATTGACTAGATCTCATATATGAGGCGAGTGAGCCCCACAATTCTTGTGAAGTGGATCCCAAAGTGCCTACGCTTTGTTGACGGTGTTCAATGGGAGGGACAAGACTACTCAAACCAGAATCGTATGGTGCCGAAGCCATGTATGCGACTGTATTTTCCAAA



gi|207401899|gb|FF363343.1|FF363343 BG02034B1A02.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
||||.||||||. |.|||||
AAGAGGGGAGAGGAAGGAAGA

EST sequence (targeted fragment marked with yellow):
CAGCCCCCTCCACCACCACCACCAGAGGAGTAAGCAGGCAGCAGCAGCGGCAGCAGATCGCGAGAGCGGAGGAGCAGCAGAAGGAAGGAGAGGGGAGAACGATGCTGCCCACGACGGCGTCCAAGGGCCGGGGGGCCGCCCGCTCCGCCCCGCCGCTCTTCGGCCCGTATCTCCGCCGTATCGTCAAGTGGCAGCAAATGGATATCGAATACACGTTTTGGCAAATGGTTCATCTCTGTACTTCACCAAAAGTAGTCTATCAGCACACCAAATATCACAAGCAAACAAAGAACCAGTGGGCTCGGGATGATCCTGCATTTATTGTCATTCTAATTCTTTTCCTTGTGTTTGCGACATCAGCTTACTGTGCAGCGTTTGGAGAGAGTGCGCCCCATGCTGCTTTAACAATCATCTCGGTTGTGTTTGTCCATTTCTTGTTTGCTGGGCTAGTTTTGGCCACACTTTGCTGGTTTCTTACCAATTCTTATCTGAGGGAGGAACCTAATAGCCATGTGGTCGAACAACGTGTCGAGTGGCTCTATGCATTCGATGTTCACTGCAACTCATTCTTCCCTGCATTCGTCATCCTATATGTGCTTCAATACTTTTTGTCGCCTCTGTTGATCGCACATGGATTCTTGCCTGCCCTATTATCAAACCTTCTGTTCATGGTGGCAATTTCGTATTATCACTATCTGAACTTTCTAGGATATGATGTTCTTCCATTTTTGGACCGAACGACATTTTTCTTGTACCCAATCGGACTTGTCATCATACTA



gi|207422418|gb|FF352886.1|FF352886 BG02028A1A01.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
|||||| ||| ||||||.||
CAGAGAGAAGAAAGAAGAGGA

EST sequence (targeted fragment marked with yellow):
ACGCATTTTTTTTTTTTTTTTTTGATAGAAAAGCGCATAGTTATGACGGATTCATGGCAATGATCATGTATATAGGCATCACGTCACGTCCGAGACAAGTAGACCGACCCCTGCCTGCATCTACTACTATTACTCCACCCATCGACCGCTATCCAGCATGCATTTAGGGTATCTTTACCTAATAATAAAGAGAATTGGGTTTCTGGTCGTCCGTCGTCGCCACTTTTGCAGATAAGTTCCTGCGTTTTGGGGTATTCAACCCGCAGTCCACCAAGTAAAAAACGATTCGCCAGGTGATCCACTCCCAATTTCCCCTCTGCGCCTCCACGCGCCCGACCGCCCGATTCCGCGCCTCCCGCCGGAGACCGCCGCCGACTAGGGCCACGCCGGCGATTTCCCCTCAGCCCGCCTGCCTCCTCTTCGGCGTTCATGCCGGCGGCGACCTCCTGTGCTGTGCAGCGGGAGAGAGCTTTGAGTAAAGGTGAGAGGAAGGAGAAGAAAGAAGAGAGACGGGGCGAAGGGCGAGGTGCTGCAGGTGCTGCACACCGGCCGGAGGACGGCGAGGGCGGAGCAAGGCGGCGGCGGACTGGGCCTTGGGCAACGCGGTCGGATCGAGCAGTGCTCGATGCAGAGGCAGGCACTGGCTCGCTGCTTCTCCTG



gi|207492149|gb|FF352949.1|FF352949 BG02026B1F09.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
|||||.|||||||||.||.
TAGAGGGGAGAGAGAGGAGCC

EST sequence (targeted fragment marked with yellow):
CAGCAGCAAGCAGCAGCAGACACCCAACCGCAGCCGTACGCCGCAGATCTGCCGCCGCGCGCGCTAGGGTTTTGCACCGAGGAGAGAGAGGGGAGATGGACGTGGTGAAGGCGGCGCAGCTCTCGGGGCGGACGCTGGAGAGGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTTGCCCGCGACACCCGGAAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCGTCGTCGACGTCACCAACTCCTACGCCGTGCCATTTGAGGAGGATGACAAGGACCCGAGGATCTGGTTCCTCGACCATAATTACCATGAGTCTATGTTCTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACTGGTCCAAAACTAAAGGAGAATGACTTGGATGTTCATGCATTGTTTACCAACTATGTTCCTAATCCTGTCCTGGTGATTATCGATGTTCAGCCCAAGGAGTTGGGAATACCCACCAAAGCATACTATGCTGTGGAAGAGGTTAAAGAGAATGCTACTCAGAAAAGTCAAAAGGTGTTCGTCCACGTGCCATCAGAAATTGCTGCTCATGAAGTCGAGGAAATTGGAGTTGAGCACCTTCTGAGGGATGTGAAAGACACAACAATAAGCACACTTGCAACAGAGGTCAGCAGCAAGCTTGCAGCCCTGAAAGGACTCGATGCGAGGCTTACGGAGATCCGGGGTTATCTAGATCTTGTAATTGAAGGGAAGCTACCACTGAACCACGAGATTCTGTACCACT



gi|207388255|gb|FF359775.1|FF359775 BG02037A2G02.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
||||||||||||| .||..|.
TAGAGAGGAGAGAAGAGGGGG

