miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TACTCCCTCCGTCCGAAAAAG
species: Pseudoroegneria spicata
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|207473861|gb|FF341677.1|FF341677 BG02008A1A03.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
|||||||||||||| |||| .
ATGAGGGAGGCAGGATTTTAT

EST sequence (targeted fragment marked with yellow):
GCATTTTTTTTTTTTTTTTTTGCCAAACAAGTAAAATGGACAGGCCAAGTAGGGATCAACCACATTGGTACGCGATACATGGGCAACCATTGCCATGGAAAGAATCAATCAAAAGCCCAACCAAGGTCCAACCTTTGATCACTGCTAGTTCATTATCAAATCACCAACGTCAGCCATGGTAGATATATACTACTCCCTCCGTCCCAAAATAAGTGTCTCAAGTTTAAACTTGAGACGAGACACTTATTTTAGGACGGAGGGAGTATATAGTAGATTAGATAAAGAACCGGAGCTGACCAGCTAATCGTCAACCCCAGGAACGGGGGCTCCTCGCCTTGACCTGCTTGTTGATGCGGAGACGGAGGACGATCCCTCATTCCTGCGGCGGCACGTCGGCCGACACTGGCAGGTACCTGCCGCCCGCGTCCATGGCCGCCTCCACGCCGGGGACGACGCAGCTCCTCACCTTGGCGTCCAGCATCAGGACGTCCATGTGGTCGGTGTCCGCGTCCACGGGAGTGTGCACCCACACCTTACATCTGTACCACCATGACGCCGCGCTTGCTCGCCGCCAACAAGAACAGCTGCCCCCGCTGTGCCGGCTGCATCTGGACCTCCAGCTCCAGCATGGACCCGTAGGCGATGTCAGTCACGGGCCACTGGTGGCGCTCGGC



gi|207511766|gb|FF358169.1|FF358169 BG02032A2D08.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
|||||||||||.|| | ||||
ATGAGGGAGGCGGGGTGTTTC

EST sequence (targeted fragment marked with yellow):
AAACGTTATTATTATTAAATAGATGGATAGCTAGCAATAGTAACGATAGCCCACAACATAGTATAAACTGCTCCCTCCGTCTCATAATATAAGAACGTTTTTGCATGCTTTGTGGGGCGGAGGGAGTAGTTCACATATCCTCGTATAATACGAAGGAAAAACAATCATTATTTATAGGTCTCACGAGTAGCGGGAGAGGAGAGTGGTGCAACGTACGGCTCCGCCAAATTTGCCATCCCTAATAATCCTTGATGAACGAGCATACTCGAGCCTCCTTGTACACCTTTCCTGGCCTGCAGAAGTAGCCCTGCTCCGGAGCGCAGTGCGAATCGTTGGAGCAGACGCAGAGTCCTTCGATGGCGCAACGCTTTTTGATGATGTTGGGGCTCCCATTGATACCGAGCACCTCGTCGGTCCACTCGCTGGAGAAGAGCCCCTCAGGGTCGTACCTGTCTTTCACGCTAAGGAACTCACGGGCTTTCGGGTACTTTGCGATGGCACCGTCGAAGGCGAAGTCGCGGTTCTTGCCCCAGTGCGGAAGGCCGCCATACTTGCGCAGCGCCATCTGCTCGATC



gi|207434220|gb|FF340070.1|FF340070 BG02003X1G09.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
|||||||||||| | |||| .
ATGAGGGAGGCAAGGTTTTAT

EST sequence (targeted fragment marked with yellow):
CTGTGTACTTCTTTCCATGCTGCTCCGAGCTGGTGGATGAGATCAAGCCTCGTTGGTTGTCCAACAGAAAAGGGTTCCGGTGGGCTGCAGCGAAATGCACCTAAGGTACAGTCATGGTTGTTTAGCACCAGGCAGCTTTTAATAGGACAATATCAACATTTTTAAGTCATGCAAAGAAGAATCACATGTTCCTAAAAACAGAGAACACTGAAGCAGAAGTTGATAATTAACCCCTCTGCAAATATTTTGGAACGGAGGGAGTATTAACCAGTGTCTGGGAAATGGTGTTTGTGTTCTATGATGAAGATCGTGTAATTATTTGCTCCATGCAAGCATACATGTGCTATAACATTGTTCTTGATGATATCCTGAATAGATCTATGGAGATTTTCATGGGTTCCATTCAGTTATCTTACTAATCTTATTAACCCTGATGCAGATATATTGGGAAACCACTCCATCTAACTGTCTGTCCTTCATAGATATCATTACTGAATTAGAGGTTTCTGGCACCAGATCAGGTACCACCATGACAATTCTTCAGAGTTGTTTTCAGACGAATCCCTGTCTAGGTCTTCAGATTCTTATGTTTTCCACCCTTGTTACAGGAGCAAACATGAAGATACTGTGGAGACAAGCCAAGAAGAAGGAACAGGCAATGAAGAGTGGCCCCTCTGCTCATACTCCATGACAGTTCTTCCCATTAACTGATCGGCCAAGCGAGGATAGGGGTTGATGGCACTAGAAAAGTAGTGTCTCGCCCGATTTTGTCATTGCTTCTTCGGACCTGATTGTTACGGTCTCATTCTCAGTTTCCGTTACAGCTCTAGTC



