| mature miRNA: TGACAGAAGAGAGTGAGCACA species: Ricinus communis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|117361420|gb|EG692013.1|EG692013 RCSAO34TP Castor bean cDNA library from seeds (12-33 days after pollination), 1.4 kb Ricinus TGACAGAAGAGA-GTGAGCACA EST sequence (targeted fragment marked with yellow): AGACCTGTCGAGCTTGGGCACTGTGAACACTATGTTTGCAGCACTTTTTAGTAAACTTGGCGTGCCAATTAAGACCACTGTATCAGCAACTGTCTTAGAGGAGGCACTTAATGGCGTGGTCTCTATTCGTCCACTTCTGGTCGGCCAGCATATTTCTAGGAAGGTTGAAAAGCAATGTGCTCACTTCTATTCTGTCACAATAACAGAGGAGGAAGCAAGAGCTGGATTTTGTCTGTCGAGTGCAATCATCTGACAAGAGCAAGTTCAAGTTGTTGT | |||||||||
gi|111142726|gb|EE256373.1|EE256373 RFAAB82TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAB82, m TGACAGAAGAGAGTGAGCACA EST sequence (targeted fragment marked with yellow): AATTCGGCACGAGGCGGTAGTAAGTCTTTTATCAAATTGAGCCTTCACCGGATGTGAGAGGTATAGGCTTTCTACTAAAGAGGGAGAAAAATTTAGATTATTTCCCAATAAAATTGCCTCTTCCGAGATGATAGTTAGACCCAAGTATCTACCAATGCTCTCTCTCTTCTGTCAATTTAACATACAAAACTTAAATTATGTATCATCAGGTAGACCACTTTTCTG | |||||||||