| mature miRNA: TGCGAGACGAATCTTTTAAGC species: Saccharum officinarum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|36002121|gb|CA278392.1|CA278392 SCBFSD2038B08.b SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCBFSD2038B08 3', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): AATAACAACCAAGAGTGACAAAGGCACTCGGGTCAGAACCCTTGGTTTAAGGGAATTTATCCGCTACTATCGCCAGAAACCACGGCCTTCTGTTGCAACAGACCGTGCGCTTGCACTTTCACTGGCTTCCAGCTACAAGAGCATGGGTTTGGTGACTGTTCAGTCTAAGGAGCAGATGGTAAGGTTGAAAGTTCTCCGTGCAATGAACAGGACCGGGGTCGAGACGATGCGAAACAAGATCGGGATGAAGAGCAATGTGATCCGGAACCTCCCTAAGAACTGTCCGTATTAGACACTGCCTTTTCCTGCACCCAGTCTGGAGCTCCTCCAGACATTTATATGGTGTCTTATGGTTTCTTGTCTATCACTGACAATGTTGGCGCTTAAGATATTTGGAATAGGAGTATACCTTCCATACGAAGGGGTGTTTGGTTTGGTTTGTTAAAGTTTAACAAACACTGTAGCGTTTTCGTCTTATTTGATAAAAAGTTTCCAATCTTGGACTAATTAGGCTTAATAGATTCGTCTCGTAAATTACTCCT | |||||||||
gi|36006181|gb|CA279779.1|CA279779 SCCCLV1001D11.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCCCLV1001D11 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CGTTTGGATGCCAAAATTTTTGGCAAAACGCTACTGTAGCGTTTTCGTTGTTATTTGGCAAATATTGTCCAATCATGGTCTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTCGTCTAAACTGTATAATTAGTTTTATTTTTTATCTATATTTAATGCTTCATGCATGTGTCTAAAGATTCGATGTGACGGGGAATCTGAAAAATTTTGCAAATTTTCTGGGAACTAAACAGCCCCTCAACACAAAAGCATCATACACTCTCTCTCAGACGCGCATCGTCAACCATGGTTGTCGAGATGAAGGAGAACGGCGGCGTGGCGTTGGCGGCGGGCGAGAAGGCGCCGCAGCTGGGCGTGAAGCGCGGCGAGCCGACGCTGGTGCCGCCGGCGGAGGCGACGCCGACGGGCGAGCAGTACTACCTGTCCAACCTGGACCAGAACATCGCGGTGATCGTGCAGACTGTGTACTGCTACAAGCCCTCGCCGTCTCCCAGCGGCGGCGGCAAGGACGTCGACGT | |||||||||
gi|166795188|gb|DV735422.1|DV735422 SUS01-153-F06-A-057.b Sugarcane mature stem library Saccharum hybrid cultivar CoS 767 cDNA c TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): TGTCCAATCATGGTCTAATTAGGCTTAAAAGATTCGTCTCGTTCATTTCGTCTAAACTGTATAATTAGTTTTATTTTTTATCTATATTTAATGCTTCAGTCATGCGTCCAAAGATTCGATATGACGGGGAATGTTGAAAAATTTTGCAAAATTTTTTGCAACTAAATAGGGCCCATTCTCATTCCTCGTCACCGTACTCTGTAGTTGGTAGTCATGACTCATGACACATTGTCGTCCCACCGTCATTCACATGTCCACCCTCCGCCACGTTGAGCATATGTGTGGTTTAAGTTTATACCAACTCTGGCGTTTGCTATACTTCCTTCGTACTAAAAAATAAAGTCGTTCTAGGGGTAGAGGACTGTTTTCACATATGAAGTCGATCGTTTAGGCTCTTTTAATCTTCTTTTGGATGCGAATACC | |||||||||