gi|207422044|gb|FF360489.1|FF360489 BG02038A2F02.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGT-CCGAAAAAG
|||||||||||| |||||| ||
ATGAGGGAGGCAAGGCTTTATC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTACAAAAGCTAAAACGACCTATTTCGGAACGGAGGGAGTACATCACACTCACATAACACACACACGCACACATACATTGATACATATATTACATACATCTTGTTCATCTGCCCATCACGAAGTTAAGCAAAGTAATTAAAGCTCAAGACGGTCAGACCCTGGCTGTGGCGGCGCCGGTCCCCATGCCCTTGTGATGGTGGTCGCCGTACTGGTGCTCCGCGCCGTACCCGTCGCCGAACTGGTTGCCGAAGAGCCCGGCGTGGAGCGCCATGACGTAGAGCAGCTGCGTGAAGGCGAGTATGATGACGAAGGCCTCGAGCACGCGGAGGCGCCAGCCGCGGTGCCCGCCGACGTGGATCTCCTTGCACGCGAGGCCGAATGCGAGCGCGGTGATGGCCCAGGCGACGAGGGCCGAGGACGCGCTGGTGGCGAGGCTGTCCCCGCGCCAGGTGCGGACGTGGTGCACGCCAGCGAGCTTGGAGGCGGCGCCCACGACGCCGGCGAGGATGGCGAAGAGGAGGAAGTAGAAGGTGGCGCCGTTGCCTGCCACGCCGGCGTAGTTGGTGGTGCCGTTGATGAAGTGGTTGAGGTTCCAGCTGGCGAGGCCGATGACGACGATGTACATCACCAGGTTCAGCACCAGCAGCGGCGCCACCATGCTCCGGCTCACGCCCGCCATTTCTCGATCGATGGAGGGCCTGCACCTGCCTCACTTGCTGGATGGCTT



gi|207386708|gb|FF359759.1|FF359759 BG02037A2F05.r2 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
||||||||||||| |||| .
ATGAGGGAGGCAGAGTTTTAT

EST sequence (targeted fragment marked with yellow):
ACCGATTTTNNNNNTTNNTTTTTGTACTACCATATAAGTTAAATATTGTAGACTAACAGTCGTTAAAGCTACGGTGTTTCAGGAAACAGAGACACCAGGCATGCCCGGAACTACTACATCCCACAATAACAATATACTCGCTCAAAGTTAGTACAAACTTGAGTCACTTATTTTGAGACGGAGGGAGTACTTGAAATGCACATATTGGAATCTGCAGGGCTCCAAATGTATGAGCAGATCAAAACAAGTTCCCACAGATCAAGCTTAGGATCCTACAGATCCAGCTAAGTCAAGCAACAAAACACCACAAAAGGGGACCTTGCTTTTCAGTCCCCCGGAGACCCGGGATCTCCACTCTACACGCACGGGAGTTGTCGAAGCCAATTGAAATTCAGCATGAAAGAGGGCTTCACTCGTCATCATCTTCCTCCTCTTCTTCATCTTCATCATCGTCTTCTTCATCAAATCCCTCTTCATCCTCGTCATCTTCAAATTCATCTTCAGCCTCATTGTTAAAATACTTCAAAGGATTAGGCCACAACTCTTCCTTGATAACATCTGCCACCTCATCCATCACTCCATCAGAAAAACTTTTGTTCTTTGCATCATTGAACCAAGTGAAGAAACTCTCATCAATCAATAGTCGTTTCTCCCCATTCTCTGTGTACGCCTTTCCATTTGCAATGTCCATTCCATCCTTCCAATTGATGGAGGTGGCCTTTACAGTTATTTTTCCATCATCACTGAACGAACATGTTTTCGTAAGCTTCGTATCTTCAAAATATGGA



gi|207494704|gb|FF363023.1|FF363023 BG02037B2C10.r2 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
|||||||||||.|| |||| .
ATGAGGGAGGCGGGGTTTTAT

