| mature miRNA: TGCAGTTGTTGCCTCAAGCTT species: Saccharum hybrid cultivar CoS 767 database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|268777235|gb|CN608762.1|CN608762 SUL01-033F-B02-013.b Sugarcane leaf whorl library Saccharum hybrid cultivar CoS 767 cDNA clo TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TGCTGCTAAGAAGGATGGGTCCTGTGACTGCAACTCTAGCTTTGAGTGTAATATCTGTCTTGACCCAGCTAAAGAGCCTGTGGTTACACCATGCGGTCACCTCTTCTGTTGGCCATGCTTGTACCAGTGGCTTCATGCACATTCACCCCACTCTGAGTGCCCTGTATGCAAGGGTGAGGTGCTAGAAGTGAATGTCACTCCGATATATGGAAGAGGCGGTGAAGAAGTGGATTCCACCAACCCTGACTTGCCACCCAGGCCACGAGCAAACAGAAGGGAGAGCCTGAGGCAACAGCTGCAAATGGCAGACACAAGAGGAAATGCATTGGTGAGGCAGTTGATACAAAACCATAGTATAGTTAGAGGCCTCCCAAGCCCAACAGGGATCGAAATGAATGTGGTTCCTGCAGGCCGGCAAAGGGCTAGGGCTCGGAGGCAGCAAAGGCAGGATAATA | |||||||||
gi|268792191|gb|DV639323.1|DV639323 SUR01-169-E10-A-082.b Sugarcane root library Saccharum hybrid cultivar CoS 767 cDNA clone SU TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CCAGGTGTCCAGGTCTTCGTCGGGCCCTTCTCCGGCACCGAGCACCCACCAGGAATAACCATGGAGGTCAGACCGATGGTAGCTCTGCGTGCTGCCCTAGTCGGTGGGATAGCAGCGTTTGCGAAGATCGGTGGGGCCATGAAAGCTGCAGGAGGTGTCAAGATTGGTGCAGCAGCTGCAGCCATGACAGCTGCGGCATCTGCTGCCATATCTGGAAAAGATGCAAAAGAAGACACTTCAAAGGCAGAAACAAAATGATATGACCCATGGATTGTTCGAGCAGTATTAAATTGCCTCTCCAGAGGTTCAGAAGAGAAATGATGCCATAGTCAATAAGTTACTGGAGCAATTTTTCATGCTCCACGTGTTTTTGTCTTGGGAATAAGAATGACAATCGAGTTCCCCAAAGTATGATTTTGTGCCAACAGTTT | |||||||||