gi|35978637|gb|CA270812.1|CA270812 SCRULB2063G11.g LB2 Saccharum hybrid cultivar SP80-3280 cDNA clone SCRULB2063G11 5', mRNA seq TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CTTCAGTACCCCTCCGAATTTCTCGTCACCCCGCGTGGCTCCATACAAGGTGGTTAGACCATATTTAATTCGCTATCTTTCACATCCAATGCACTGAGAATAAATTTACTGGTATCTGTTTAAATATTGTGTGAATCCACACCTGCTCCTTGTTTAGTTCCCGAGTCGGACGCCCCGATTCAACACTGCGTGTAACACTGCGACTGTGTTTTGATTTTTATTGCAAAAAAATTGTCTAAATATTGATTAATTAGACTCAAAATGTTCGTCTCGCAAAATATAACACAATTGTGCAATCAGTTTGTGATTTCATCTACATTTACTACTCCATGTATTCGCTGGTATTATGATGTGATGAATAATCTCCTTATTGTATAATAGACTTTAAGTGATGAATTGGATACTAAACAAGGCTATTGCCCTACTTTTGACCGATTAGCTGGCAGATGAGATTAGTACTAATGTTGCCTTTTTTTTTAGTTGCAGACTATCTTTCTCTTTGAACATTTATCCCATTTTTACTTAAAAATCCCCACTAAATTTTGCTTGTACTATCATAACTAATTTCTTCATCCATTGACTGGGCTACTACAACTCTAACTTTCTTCAAGAGCTTCCTGATCAATAATATCCTGGGATATTATCTTGTATAACCTTCTATACCT | |||||||||
gi|36027181|gb|CA285926.1|CA285926 SCEZSD1083D02.g SD1 Saccharum hybrid cultivar (mixed) cDNA clone SCEZSD1083D02 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CAGGGTTACTTTCACCCCAACAGTGGAGCACTGCAGTATGGCAACTATTATTGGCCTTTGCATACGTGTGCAACTTGTACGAAGTCTCCCTCCTCGTTACAAGGTGGACATAAGGGTTGCCCCTGGATCACACGCAACTGAAGCTGCTGTGAATAAGCAACTGAACGACAAAGAACGTGTTGCGGCTGCATTGGAAAACCCAAACCTACTGGACATGGTTGAAGAGTGCTTATCACCGACATTTGATTGAGGCCTCAGGCCTGAATATCTGGGCGCATGGTGTTTCATGTTCAGAAGCCACACTAGCTTATTGCCAATGGAGTTCACTCCTGTCTTTCGAGTACCGAAATGCGTTGGCTGTTAAAGGACGTGTGCATGATTTTTTCCCCCTCCGTCCCTTTGATGAGTTATTAGGGGGTGTTTGGTTTGNGGTGTTAAAGTTTAACAAACACCGTAGCACTTTCGTCTTATTTGACAAAAAGTTTCCAATATGGGACTAATTACGCTTAATAAATTCGTCTCGTAAATAACTCCTAATCTGTGCCGACATGCATGCAATTAGTCTACATTTAATACTCCATGCATTTGAGAGAACATTGATGTGATAGGAGTTATACTTTAACAAAAGCTAACCAAACAGGGCCCTTATTATAAAAAAAAAAAAAAGGGGCGGCGCTTTAAAGATTCATACTTCGTACCCGTGCATTCGACTTC | |||||||||
gi|36003294|gb|CA278783.1|CA278783 SCCCSD2093A07.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCCCSD2093A07 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): TTTGTAATGAACCCTACGTAGGATAAGGTGAGACCCTCGTACGTTGTACAGTAGGTAGTGTATTGGACAGTATATATACGAGTGATGACATGTGCTGCTATGACACTAGGTAAAAGGTAGGAGCTTCTGTAGCTGGGTTATTTCCCAGCACTGCATCATGTGGGAGATATAGATACCTGGCCCTTGTTTAGATGCCGAATCGGCACACCCGAATTGCTATTGGTAAAAATTGTCTAAACTTTGACTAATTAGGCTCAAAATGTTCGTCTCGCAAAGTATAACAAAACTGTGTAATTAGTTTTTAATTTC | |||||||||