EST sequence (targeted fragment marked with yellow):
TTTTTTTTGATTCGAATGTATTATTGGTAAGATAAGGGGAACATGGGGGATGTATACTGGTACAATATTCGAGTACTCTACAATATTTACAAGCACAATCAGAGAGTTGCTCCAGTCAAGTCCCAGAGTTGTGCTGTTGTTTCACCTCCATAGATCCACAAGCGAACTAGTTTTCCTACATAGTACCAACTTTACTAAATCAGCGAAACTTATTTTGGGGCGGAGGGAGTACCTTTTACTTTACCACTTCCAGTCAAACTCTACTGAGGCCTATATACTTACAAAACTGTACATGCCATTAGAATAACACAACACCTGGCACCAAGTCTCAACGGTTCCGAAAAGTTGTGAGCAGTCACAAATTCCAAATTCCAGGTTTCTCAGTGCGGCAGACCGTGAGCATCTCATCATACTTCGAAGCATTGACGAAGCCCCACAACTCAACATGTCTTCAAAGTCCTGGGAAAGTGACAGGCATGGGTTGTTAAACGTTTCTGAGGTGGAACTTGAACCATTCAGGAGGTCTTCACCGAGATAAAGTGCAAAGTGACCACCACCTCCCATTGCCAAATACTCAGGGGAGCAAAACGTGAAATAGTTATTAGCACCTGTTGGACGGTATATAACAGGACGACCAGCTACATTGGTGAACACGAAGCAGTTCTTGGTCCCCTGATACTTCCTTTGCATGATCGGCCGCAAAGGGGCCTCTACTAAACCACCAAAAACTGCTCCCTTTTTATCCCCAATTATCNGAAGTGAATCACCAGCGCAAAGCATGCTCCTTCTGTAC



gi|207479187|gb|FF348576.1|FF348576 BG02021A2G09.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCG-TCCGAAAAAG
||||||||||| |||.|| |||
ATGAGGGAGGCTAGGTTTATTC

EST sequence (targeted fragment marked with yellow):
ACGCATTTTTTTTTTTTTTTTTTGCTGCGCAGCAAAGCACGATTCTAGTGAAGTATCCAAACATGCCTAAAAGCCATAGAACGTCTGCAGAACAGACACTAACATATGGTCCCCACGTGTCGACAAGGGTTACATTTGCTGTCTTGTAGAGGAGTCCATCCTATAAGGTTGGCAGGCTTCCAACACGGAACATTGATTTGTGCCCAAAACAGTATTCGAAAAACAGCACAGGCAGCAAACTAGTCGGTCTTAACGAGTACAATAGTGTGCAACTTGAACTACCACTGCATGCTACTCCCTCCGATCCATAATAAGTGTCGCAGTTTTGAACCAAGGTTGAACTAACCTTAGTTCAAAACTGAGAAACTTATTTGGATCGGAGGGAGTATTACACAACATAGCACAGAATGATTCCCAGATACAGACGCAGAACATAATAAGACTTAAGCAAGCCACAGGTTACTTCTGCCATCTCAAACACGCAATGATATGGAGATTGTGTGGCCAATCAAGGGTGTGACTGCATCTAAAAGAGCATGACTTTCTTTCCCTTGAAGTAACCGTATCTCGGCGCGCGGCCAGATTTGGGATCAAAGACATCATCATCATCAGATTTATCCTCATCCACATAGTCAGGATTGAGCCAGCACGGCATGGGCACAGGCCACCTGTTCAACTTATTTTTGTCATCATCCATTTT



gi|207463722|gb|FF349202.1|FF349202 BG02016B2C05.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
|||| ||||||||| |||| .
ATGATGGAGGCAGGGTTTTAT

