| mature miRNA: TTGACAGAAGATAGAGAGCAC species: Ricinus communis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|111142726|gb|EE256373.1|EE256373 RFAAB82TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAB82, m TTGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): AATTCGGCACGAGGCGGTAGTAAGTCTTTTATCAAATTGAGCCTTCACCGGATGTGAGAGGTATAGGCTTTCTACTAAAGAGGGAGAAAAATTTAGATTATTTCCCAATAAAATTGCCTCTTCCGAGATGATAGTTAGACCCAAGTATCTACCAATGCTCTCTCTCTTCTGTCAATTTAACATACAAAACTTAAATTATGTATCATCAGGTAGACCACTTTTCTG | |||||||||
gi|117366054|gb|EG696647.1|EG696647 RCSA438TP Castor bean cDNA library from seeds (12-33 days after pollination), 1.4 kb Ricinus TTGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): GAGAAGAAAATCATAGAGAGTGAGTGAGCATCTGAAAATCGCGTCGATGGTCATTTCGTAGAAAGAAATAGTAGAGAGAGTGTGTTGTGTGATAGCATATGCTTGTGGGCGCGTGTGCGTCGACGTGTGAAATTTCATTAATGTTCAATCTCTGTATTTCTGCTTCTAGTGAAAATGGTTGATTAATCACTAATTACGACTACTGATTATAGATGGAGATTGGTAAAGGTTGCTGATATTATTAGCCTTAAGTCCCAGTATCAGATCATTATTATCAAAGAGATTTAAAGCAGAATGGACGGTGGTGAGGCGTCTGCTCTGTTACAGGCGCCGCCGCAGCCCTTGGAGTGGAGATTTGCGCAGGTGTTTGGTGAACGTACGGCTGGTGAAGAAGTTCAGGAAGTTGATATCATATCGGCTATTGAATTTGATAGAAGTGGCAACCACCTTGCCACTGGAGATCGTGGTGGGCGGGTGGTTTTATTTGAAAGAACTGACATGAAAGATCATGGTGGTAATCGGAGAGATCTAGAGAGGATGGATTTTTCAGTCAACAGGCATCCTGAGTTCAGGTACAGAACAGAGTTTCAGAGTCATGAACCAGAGTTTGATTATCTAAGGAGCTTGGAGATTGAGGAGAAAATTAACAAGATTAGATGGTGCCAATCAGCTAATGGTGCCCTGTTTCTTCTGTCGACGAATGACAAAACCATAAAATTTTGGAAGGTCCAAGAGAAGAAGTCAAGAAAGTGTGCAACATGAATGTTGACCCTGCAAAACT | |||||||||
gi|117368116|gb|EG698709.1|EG698709 RCTAF54TP Castor bean cDNA library from seeds (40-61 days after pollination), 1.6 kb Ricinus TTGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): GGTGTTAATCTCTCGTCAATTTTGTACATTAAATGCCCTTCCCACCTTCCAATTAATGACCCTTCCCCATTGTCAATTTGCCAGACTACTATTCTTCCCATTAACGCCCCTTCCTCTCCCATCCTCCATTCTCTTTCCTTTCAATTTAATACCCCCTCCCGAATCTCCGACCGTCCATTCACTCCGATCATTTTTAATCACCTCCCTCCACGTGTCCTCTTTCTCTTTCTCTCTCTCTCTTTTTCCTCACTATCTTCTGTTAAACCTCTCCGGTGATAACAGCGCCTCTGGATCGCCACACCTCAACCGACTCGATGAGAATGCCGCTACCGACGATCTCATAAACATTGGACTCGCCATTGACTTACTCCGCCGTGACGATCCTCCTCCTCCGCCGCCACCCGCCGGGAACCTCTCCGACAATGGAAAGAAACCCCCTCCTCCGCCTCTCCTTCTA | |||||||||