gi|36075300|gb|CA300686.1|CA300686 SCSFLV1047E08.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCSFLV1047E08 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTTGTAATTAGACCATGATTGGACAATATTTACCAAATATCAACGAATAGTGCTACATAGCCATTATGGACTGTACTGCCCAATACTGCGCTAATACTGCTAAAACCATGCCGCTCGTCCATTTAGTAGTTATGTTATATCATTTATCTATATTTGATGCTCGATGCATGTGTCCAAAGATTCGTGACGGGGAATCTGAAAATTTTGCAAAATTTTCTGGGAACTAAAGCGGGCGTACGTCTGTTGCGTAAGCGCTGCGGGCACACAAGGAGGGATAGAGTCCGGAACGACGGTATTCGGGATAGGGTTGGGGCGGGCACCAATTGACGAGAAATTGATTCAACATCTGCGGAGATGGTTTGGACATGTACAACGAATGCCTCCTGAGGCGCCGGTGCGTAATGGGGTTCTAAAGCGGACTGATAATGCATAGAGCGGTAGAGGTCGACCTAAACTAATGTGGGACGAGTCCGTCAAAGAGACCTTAGAGAGATTTACTATGGACAAGAACGCTTGAAACTGGCAAACCGTGTTTGACCGGGACCTATATCTGGCTAGGCCTATTATGGTCCTTTGTGGGTCTACCGGTATACGCCCTTTTGGGTTCCTCTGTTCCCATTCCCGACTTACTTGGGA | |||||||||
gi|36068619|gb|CA298376.1|CA298376 SCRFFL8035F11.g FL8 Saccharum hybrid cultivar (mixed) cDNA clone SCRFFL8035F11 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): AACTGTAGCATTTTCATTGTTATTTGGCAATTAGTGTCCAATCATAGTCTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTCGTCTAAACTGTGTAATTAGTTTTATTTTTTTATCTATATTTAATGCTTCATGTGTTCAAAGATTCGATGTG | |||||||||
gi|36076728|gb|CA301169.1|CA301169 SCCCLV1C04E11.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCCCLV1C04E11 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTTGTAATTAGACCATGATTGGACAATATTTACCAAATATTAACGAAAAGTGCTACAGTGCCATTTTGGTAAATATTGTCCAATCATGGTCTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTTGTAATTAGTTTTATTTTTTATCTATATTTGATGCTTCATGCATGTGTCCAAAGATTCGTGACGGGGAATCTGAAAATTTTGCAAAATTTTCTGGGAACTAAAGCGGGCGTACGTCTGTTGCGTCGGTGTTGTGGGCACACAAGGAGGGATAGAGTCCGGAACGACGGTATTCGGGATAGGGTTGGGGTGGGCACCAATTGAGGAGAAATTGATTCAACATCTGTGGAGATGGTTTGGACATGTTCAACGAATGCCTCCTGAGGCGCCGGTGCGTAATGTGGTTCTAAAGCGGGCTGATAATGTTAAGAGCGGTAGAGGTCGACCTATACTAATTTGGGACGAGTCCGGTTAGAGAGACCTTAAAGAGATTTACCTTGGACAGGAGCGCTTGTAGACTGGCANAACGTGCTTTGAACCGCGACCTCTTTCTGCCTCGGGGCTTTTA | |||||||||
gi|36036929|gb|CA288028.1|CA288028 SCEPSD2069A05.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCEPSD2069A05 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): TCGTGCCCGATCCGGTCGAGCCCGGCAAGCCCGCCACTTTCAAGATCTCCGCTACTACTGATAAAACCATTGAGAAGGGGAAGCTGCAAATAGATGTTAAATATTTCTTCTTCTACGTACACTCGGAAACTCGCGACATCTGTGGAGAGACTTCCTGTCCAGCAACTGGTGACTTCGTGCTGTCTCATGAGCAGACATTACCAGGATTCACTCCACCGGGCTCTTACACGATCTACATGAAGATACTTGGGGACGAAAACGAGGAACTGAGCTGCATCTCGTTCGGGTTCAGTATCGGGTTCGTCGCCTCCAGCTGAATGCGTCTGAGCTGAGCACCAGAAGTAGCCCATGGATGATGTAATTATGTAAACCACTCTGTATCGTATATCGTATAACTCCCAGTGTCGAGGTCCATGTATGCTTTGTGGGTGTTGCAGAACTGTCTTGTGTTCAACTAGGGGGGTGTTTGGTTTGAGAGTTAAAGTTTAACAAACATTATAGCACTTTCATCTTATTTGTCAAAAAGTTTCCAATCTTGGACTAATTAGGCTTAATAGATTCGTCTCGTAAATTATTCCT | |||||||||
