| mature miRNA: TAGATACATCCGTATCTAGCC species: Pseudoroegneria spicata database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|207437402|gb|FF344654.1|FF344654 BG02005A2C07.r1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B TAGATACATCCGTATCTAGCC EST sequence (targeted fragment marked with yellow): GCATTTTTTCTTTTTTTTTTTAAGTGAAAGGTACTTCGCTTCTATAAATTGCTGATCCAAGTTGTTGGCACCTACTCAACATCATCTGTTTGAGCAATTTTAACACGGTCCCTCTTACCCTCTCTTTTCACACTACTTAATTAAATCAATGGCTCAGATCTTTATATACTCTTACCTCTCTTGTGCAAAGAGTAGGCAAGAGGGACCATGTTAAAAAACCTCATCTTGTTTATACTCCTTCCGTCCCAAATTACTTGTCCTAGATTTGTATAGATACGGTTGTATCTAACAATAAAATCTACTCCCTCCATCCCAAAATGTAAGACGTTTTTGTTCAAAAAACGTCTTACATTATGGACCAAAAACGTCTTACATTATGGGACGGATGGAGTAGTAATTTGGGACGGAGGTAATACATGACTTAAGAAACGATGGTCAAGTGCAGCATCCGATCACAAGTTGATCAAAAAGAGCTCAGAGCCAATTGAACTGGTAGCTCATACTGCAAACAGAAGCATCGGATCACAAATCATCAAAAAGAGCTCGAGCCAATTGAAGCAGGTAGCAGAGACTCCAAACAGAACTCAAACTTCATACTACAATTAGTTTTGGGAACTTAGAAAAAGCTTAAACCAATAGAAAAACTAGACTGAGACGAGCCACCAGCAGCATTAGCAGTCCACCGTATGTCCACTTGAAACAGATAGGGCAGCTCTCACTTCTAGTTTTAACCTT | |||||||||
gi|207415967|gb|FF359806.1|FF359806 BG02037A2H05.f1 BG02 - primary and normalized libraries Pseudoroegneria spicata cDNA clone B TAGATACATCCGTATCTAGCC EST sequence (targeted fragment marked with yellow): TTCTAAGTTTATGTGAAACAATGCAAAATGCACGCTGATATTCTGCGGTTTCTCAAAGAAAAAAGATTTATGTGGAGTGAAAATTCAGAGAAAGTTGACATAACCATGCAGTGATAAATAGAATGGTGTCACAAGACAAAACCCAATAGTTGTTGAGATGGCCAAGTCAATGTTCAGTGAGAGGACCTCAATGAGAACGGTACGCCCGATACCTCTTGGATACAAAATGTCAAGTCAATAGAACAACTTCTACTTTTTGACACACTAATTTTTTCTTTAGAAAAAATGGATCAACAGCGGTTTCTGAAGGATCTAACATGACTTCAGACCAAATTGGATCCGTTCTAAACTGACCATTTAACTGCATGTTATATGTCTATCCTGGCTCTTAACATGGCTTAAGTTTGATCTGAATTCTGAAGTCAGGCAACAGCAGTTCGAACCGTCATATATTCTATTACCTCCGTCCCAAATTACTTGTCTTAGATTTCTCTAGATACGGATGTACCTAACAATAAAACGTGTCTAGATACATCCGTATCTAGCCAAATCTAAGACAGCTAATTCGGGACTGAGGGAGTATGTCTGATCTGGCTGTTAACATGACTTCAGATTTTTGTCAGCTAAGTTTTTCTCNNNTCCGTCCATAAATAGCAGAACTTGAATGTACTGATACGTCTTCCAGGNNGTATTCTTGAGAAAAAAAATAACAAT | |||||||||