| mature miRNA: TTCGAGACGAATCTTTTGAGT species: Saccharum officinarum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|239916420|gb|GE325063.1|GE325063 ScPhySHF 250 Saccharum officinarum CoC671 ESTs from the Forward SSH library Saccharum hybrid TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): AATGACGCTTTGGATCAATATGCAGAGAGGCGGCAGACCTCCAAAGCTGTCGTGAAGAGCAGGATTCTCCAGGGCTGAGGCTGTGTTTAGTTGCACCTGTAAAATTTTTGAAAGCACAGTAACACTTTCGTTTGTATTTGACAATTAGTGTCCAATCATGGGCTAATTAGGTTCGAAAGATTCGTCTCGTGATTTACAACCAAACTGTGTAGTTAGTTTTTTTTACCTATATTTAATGCTCCATGTATGCGTCCAAAGATTCGATGTGACGGAGAATCTTGTAAAATTTTTGGAAGTTTGAAGGAACTAAACAGGGCCTGTGTTAAATTCTTGGAGGGGTAGAAACGCAGGCAAAACGTTGTTGTTGCTGGCATGCATATGACAAGCACGAACTCGGCTCGATTGGCTGAGTTCCATGCCATTCAAGCCGACACCGATGCGATTGATGAGCCGTCTCAAACGCAATTGGAGATTTACTACAAGACTGT | |||||||||
gi|36072688|gb|CA299773.1|CA299773 SCMCLV1030A01.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCMCLV1030A01 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CTATGATCGTGCACTGACTAACTTTACTTCTAATAGCGGGGCCAATGTAGACTTTGGTGACGCTTGCATGTGCTGCTCAGACAGGTGCGGAATCAGCACAGTGAGCTGCATGGGCATCCCTCGCTGCTGGAAATATTGCGCAAGTGCGCATTGCAGATCTGAAGAATTCGAAGGGTGTGTTCACTTCACTAAAAGTAACTGAAAAGTTACTGTAGCACTTTTCGTTGTTATTTGGTAAAATTAGTCCAACTATGGATTAATGAGACTCAAAAGATTCGTCACGAACTCTACAGACGAACTATGCAATTAGTTATCTTTTTTACCTACGTTTAATGCTTCATGCATGCGTCGAAAGATTTGATGTGATGTGTGTAAGACGAAATATTTTGGGTTGGGAGGGCGAAGAGACCTCTGACCACTGGTGTGTTACTTGTGCACCCATTGTGTCCTGAAGGATACCCACTGTGGATGTGCTGGGACACGTACACCAGCTTGAGTTCACCAGAGCTCGCTCTCCACTGATACACAGGGATAAGAAGCCGTGCTTGTGCTGACCATGTCAGCATCTTTGGAGGGCGATCCATGTTTAT | |||||||||
gi|36054409|gb|CA293590.1|CA293590 SCSGLV1005G10.b LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCSGLV1005G10 3', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CCCACTTGAGATTATTCAGAGGANAAGGAGACGATCATCAGAAGATACAGTTTGTCCACAGCCCCAGAGGATGAGCCTACCCATGGCNNACAGACTATTNTGTATNTCCCAGATCCTATAGAGGTGAAGCAGGACCATATTATAGAAGGTTCTGTNACAGTGTCCCAGAGCGAGGAGAACCCACGTTTTCTGAATATTCATCTAGAGTGCACCACAGGAGGACAGGCATTGGTAAAGGACTGCGCCATGCGATGAACTGGTGTTTTTGTACTTTTAGTGGCTGGAGTCCCCTGCCAAAGATCGTACAACTTGCAAAAGGGCCTCTTTCTGCTTCCGTGAACTCAACTCTGGCATTGGCAGTCAGGAGCTGAAGACAGGATTTCAGATTTTTTTGATGGAAGCGGATTGTACTATTAATGCAATTTTTTCATCTAATATGAAGGCAAGATTTCAGTAATTGTACTTCGTCTTATTCTATAGAGTATAGACTGGTAGTTGATTTAGGCTGTGTTCAGATCCGGAATTTTTTGGGGGAAAATTCCTGTAGCACTTTCGTTGTTATTTGACAAAATTTGTCCAACCATGGACTAACTAGGCTCAAAAGATTCGCCTCGACATTTACAGACAAACTATGCAATTAGTTATTTTTTTATCTATATTTAATGCTC | |||||||||