gi|36041916|gb|CA289572.1|CA289572 SCAGFL8006F02.g FL8 Saccharum hybrid cultivar (mixed) cDNA clone SCAGFL8006F02 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): GGGTCGACCCACGCGTCCGTGCATTGCTTCAAGGAACACTGGAAGTTGATGGTGTGCCCTTCAAGGAGATACCAAGAGAAGCATGTCCGGCGGTGAAAAGAGGGTCCGTTGCCTGGGTAGGGTCAGGGCCAGAGTTCCTGATCAGCTTAGCAGACCACGAGGAGTGGAGGGACGCCTACACCGTGTTCGGGAATGTGCTTCCCAAGGACATGGCGATCGCAGAGGAGATGGCACTGCTGCCGACAAGCACAGACGTGTGGAGCAATGTTACGGTGAAGGTGCTGAAAGATCCTATCTACTTCAAGGTGAAGAGAAGCAGCAATGCTAGCGCTGTCTAGGTGATGGGCATTTATTTTGGATGAAAGACTGGCAACACCGCCAAAAGTTAAAGCGGATGATGGCTTCACTGTGGCCTTGTTTTAGTTCCTCAATTGGGGGATGGCCAAATCACTAGAGCACACTATAATTTTTTTATTTTTATTTGGTAATAATTGTCGAAGGGTAGGCCTGATGCAGTTGGTGAGTGCTAGCTCGCCGAGTCACCAGGTCCTGTGTTCGAAGCCGTCTCTCTGCAGAATTTCTGCGGNGGCAAGACTNTGCTTCGGTTATTCCTTTCCCCAGATCCCACTCGTGTGGGAGCCTCTGGCACTGGGTCTGCCCTTTTTTGGTAATAANTTGTCGAATATTTGATAATTAGGCTCAAAATATTCGTCTCGCAA | |||||||||
gi|268803969|gb|DV548986.1|DV548986 SUM01-073-B06-A-045.g Sugarcane mature leaf tissue library Saccharum hybrid cultivar CoS 767 TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): ATTAGCGAAACAAATCTATTAAGCCTAATTAATCCATCATTAGCACATGTTTACTGTGGCAACGTATTGGCAAATCATGGACTAATTTGGTTTAATAGATTCGTCTCACGAAATAGTCTCAAACTGTACAATTAGTCTATATTTAATACTCTAAATTAGTGTCAAACATCCGATGTGACAGGTTGAAAAACTCATAATGTCATAGGTCCAACAACTTGAATTAATTGATTATAAGAGTTTTACACGAGGCTAGGTATATTGATGGAGCTTAAGAGTAAAGCAATCAAAGATGATTATGTGACTAATTCTGATTTACATGCTACTACCGATCCTATAAAGCATTATCGATTGATGTTGTTGCTCCTCTGGAAGATCAGAAGACAATAAATATTATTGGTCTTAGGGTTGATGCCTTACCTTATGTTTGTCATGGACACTCTACTTTCAAGTTAGTGTGGGTATGATTTTCTTCCATCATATGGTGTCTTTGGAAA | |||||||||
gi|166789861|gb|DV733996.1|DV733996 SUS01-146-B02-A-014.b Sugarcane mature stem library Saccharum hybrid cultivar CoS 767 cDNA c TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): ATTCATCTCGTGATTTTGAACTAAACTGTGTAATTAGATATTTTTTTACCTACATTTAATACTCCATGCAAGCGGCTAAAAATTGATGTGATGGAGAGAGTGAAAAAACTTGGAATTTTGAGGTGGTCTAAACATGGGCTAACTCATATTTCTTTAGCCGGTTGTCACAATCCCTCATCTACCTCTGGTTAAAAGAGTTGTATTTTTCTACCTTGAATGGAGTAATTTGTTAAAGGCTGTGTTTAGATCCGAATTTTGGAGTGCCAAAATACACTGTAGCATTTTGTTTGTATTTGGTAAAAATTGTCCAAATATTGACTAATTAGGCTCAAAACGTTCGTTTCGCAAAGTACAACCAAACTGTGCAATCAGTTTTTGATTTTATCCACATTTAGTACTCCATA | |||||||||