EST sequence (targeted fragment marked with yellow):
ATTAGATTCAAATTTTTTAGAAACTTGGTAGCAAAGGTCTATTTTTCTGTTTTGATTTATTTCTCATGTTGAGGAACAATGGACAACAAAAAAAGAGACAGAAGTTCTACAGTGACATGTTTTGTGATGGCAGTAGCTACACTATGCTTGAAACAAAAATTCACACATCAGATACCTTTCTTTATTTTTTTTAAAAAAAATTCTCAGGTCGAAGCTGTTACTGTGCATGCGACTCAGAAGTACTTTGTGACCGCTGCCAAGGATAATACTTGGTGCTTCTATGATATTTCAACTGGGTCTTGCCTCTCACAGGTTGGCGAGGCTTCAGGACAAGAGGGATATACATCTGCGTCTTTCCACCCAGATGGTCTCATCCTTGGAACAGGAACTACTGAAGCTGTTGTCAAAATTTGGGATGTGAAGACTCAGGTTGGTACTGCAATTGTTTTCAGGAATAATTTCAGATGGTCATGCATATGTTGGTGCTTGAAATATACTACCCCCGTCCCAAAATATAAGACGTTTTTGCAGTTCAAATTTGAACTGCAACGTCTTATATTTTGGGACGGAGGTAGTATTTCCTAATGGACATTTTTTTTGTCTGTAGTCCAATGTTGCAAAGTTTGAGGGGCATGCTGGACCTGTCACTGCTATGTCCTTCTCTGAGAATGGTTACTTCCTGGCGACTGCTGCTCTTGATGGTGTCAAGCTTTGGGATCTAAGGAAATTGAGAAATTTTAGGACTTTCTCGCCATATGATTCGGACACGCCGACAAATTCTGTGGAATTTGATTTTAGCGGTACCTATCTTGCTGTTGC



gi|207503454|gb|FF357065.1|FF357065 BG02030A1H11.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
|||||||||||||||||||||
ATGAGGGAGGCAGGCTTTTTC

EST sequence (targeted fragment marked with yellow):
CACAAATGAGCTGGTTTTACGTGACCTACCCGAAGAAGCCATTCTCTTGAAAGTCAACAATAAGATTCCGGGACTTGGGCTCCAGTTGGATGCTTCAGAGCTCAACCTACTTTACAGGGATAGGTACGACGTTGAAGTTCCAGATTCATATGAGCATCTTCTTTTGGATGTTCTAGATGGCGATAGTCATCTGTTCATGCACAGTGACGAATTAGCTGCTGCATGGAGCGTATTGGCACCTATACTCCATGAGATCGACCAGAAGAGGGTTGCTCCTGAGCTCTACGAGGCTGGGGATAAAGGACCAATTAATGCTTACTATCTCGCAGCTAAACATGGAGTCCGATGGGATGATGGCTGCTGAGCTGATACTTGGGAGCTGCTCAATGTATTTCGCTTCCTTCTCTCTGTGTAGCAAAATCTGTTCGGTGAACTAAAACAAGAAATGGAGAAAAAAGGTATTTCTTGCTTGTTGATTCAAACCCTTCGAAGGTGGATCAAAGCCACTATTACTGACCGAGCTGATATGTTGCACCCGACAATGAGGATGGAGGCGAGCATTGAGCGAGTCGTGTGGGGTGACTTGTGTAAATTGGACCTTAGTACTCCCTCCGTCCGAAAAAGATTGTCTCTCAAATGGATGTATCTAGCACCAAGTTAGTGCTAGATACATCCATTTGAGGCACAAGCTTGGGACAAGCTTTTTCGGACGGAGGGAGTATGTGCTAATAGTTGCAAACATCTTATGGAAATGTCTCGGTGTCATGTTAAAAAAAA



gi|207396593|gb|FF365494.1|FF365494 BG02043B2D04.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCC-GAAAAAG
|||||||||||||| | |||||
ATGAGGGAGGCAGGGCGTTTTC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTGAGTCAATTAAAAACGACTGGATTAAAGGCAATCTGCATTGGGAGTGTAGATTGGCACTCTTTCTTGGACAATTTTTGAATGCTAGATGTGCAGTCTTTTGCGGGACGGAGGGAGTACAATGAAGGATAGTAAAGCCAGATGGAGGTAGTGAACAATTGAACTTGAGCACTCTTCAATCTTCATCCAACTCTGTGGAGTATGCCGTCCGTCCTCACTCACTTGGCCACCGCGGCCTCCTTGCAGTCCTCTTTCCCGAAGGCGGAGACGGGGAAGGTCCTCCCGAGCCCGGTGGGCGTCTTGAAGGTGATCTTGGAAGGGTCGTCTTTGTCGATATACATGTCGCAGAGGGTGATCCAGATGAGGAGCTCCTTGCTCTTGACCCCGGTCATGCGCTTCATCTTGCGGTCCTCGACGAAGGCCGTCACCTCGGCGGCGTACGAGACCTGCCGCCCGATCTGCTTGAAGGTGTGCGTGAGCGCCTTCTTCTGGCGCAGCCAGACGAAGCCACTGGAGCGGTTGTAGCCGACCTCCTCGATGTCCGCCAGCGGCAGCAGGCCCAGCGGCATGTTGGTCTCGGCCAGCAGCTCCACCGCCTTCTCCGCGCACAGCACCGCGCCGTGGTACACCTCCGCGCCCTCCCTCTGAGCCTCGATCACCTGCGCCATCTCGACTGGAGTTGCTGGGGCC