gi|166794769|gb|DV733604.1|DV733604 SUS01-115-A02-A-006.b Sugarcane mature stem library Saccharum hybrid cultivar CoS 767 cDNA c TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): ATTCTTGGACAAGATCAACTCCAGTTTTATGCATGTACTAGTACTAGTTACGTCAGAGATGCATCAATCGTGCAATGTCTACAGTACTAGTAATAAATCGCAGCACACACAACAAGGAACATTATTCGTGGTACTCTGCACAGTCTTGTTCCTAGGTCATATTTAGTTTGCAAAAAATTTTTTAAAAAAACATTGTAGCACTTTTCGTTTTATTTGATAAACTTTGTCCAATCATGGATTAACTAGGCTCAAAAGATTTGTCTCGACATTTAAAGATAAACTGTACAATTAGTTATTTTTTTATCTACATTTAGTGCTTCATACATATGCCGTCATATGCGATGTGACGAGGAATCTTGAAAACTTTTTGTATTTTGAAGTGGTCTAAACATGGCCCTAGTGAGTACGAATCATAACTGCAGAGGAACTGAGCATGACAATG | |||||||||
gi|36014199|gb|CA282419.1|CA282419 SCCCLV1003F04.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCCCLV1003F04 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CTTGTTTTGTAGATGTTTCTCTTTGTCTATAACCTAAAATGTGTGTCAGCATATAGGTTGGCATGAATAAAGGTTCCACACATTTGTAATTAATGACTCACTATTACACTTTCCATGTGTTGATATATTTTTTATTTAGAACTTTCTGCAATTACTGAAGTTGCAAAAATTCGAACAGAAGGGGTGCACAGTGCCGAGGAGGTCGAAATGACATCGATTCAGGCCTCGTTCAGTTCTAGGGTGTAAACTTTTAGGGTGTCATGTCGGGTGTCACATGGGGGTGTCGTATAAGGTGTTCGGATACTAATAAAAAAAATAAATTACAGAATCCGTCAGTAAACCGTGAGACAAATTTATTAAGCCTAATTAATCCGTCATTAGCACATGTGTTAATGTAGCACTTTATTGTTAAATCATGAACTAATTAGGCTTAAAAGATTCGTCTCGCAAAGTAGTCACAATCTGTGCAATTAGTTATTTTTTAATCTATATTTAATATTCTATGTATATGTCCAAACATTTGATGAGATAGGGCGTAAACTTTTAGGGAGGAACTAAACAAGGGCTCAGTTGAATATTGGTCATAGCCATTGTACCT | |||||||||
gi|36057637|gb|CA294666.1|CA294666 SCSGLV1013D11.b LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCSGLV1013D11 3', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): TCATAGTTCTGACTTATGTCATGAGAGTCAATTTGTGTATTCTCTGTACTAAGTGACGTGTTTTNTAGATCAATATTATTCCGGATCTGAATATNANTGGCTGTCCAGGGTGATTGACTATTACTCCAAGAAAGGCTTAGGGTGTGTTTAGTTCCGCGAAAAGGTGTTAAAAAAGTTCTGTAGCACGTTTTGGCTTTATNTGGTTAATAGTGTCCAATCGTTGACTAATTAGGTTCAAAACGTTCGTCTCGCAAAGTACAACCCAGCTGTACAATTAGTTTTTGATTTCATCTACATTTAGTACTCCATGCATGTATCGCAAGTTTGATGTGACGGGGAATCTTTTGTTTGCACAGTGTTTTTTTTGAGGAACTAAACACAGCCTTAGTGGTGAACCTGCCTGCAGAGAAACCACCAAAGGAAGTGACTGCTGAGGTGCAGAAAGCACTCTCGCGATGAAGTGTCCACTCTTCAGGCTAAGCATGACATCTACCAAAATCCCTTTGTCTCGGTTTCTTCCAAATTTATACTTAGGCCAACATCATGTTTTTATTTTCTGTATCCCTTTTTGCGAGCACCGTTTTATCCCAGCTTTGAACTGTCTGGATAAATATCTGTTTCGAATGAGGGAAGTTTTCAGTAAC | |||||||||
