| mature miRNA: TTTGTTGGTGGTCATTTAACC species: Saccharum hybrid cultivar SP70-1143 database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|35263000|gb|CA215078.1|CA215078 SCSBAD1128B06.g AD1 Saccharum hybrid cultivar SP70-1143 cDNA clone SCSBAD1128B06 5', mRNA seq TTTGTTGGTGGTCATTTAACC EST sequence (targeted fragment marked with yellow): ACCGCAACGCTTTCTTGCTCCTCGATCTCTCTAAGCTGCAGCTTCCTGTCTCCAGCTACCATTCCATGCATTTGTTCCTTGGTGATGCTGAGGGCGTGACCGCCTGAGGCTGGCTAGCTACCTAATGCAGCTCCGAACCTGTTTTGTTGGTGGTCATTTAACCATGCTTCCATCGATGGGTGCATGGTTTATGGCAGAGTGTGATGCCATGAACTCATCATGGTCATGCATGTGTGCATGGTTAGATGACCATCAGCAAACATGTTCACGAGGCATGCAAGCAAGAGATGTTCTCTCTAGCTACAGATCAGAAATCGATGACCACCACGCCATGGCTACTTCCAATGGAGGTTTTTGCGCTTCTCCGATCCCGGATGTCGTGCTTCTGCCTCCGTTCTTGATCCCGGATCTTCCGGTCTTCTTCTCAGCATTACTTTCCTTCAGAAACTGGGAGGGTTTCAATCTTTGTTTGTTTTGTGCGCATGTGGCGTGTGTTTCATGGAGATCCGTTCACTTATCTTGCTTGGTTGTTCTTCCTCTTCCTCTTCCTCTTCTTCGTCGTCATCTAGAGGATCACCAGCCGGAAATGGATGCGGTAATGGTGTCTTCATTGGGTTGACTTANGGAATATATCANGTCTCCTNCTAGGGCTTGGTCTCTCCCATCCN | |||||||||