gi|207511062|gb|FF356011.1|FF356011 BG02027A2C04.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
|||||||||||||| | || .
ATGAGGGAGGCAGGGTATTAT

EST sequence (targeted fragment marked with yellow):
ATGATCCCATTCGAGTTAAACGGTACACTGGCCATAAGCGCAGCCGGTTTGTGATAAGGTCATGTTTCGGTGGATCTGAGCAGGCCTTTATTGCCAGTGGAAGCGAAGACGCAAAGGTACGATATATTGACTGTGGACGCAAATAAATCAATAAATCATGTTGTCTGCACCATTTCTATTTTATTACTCCCTCCATACCATAATATAAGATGTTATTACAACCAATATGTGAGTGTTATTATGACGCTTATATTATGGGACGGAGGGAGTAGCTTCCAGATAAATGCTACTCCCTCTGTCCCAT



gi|207382165|gb|FF353884.1|FF353884 BG02026A1A12.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
||||||||||| || |||| .
ATGAGGGAGGCTGGGTTTTAT

EST sequence (targeted fragment marked with yellow):
GCATTTTTTTTTTTTTTTTTTAGTACGAATGTAACACATCAATTTGATGTACCAAAATGATTACAATCCACTGACGAAATGAAGATGACACAATGGTGTGTCAATAAATACAACACAATCTACATACATACATACACACACATACAGTGATTTGCTGCAGCAGCGAGTCTAAGCCGCTTTGGTGGACTTATAACAAATTTAATCGCGAATTCGTGATTTTGGTCAGACAAGATAATCTTCTTCTTCTACTACTTCTTTCTTAATTTCTATCCCTCCAATCCAAAATTAGTGTAGTTCAAAACCGCGACACTTATTTTGGGTCGGAGGGAGTACTAAATTATATCCATCAGATGCTCTGGAGCCTGCTGTTCGTCCCGCTGAAGATCTGGTTAAGGATCACCGCCAGCCTCACGCCCCCCTGAGCGATCCTCTTCTCGACAACCGGCAGCGCCCGGAAGTAATAGTCGTCTCCTAAGGTGTCGCCTTGCTCGACGCCCTCGTACGCGTCGCAGGCCAGCAATGCGCTCTCCTTGGCGTACCTGCATTCGATCATTCTCAGCCGTCAGATCCAGCCTCGGGGTATACATGTTCAGTTTTGCGGTTGGATTGGCAGGCTCGTCGTCATCGTGATCTGG



gi|207473860|gb|FF341676.1|FF341676 BG02008A1A03.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
|||||||||||||| |||| .
ATGAGGGAGGCAGGGTTTTAT

EST sequence (targeted fragment marked with yellow):
CCTGTGACCGCTACCTCCTAGCGGTGAGGGTGCCCTGCCCCAAGGAGGCGTACTGCTGCGGGAGTTCCATGGTGTACTGCATGGTTGGCGACCACCGCCTGGTGTGCGGTGTGCCCGCACGCGCCGTGCCTCTGCCCTGAGCCCGGCTGCGGCTTCCTCGGCCCGTCGCCGGCGCTCCGTGGCCACCTTGCCGAGCGCCACCAGTGGCCCGTGACTGACATCGCCTACGGGTCCATGCTGGAGCTGGAGGTCCAGATGCAGCCGGCACAGCGGGGGCAGCTGTTCTTGTTGGCGGCGAGCAAGCGCGGCGTCATGGTGGTACAGATGTAAGGTGTGGGTGCACACTCCCGTGGACGCGGACACCGACCACATGGACGTCCTGATGCTGGACGCCAAGGTGAGGAGCTGCGTCGTCCCCGGCGTGGAGGCGGCCATGGACGCGGGCGGCAGGTACCTGCCAGTGTCGGCCGACGTGCCGCCGCAGGAATGAGGGATCGTCCTCCGTCTCCGCATCAACAAGCAGGTCAAGGCGAGGAGCCCCCGTTCCTGGGGTTGACGATTAGCTGGTCAGCTCCGGTTCTTTATCTAATCTACTATATACTCCCTCCGTCCTAAAATAAGTGTCTCGTCTCAAGTTTAAACTTGAGACACTTATTTTGGGACGGAGGGAGTAGTATATATCTACCATGGCTGACGTTGGTGATTTGATAATGAACTAGCAGTGATCAAAGGTTGGACCTTGGTTGGGCTTTTGATTGATTCTTTCCATGGCAATGGTTGCCCATGTATCGCGTACCAATGTGGTTGATCCCTACTTGGCCTGTCCATTTTACTTGTTTG



