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mature miRNA: TTGTGGCTTTCTTGCAAGTTG
species: Saccharum hybrid cultivar CoS 767
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|166793542|gb|DV734386.1|DV734386 SUS01-140-E09-A-069.b Sugarcane mature stem library Saccharum hybrid cultivar CoS 767 cDNA c 

TTGTGGCTTTCTTGCAAGTTG
|||||.||||||||||||| .
AACACTGAAAGAACGTTCATT

EST sequence (targeted fragment marked with yellow):
ATCAGCACCCCGCTTACAGGTCACAGCCCCTTGCTCATTGGATGAATGGATGGGGCGCGGACGGAAATCGCGAGAGGATGCCAAGCATTCATTTGTCAAGCAACATTTTGTTGCTGGCCGGTCTGCGTATTGCATATGGTGGCACCAAGCATGAGGCAGGAACTGCATTACTTGCAAGAAAGTCACAAAATCAATTGCAAGATCATACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGTTGCCTCAAGCTTGCTGCCTCCCTTTGCCAGAGCTATTGGTAAAACAGGAAATTAACAGGATTCAATCAGTTATTGCTGGGGTAGTCTACAGCAGATGCATGGGCTCTCTTTATTGAAAGCTAGCACGTCTTTGCTTCCGTGCACT


gi|166792496|gb|DV734310.1|DV734310 SUS01-136-A01-A-002.b Sugarcane mature stem library Saccharum hybrid cultivar CoS 767 cDNA c 

TTGTGGCTTTCTTGCAAGTTG
|||||.||||||||||||| .
AACACTGAAAGAACGTTCATT

EST sequence (targeted fragment marked with yellow):
ACATCAGCACCCGCTTACAGGTCACAGCCCCTTGCTCATTGGATGGATGTGGCGCGGACGGAAATAGCGAGAGGATGCCAAGCATTCATTTGTCAAGCAACATTTTGTTGCTGGCCGGTCTGCGTATTGCATATGGTGGCACCAAGCATGAGGCAGGAACTGCATTACTTGCAAGAAAGTCACAAAATAAATTGCAAGATCATACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGTTGCCTCAAGCTTGCTGCCTCCCTTTGCCAGAGCTATTGGTAAAACAGGAAGTACTGTCAGTTTCTGAGCTACAAAATATAAGTGTAGAAAAATAATTTAGAAATATTAACAGGATTCAATCAATTATTGCCGGGGTAGTCTACAGCAAATGCATGGGCTCTCTTTTATTGAAAGCTAGCACGTGTTTG


gi|268792463|gb|DV639595.1|DV639595 SUR01-162-F02-A-015.b Sugarcane root library Saccharum hybrid cultivar CoS 767 cDNA clone SU 

TTGTGGCTTTCTTGCAAGTTG
|||||| |||| || ||||||
AACACCAAAAGCACTTTCAAC

EST sequence (targeted fragment marked with yellow):
CTCTCCAGCAACTTTCACGAAAACCACAATGTCCCATTCGCATTCGCATGCCCCAGGAGACCACTCCCATTCTCACTCCCATGGACCTTCTCCTCAGCAACAGCAACAGCAGCAGCAGCAAATGATGATGCCAGCACCAGATCCAACTCTTCAGGCCATCATCGACGCTTCATACCAGCCAGTAGATCTTGCCGTTCTTCCCGACCTCCCAGCTGTCGTTTGCGGTCCTCACAAATCCGAAAAATGCGAGATCTGTAAACAGGACTATGTCGGTGTCAACAGACTGGCCAAGATATTACACCAAAATCCTTCGCTGACAGCACCTCCGCCTGCGAACGTGGTCAGCAAGAATTTAAGTGTAGCTGTTGGGAATACGAAGGAAGAGGGAAACCAATTCTACAAAAAGCAACAGC