gi|36009125|gb|CA280799.1|CA280799 SCVPFL4C11D09.g FL4 Saccharum hybrid cultivar (mixed) cDNA clone SCVPFL4C11D09 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CGACCGATTGATGCACATTGAGCGCAAGGCCTAGCTAGCTATAGTGGTCGATCGTACGTAGTAAGTACCCGCTGGGGCTACGCAAGCTGAAGCATACTCCCTCCGTCACATAATACCCGTCGTTTTTTGTCGTGCCACAAGTTTAACTCGATTTGTAGAAAATACGTGCAATATTTGTATCTCCAAATAAATTTATTAAAAAACTAGATTCAAAGATCTTTCCAATTATATTTTAAATATTAATATTTTTTAATATATATTTTGTCAAAGTTGTTTCTTGGAAAACAAAAACGATTGATATTTTGGTACGGAGGGAGTACGCATGGTTCCAATAGAGACGGTAGACACGGTACACATCGGAACATGCATGGTCATACCGTGTTATATACTACTGTTTAATTATTATCAGTTCATTTGTTTCTGGCATGGCTTAGATGCCCGATTCGGGGCACTGAATAGCTACAGTGCGCAACAAATGCGTACTATAGTAATTTTGTTTTTATATGGTAAAAATTGTCTAAATTTTGACTAATTAGGCTCGAAATGTTCGTCTCGCAAAGTATAACAAAAATGTGCAATTAGTTTTTGATTTCATCTACATTTAGTACTGCATACATATGCCGATATTTCGATGTGACGGAGAATCTTCTTTTTGCATAGTAAAATTTAGGGATGAATTTAGGGGCTTG | |||||||||
gi|268795578|gb|DV641303.1|DV641303 SUR01-188-F03-A-027.b Sugarcane root library Saccharum hybrid cultivar CoS 767 cDNA clone SU TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): ATAAAAAAATATAGAGAGTAATTGATAAGTTCACCATAACGGAGGCGGGGACACTGTAGCATTTCGTTTGTATTTGATAATAATTGTCCAATCGTTGACTAATTAGGCTCAAAACGTTCGTCTCGTAAAGTACAATCAAAATGTACAATTAGTTTTAAATTTTATCCATATTTAGTACTTCATGCATGTATCGCAAATTTGATGTGACGGGAAATCTTTTTTTGTATAGTGCAATTTTCAATGGAATTAAACAATGCCTGTATTTTGTTACAAGCGAATCTTTCTGTCTCGCGGTAGCACTCACCATGGTTTTAATGCTCTCTCCAGGGATGTACTACTACTTAACTTTATAGGTTCATATCCAAGTGTTGAGATAGTGATGGTGTTTTGTTACGGCCGCACAATCAACCACTGTTTCTGCACTTCTACAGTT | |||||||||
gi|36056979|gb|CA294457.1|CA294457 SCSGLV1012B04.b LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCSGLV1012B04 3', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): ATGGGTCGCTAAGAAGACGAGAAGGCCAGCAGAAATATATTTGAAGCCAGAAATAAGATTATANCGGATACAATTACCATCGACTTGCATGGCCAACATGTCCAACAAGCTATGAACCTTCTCAAACTTAACATGATGATTTGTATTTGCATGCCATCTGTCTTACTGAGGGTAATTACTGGTTGTGGTTCAGAAGGTACAGGGAAGGGAAAAATAAAGCGCTCGGTTATAGAGCTTGCAGAGAAGGAACATATTGAGTGGCGCGAAGAGAACTCTGGAACCGTAGCTCTTCGACTTGGTGGGCCAAGAGAGTATCGATTCCTTGAGCGTGAAAGCGATTCTGACTAAGCGGGGGGAAGCCTTCGTGAGGATACTTTAACATAGATTAACTTGTGATTTAATCTATGTATCCCCGTATTTATCTGTATCTATGTGTTATAATTATGGATGCCTAGGCTGTGACGTAGGCTGATGTAGGCTGTAGTAGTTCTGACACAGAAGTTCGGTATTGGGTGTGTTTAGTTCCGCGAAGAGGTGTAAAAAAAAGGACTGTAGCACGTTTTGGCTTTATTTGGTAAATAGTGTCCAACCGTTGACTAATTAGGTTCAAAACGTTTGTCTCGCAAAGTACAACCAAGCTGTACAATT | |||||||||