gi|207436392|gb|FF352288.1|FF352288 BG02016A1E01.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
||||||||||| | |||||.
ATGAGGGAGGCTAGATTTTTT

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTAGATCGGAGGGAGTAGTATAGTACTCCCTACTTCTGAAAGATCTTTTTTTATGCAAAGTGCTGCTGCACCCAAAAGAGGAGGTTTAAGAACAGATACATAGCATGTACTACTTGGCGGCCTAACAATACTATCTCACCACACAAGTGAAACTGTGCTAGTAACATTACTTTACATCTCTAGCTAGCTTAATAAACATCCAACAAAATGTTGACAACATGTCCTTTCCAGCTAGCCAACCAGGGTCACACATATATGATCTTTACTAATGATGGAACTATGTACAATGAGTTTGAGATTAACAGAGCGACTGGGTGCACAAATGTATATAGTGTGCATTACACCATGGAATATTACAAGATACTACAAATATGCTGCACAGGTGCTTCCAACAAAGCCATACATGCCCTTCATTCTTCATCACCTGTCGCACAGAAGCTTCTCACTGTGGTCGCACTCCATTTTGATCCAGTGTGTTGTAGGTGTAGTCCCCTGAGGAGTTCAGTCCATACTTCTGCCTCATTGATGAGCTCCATAGGTTCGGATGGACACCTCTGGGGTCAGCCGTGGTAGGGAGATTGGATGGAGCGCCTTGGGCAATAAGCAGCGGCCTCCTTATGACCACAAAATCTTCATCGCTGTCATAGTCGCTACTCGTTGGTGAAACCATGGCTCGTNNNACCATCGCCAATAAAAGCGAGAGTGCCTG



gi|207401073|gb|FF343397.1|FF343397 BG02014B2F11.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B

TACTCCCTCCGTCCGAAAAAG
||||||||||||||| |||
ATGAGGGAGGCAGGCCACTTC

EST sequence (targeted fragment marked with yellow):
ACGCATTTTTTTTTTTTTTTTTTGTAGAATATTATTGGTCTTTATTACCATGCAATGAGAGAGAAGTATTTTTTGCTACTTTAAAGTGCATTGGGAAGATAGATGTACACTCTTTTATGGACAAATTTTAAAGCCAAACGTACACTCTTCACCGGACGGAGGGAGTAGACCATAGTAATCACGGTTATAAAAACAGGAGAGGATCGTCTACTTCTTTCTCCTATAAATCTTCTTCAAAAAGATCTTCAAAATCTCCCGAATCGCATGGTCCGGTTCGGCGTCTATGGTTGAAACCAGGTGCTTGTAAACTCTTGACTCGTACTCCAAGAATATGTCCTGAAGATCAAGCTCCTTATAGACATTTTTCACTGCCGCAACACATTCCGGGCAAGACTTGCCATAGTTTTCGTATAGTATTTTCATCTCATTCTCATTAGCCAGTTCCATAGCCTGAACAATTAGCCAGGAGCACTTGTAGTCTTCTATGTCTGTTCCAACCTTGCCAATAACTTGAGGGTCCCCGAAGCAATCCAGGTAGTCATCCTGTATCTGAAAGTAGACTCCCATTTCAATGAGCATATTTTTCAGCTCGACGTAGTCGCTCAGTTTCGCGCCATTCAGGAGCAATGCGCAGGCAACCGGCAGGTAGAAGGAGTAGTAGGATGTCTTGTACTTGACAATGCGGCGGTACCCTTGGATTCTGTATCTGGCGAGATCCTTGGCGCCGGTGTGGGTGGTGATGNNNTCCAGCATCTGCCCCATGGCGGTCTGCAACCCAATCTCGT