EST sequence (targeted fragment marked with yellow):
CCACCCCATCGCAGGAGTGGCGGACGCGGGGGGAGAAGAGAGGAGAGATTCGCGCGCGGCGGAGCCAGGGTTCCCGGCCGGCCACCTCCTTCCGACGTCTCCGCCCACGGAGCGATGGCTTTGACTTCGGCGCAACGGATCGCCCTCACGGTCTCCTTGTTTGGCCTCCTCGCGTTTCTGCTCGGCGTCGTCGCAGAAAACAAAAAGCCTCCTTATGGAACTCCTATCAAGGGAAAGGATGTTGTCATCTGCAAGTTCCCGAGTGACCCAACGATTGCAATGGGAAGCCTGTCCATTGTGGCACTTGTCTTAGCTGCTTTCATTGGGCACGTTGCCATCTTTTACCCGTACAAGGGCAAGTCGGTTCCTCGTGGAGCGTTATTTCAGAGCACCAGCTTGTCTGTGTTCTTTGTTGTTGCTGAGCTGGTGTCAGCTCTGGCTTTTGCAATGCTGCTCTGGGCAACGATCACGGAGGGTCACCATCGCACCAGTAACGTTCACCACGACATGGACACCCTGTGCCCCACCGCAAAGACCGGCCTCTTTGGAGGCGCCGCTTTCCTGGCCCTTGACGCTGCTCTGTTCTGGCTTGTTTGCCAGATGCTGGCCCTCAATGCGAGGGCTGACTATCTGGATGAGGATGAGGATGACAAGGGCGAATATGGCCAGGTTTATGCTGCTGATGCCGATGGCACGAAGGTCTGAGTCGGTTAACTGCAGGATTTCAAAACTAGCACCGTTTAGATATATTTTAGATTCATTATGCGTCTTTGAAAAGGTCGGTTTAGTTCTCCAAA



gi|207504693|gb|FF348811.1|FF348811 BG02021B1A12.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
||||.|||||||||. .|||
GAGAGGGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
ACTCNNNNNNCATCACAGAAGAGAGAGAGAGAGGGGAGAGCGTCTGCCGCCTGCGGTAAGCAATGGCCAAGGAGGTGAGCGAGGAGCCGGAGCACGCGGCGCCGGCGCACAAGGACTACGCGGACCCGCCGCCGGCGCCGCTCTTCGACATGGGGGAGCTCCGGATGTGGTCCTTCTACCGGGCCCTCATCGCCGAGTTCGTCGCCACGCTGCTCTTCCTCTACATCACCGTCGCCACCGTCATCGGCTACAAGGTGCAGTCGGCGGCCGACCCGTGCGGCGGCGTGGGGGTGCTCGGCATCGCCTGGGCCTTCGGCGGCATGATCTTCGTCCTCGTCTACTGCACCGCCGGCATCTCCGGGGGACACATCAACCCGGCGGTGACGTTCGGTCTGCTCCTGGCGCGCAAGGTGTCGCTGCTGCGCGCCGTGCTCTACATCGTGTCGCAGTGCGCGGGCGGCATCGTCGGCGCCGGCATCGTCAAGGGCATCATGAAGGACGCGTACCAGGCCAACGGCGGCGGCGCCAACATGGTCGCCTCCGGCTTCTCCCGCGGCACCGCGCTGGGGGCCGAGATCGTCGGCACCTTCGTGCTCGTCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCAGCGCCCGCGACTCCCACGTCCCCGTCCTCGCCCCGCTCCCCATCGGCTTCGCCGTCTTCATGGTGCACCTCGCCACCATCCCCATCACCGGCACCGGCATCAACCCCGCCAGGAGCCTCGGCGCCGCAGTCATCTACAACAAGAAGGCCGCATGGGACAACCACTGGATCTTCTGGGTTGGCCCGTTCGTCGGCGCGCTGGCGGCGGCGGCATAC



gi|207504988|gb|FF365440.1|FF365440 BG02045B2A01.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

ATCTCTCCTCTCTCTTCTTCT
.||||||||||.||.|.||.
GGGAGAGGAGAGGGAGGGAGG

EST sequence (targeted fragment marked with yellow):
TGAATGTGATGATGGCCAACTTTGCTTGCANNTTGCAACCCCGGAAACGAACATTCTCTCTCGACGACATAGAAAACTAGAAAAGAAAAAAGAAGGCCCCATGATGATCTCACGCTAATGACTAATCTACTCGCAATGGATGCTCATGAGTCCATCTCTTGGCTGCATCCCTCGCGCATCCGTTCTGACCACCACCGTCCATCGACCGTCCGTCTGCCTCTAACAACTCGCCAAGAAGAAGAAGAAGATGGCCGGACTAGCGGTGGACGATGTGGGAGCACTTGGCCTTGATCCAGCGGAGGCCCCTGCGGAGGGACGCCTTCACCTTGCCCTCCACGGCGTAGGCCTTGTAGCTGGCCACCCTCCCCCGCCGCTTCATCTCCGCCTGGTCCCCCACGAACCACGCCACCGACGACGACGCCGCCGCCGACGCCACCCACCGCGCCCCGGGCACCTTCCGCTCCACCACCCCGTACTCGGCAGCGTAAGGCCGGTACGTCGGCGCCATCCCTTACTTAGCTGGAGGGGAGGGAGGGAGAGGAGAGGGAGGT