gi|36014199|gb|CA282419.1|CA282419 SCCCLV1003F04.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCCCLV1003F04 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CTTGTTTTGTAGATGTTTCTCTTTGTCTATAACCTAAAATGTGTGTCAGCATATAGGTTGGCATGAATAAAGGTTCCACACATTTGTAATTAATGACTCACTATTACACTTTCCATGTGTTGATATATTTTTTATTTAGAACTTTCTGCAATTACTGAAGTTGCAAAAATTCGAACAGAAGGGGTGCACAGTGCCGAGGAGGTCGAAATGACATCGATTCAGGCCTCGTTCAGTTCTAGGGTGTAAACTTTTAGGGTGTCATGTCGGGTGTCACATGGGGGTGTCGTATAAGGTGTTCGGATACTAATAAAAAAAATAAATTACAGAATCCGTCAGTAAACCGTGAGACAAATTTATTAAGCCTAATTAATCCGTCATTAGCACATGTGTTAATGTAGCACTTTATTGTTAAATCATGAACTAATTAGGCTTAAAAGATTCGTCTCGCAAAGTAGTCACAATCTGTGCAATTAGTTATTTTTTAATCTATATTTAATATTCTATGTATATGTCCAAACATTTGATGAGATAGGGCGTAAACTTTTAGGGAGGAACTAAACAAGGGCTCAGTTGAATATTGGTCATAGCCATTGTACCT | |||||||||
gi|36026340|gb|CA285641.1|CA285641 SCEZSD1079G02.g SD1 Saccharum hybrid cultivar (mixed) cDNA clone SCEZSD1079G02 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CATACATGTGCCGCAAGATTTGATGTGACAGATACTGTAGCACTTTTTGGGTTCACTTTTCGTGAACTAAGGGCCGGTTTAGTTCCGAAAAATTTGGCAAAATAGCACTGTAGCGTTTTTCGTTGTTATTTGACAAATATTATCCAATCATGGTCTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTCATCTAAACTGTGTAATTAGTTTTATTTTTTATCTATATTTAATGCTTCATGCATGTGTCCAAAGATTCGATGTGACGGAGAATCTGAAAAATTTTACAAAATTTTCTGGGAACTAAACAGGTCCTAAACAGGCTCGATGTCTCGCTCCATCGACGAGTAGGACACAAGCTTCAAGCTACTCCGTAAATATCGCTAGCCCAGTCCAAACAGTATGTTTAAGATACTGTTCCACTACTTCCAAAGAGGAATCTAGCAACTCATCAACAAACTATATACAGTACTCCTACATTTGGATTTTTGGAGAAGATGTCCAAAGCATTGCGCACAGAAAAATATATACTCCTACCGCAGCAGCAGAATTAAGGGGGTGTTATGAAAAAATTTTAGAATTTAGCTTCTATTACACTTTTATTTATATTTGGGAATTAATGTCCAATCATAAACTAATTTGGGTCAACCCAAAATTTGACCTATGAATTTTTACCCTAACCGGTTAAATAAGTATTTTTTTG | |||||||||
gi|36046895|gb|CA291055.1|CA291055 SCUTSD2026C09.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCUTSD2026C09 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): GATACCGCCAGGTTTTTCGGCTGATAACAGGGTGTCCTTGGCATCTGATGCTTGAGGTGACTGGTGTGCGGTGCTACTAAGACTGTGTTTAGTTGCACATGTAAAATTTTTTGAAGTACAGTAACATTTTCATTTGTATTTGGTAATTAGTGTCCAATCATGGACTAATTAGGTTTGAAAGATTTGTCTCGTGATTTACAACCAAACTGTATAATTAGTTATTTTTTACCTATATTTAATGCTTCATACATACGCCAAAGATTCGATGTAAAGAGGAATCTTGTAAATTTTTTTTAAAGTCTGAAGGAACT | |||||||||
gi|36051138|gb|CA292478.1|CA292478 SCRLFL8024G01.g FL8 Saccharum hybrid cultivar (mixed) cDNA clone SCRLFL8024G01 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): CCCGAGGGCCAGGTGCTCGACATCCTGGAGGACACCAAGGGAGAGGTGGTGAGAGCCGTCAGCGAAGTGGAGGAGAAGGACGGGAAGCTCTGGATAGGGTCCGTCTTGATGCCGTTCATCGCTGTCTTTGACCTGGCGAAGGCGTCTTAGGCGGTGTTTGGTCTGAGGAGTTAAAGTTTAACTCGCACTGTAGCACTTTCGTCTTATTTGAGAAAAAGTTTCCAATCATAGAGTAACTAGGCTTAATAGATTTGTCTCGTGAAAAACCCCTAAACTGTGTTATCATGCATGCAATTAGTTTACACTTAGTACTCTATGCATGTACCGCAACATTCGATGTGATGAGAGTTAAAATTTAACTCCCC | |||||||||
gi|35984887|gb|CA272772.1|CA272772 SCEQRT3C01E02.g RT3 Saccharum hybrid cultivar SP80-3280 cDNA clone SCEQRT3C01E02 5', mRNA seq TGCGAGACGAATCTT-TTAAGC EST sequence (targeted fragment marked with yellow): AATTATATTGCTAACTTAATTTCATTTGTTAATTACTTTGCTTTGTTTTGTTTTTGCAGGTGAACATGCTGATTCTATTTTCATTGTCGGGTGGCAAGAAACTAACCAAGGAGTCTCTTCTCATTCCTTGCTGTGGAGGACTGTTTAGCTGCAGCTGAGCAACATGCTTTCCAGGTCCATGTCAGCATGCGGGAAGTTAGTTTCTTTTGCTGTCATGCCACAACCTCTGTTACTGGAAATAATAAGCCAAATCAAGGCAGTCTCTTTGCTCATGTAAAACACATGGATGTCCTTGCTCTATAGGCTGAGTGAGGAGAGAACATAAATTGTTGGAAGAGAAGTTTGATGCTAACACTTTACGAGAAGGACCGAGCCAGAGTGCCGGACACAATAACATCAAACTGAGATACTGATGCTGCAGTTTACCAACTTTTTCGATAGGGCAGATTGAAGAGCAGCAAGATCAGCTTCCATCTGCAGTTTGAAGAAATCTTTTTAAGGTCTCGGACTAAAGGAGAATCCTTTCGGCAATCTTGCCTTCACCCCAAGCATACTGCGTACCATGTAATGATTGTAGTACTTGACAACTGTTACCAAAGTACTAGGGGGTGTTTGGTTTGAGGTGTTAAAGTTTAATAAACGCTGTAGCACTTTCGTCTTATTTGACAAAAAGTTTTCAATCTTGGACTAATTANGCTTAATAAGATTCGTCTCGTAAAAAAA | |||||||||
gi|268805623|gb|CN607923.1|CN607923 SUL01-020F-D01-010.b Sugarcane leaf whorl library Saccharum hybrid cultivar CoS 767 cDNA clo TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): TTGTTATTTGGTAATTATTGTCCGATCATGGCCTAACTAGGCTTAAAAGATTCGTCTCGTCCATTTCGTCTAAACTGTGTAATTAGTTTTATTTTTTATCTATATTTAATACTTCATGCATGTGTCCAAATATTCGATGTGACGGGAATCTGAAATATTTTGGGAAATATTTTGGGAACTAAACGAGGGCCTAATTCCAAAGCTTCAACATGCAAATATAGTTAAGCTTCTAGGATATTGCACCCAAAGGAGAGAAAGGATCTTGGTGCTCGAGTATATTCCAAATGGAAGCTTGGATTCCTTCATACATGGCATGTTTCAACTAGTTTTACATACTGAAGTTTGAGAACAAATTATAAAATTCCCATGCATGTATGTGCATGATTTATTTACAGGTGCGAGAGCAGTGGAGGCACTGG | |||||||||
gi|239916420|gb|GE325063.1|GE325063 ScPhySHF 250 Saccharum officinarum CoC671 ESTs from the Forward SSH library Saccharum hybrid TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): AATGACGCTTTGGATCAATATGCAGAGAGGCGGCAGACCTCCAAAGCTGTCGTGAAGAGCAGGATTCTCCAGGGCTGAGGCTGTGTTTAGTTGCACCTGTAAAATTTTTGAAAGCACAGTAACACTTTCGTTTGTATTTGACAATTAGTGTCCAATCATGGGCTAATTAGGTTCGAAAGATTCGTCTCGTGATTTACAACCAAACTGTGTAGTTAGTTTTTTTTACCTATATTTAATGCTCCATGTATGCGTCCAAAGATTCGATGTGACGGAGAATCTTGTAAAATTTTTGGAAGTTTGAAGGAACTAAACAGGGCCTGTGTTAAATTCTTGGAGGGGTAGAAACGCAGGCAAAACGTTGTTGTTGCTGGCATGCATATGACAAGCACGAACTCGGCTCGATTGGCTGAGTTCCATGCCATTCAAGCCGACACCGATGCGATTGATGAGCCGTCTCAAACGCAATTGGAGATTTACTACAAGACTGT | |||||||||
gi|36057637|gb|CA294666.1|CA294666 SCSGLV1013D11.b LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCSGLV1013D11 3', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): TCATAGTTCTGACTTATGTCATGAGAGTCAATTTGTGTATTCTCTGTACTAAGTGACGTGTTTTNTAGATCAATATTATTCCGGATCTGAATATNANTGGCTGTCCAGGGTGATTGACTATTACTCCAAGAAAGGCTTAGGGTGTGTTTAGTTCCGCGAAAAGGTGTTAAAAAAGTTCTGTAGCACGTTTTGGCTTTATNTGGTTAATAGTGTCCAATCGTTGACTAATTAGGTTCAAAACGTTCGTCTCGCAAAGTACAACCCAGCTGTACAATTAGTTTTTGATTTCATCTACATTTAGTACTCCATGCATGTATCGCAAGTTTGATGTGACGGGGAATCTTTTGTTTGCACAGTGTTTTTTTTGAGGAACTAAACACAGCCTTAGTGGTGAACCTGCCTGCAGAGAAACCACCAAAGGAAGTGACTGCTGAGGTGCAGAAAGCACTCTCGCGATGAAGTGTCCACTCTTCAGGCTAAGCATGACATCTACCAAAATCCCTTTGTCTCGGTTTCTTCCAAATTTATACTTAGGCCAACATCATGTTTTTATTTTCTGTATCCCTTTTTGCGAGCACCGTTTTATCCCAGCTTTGAACTGTCTGGATAAATATCTGTTTCGAATGAGGGAAGTTTTCAGTAAC | |||||||||
gi|36077261|gb|CA301352.1|CA301352 SCCCSD2C04B02.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCCCSD2C04B02 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): AATAACAAACAAGAGTGACAAAGGCACTCGGGTCAGAACCCTTGGTTCTAGGGAATTTATCCGCTACTATCGCCAGAAACCACGGCCTTCTGTTGCAACAGACCGTGCGCTTGCACTTTCACTGGCTTCCAGCTACAAGAGCATGGGTTTGGTGACTGTTCAGTCTAAGGAGCAGATGGTAAGGTTGAAAGTTCTCCGTGCAATGAACAGGACCGGGGTCGAGACGATGCGAAACAAGATCGGGATGAAGAGCAATGTGATCCGGAACCTCCCTAAGAACTGTCCGTATTAGACACTGCCTTTTCCTGCACCCAGTCTGGAGCTCCTCCAGACATTTATATGGTGTCTTATGGTTTCTTGTCTATCACTGACAATGTTGGCGCTTAAGATATTTGGAATAGGAGTATACCTTCCATACGAAGGGGTGTTTGGTTTGGTTTGTTAAAGTTTAACAAACACTGTAGCGTTTTCGTCTTATTTGATAAAAAGTTTCCAATCTTGGACTAATTAGGCTTAATAGATTCGTCTCGTAAATTACTCCT | |||||||||
gi|36057245|gb|CA294544.1|CA294544 SCSGLV1013D11.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCSGLV1013D11 5', mRNA seque TGCGAGACGAATCTTTTAAGC EST sequence (targeted fragment marked with yellow): ATATCTTACGACAGTACGGTGGGAATCCCGGGATCGACCCACGCGTACGAAATTTGGCTTATCTCACCTTTCTTCATTGATGATTTCCCTCCATTTATATATTTATATCAGTGTTGCATGAAATTCAACAATTTGGTGGTCCCTGTGGGACGTGCATTTTTAATGTCCTTTTATAGTTTTGATGCTCCATTCTTATATGTTTTTTTGTGAACGCAAAGTCTTATGGGTTCTCCACTTTTTATTCATAGTTCTGACTTATGTCATGAGAGTCAATTTGTGTATTCTCTGTACTTAGTGACGTGTTTTTTAGATCAATATTATTCCGGATCTGAATATAATTGGCTTGTCCAGGTGATTGACTATTACTCCAAGAAAGGCTTAGGGTGTGTATAGTTCCGCGAAAAGGTGTAAAAAAAGTACTGTAGCACGTATTGGCTTTATTTGGTAAATAGTGTCCAATCGTTGACTAATTAGGTTCAAAACGTTCGTCTCGCANAGTACAACCAAGCTGTACAATTAGTTTTTGATTTCATCTACATTTAGTACTCCATGCATGTATCGCAAGTTTGATGTGACGGGGAATCTTTTGTTTGCACAGTGTTTTTTTTGAGGAACTAAACACAGCCTTAGTGGTGAACCTGCCTGCCGAGAAACCACCAAAGGAAGTGACTGCTGANGTGCANAAAGCACTCTC | |||||||||