gi|36010155|gb|CA281135.1|CA281135 SCRFSD1022B02.g SD1 Saccharum hybrid cultivar (mixed) cDNA clone SCRFSD1022B02 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): ATTTCAAGTCATAAGTACTTAAATAGGAGCATCTCACACTTTTGTTGGCTTAAGGTGTGTTTACTTCGCGAAAAGTAGGTGAAAAGTTACTGTAGCATCTTTCGTTGTTATTTGAAAAAATTTGTCCAATCATGGACTAACTAGGCTCAAAAGATTCGTCCCGACATTTAGACAAACTATGCAATTAGTTATCTTTTTTACCTACATTTAATGCTC | |||||||||
gi|166795188|gb|DV735422.1|DV735422 SUS01-153-F06-A-057.b Sugarcane mature stem library Saccharum hybrid cultivar CoS 767 cDNA c TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): TGTCCAATCATGGTCTAATTAGGCTTAAAAGATTCGTCTCGTTCATTTCGTCTAAACTGTATAATTAGTTTTATTTTTTATCTATATTTAATGCTTCAGTCATGCGTCCAAAGATTCGATATGACGGGGAATGTTGAAAAATTTTGCAAAATTTTTTGCAACTAAATAGGGCCCATTCTCATTCCTCGTCACCGTACTCTGTAGTTGGTAGTCATGACTCATGACACATTGTCGTCCCACCGTCATTCACATGTCCACCCTCCGCCACGTTGAGCATATGTGTGGTTTAAGTTTATACCAACTCTGGCGTTTGCTATACTTCCTTCGTACTAAAAAATAAAGTCGTTCTAGGGGTAGAGGACTGTTTTCACATATGAAGTCGATCGTTTAGGCTCTTTTAATCTTCTTTTGGATGCGAATACC | |||||||||
gi|36009125|gb|CA280799.1|CA280799 SCVPFL4C11D09.g FL4 Saccharum hybrid cultivar (mixed) cDNA clone SCVPFL4C11D09 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CGACCGATTGATGCACATTGAGCGCAAGGCCTAGCTAGCTATAGTGGTCGATCGTACGTAGTAAGTACCCGCTGGGGCTACGCAAGCTGAAGCATACTCCCTCCGTCACATAATACCCGTCGTTTTTTGTCGTGCCACAAGTTTAACTCGATTTGTAGAAAATACGTGCAATATTTGTATCTCCAAATAAATTTATTAAAAAACTAGATTCAAAGATCTTTCCAATTATATTTTAAATATTAATATTTTTTAATATATATTTTGTCAAAGTTGTTTCTTGGAAAACAAAAACGATTGATATTTTGGTACGGAGGGAGTACGCATGGTTCCAATAGAGACGGTAGACACGGTACACATCGGAACATGCATGGTCATACCGTGTTATATACTACTGTTTAATTATTATCAGTTCATTTGTTTCTGGCATGGCTTAGATGCCCGATTCGGGGCACTGAATAGCTACAGTGCGCAACAAATGCGTACTATAGTAATTTTGTTTTTATATGGTAAAAATTGTCTAAATTTTGACTAATTAGGCTCGAAATGTTCGTCTCGCAAAGTATAACAAAAATGTGCAATTAGTTTTTGATTTCATCTACATTTAGTACTGCATACATATGCCGATATTTCGATGTGACGGAGAATCTTCTTTTTGCATAGTAAAATTTAGGGATGAATTTAGGGGCTTG | |||||||||
gi|268795578|gb|DV641303.1|DV641303 SUR01-188-F03-A-027.b Sugarcane root library Saccharum hybrid cultivar CoS 767 cDNA clone SU TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): ATAAAAAAATATAGAGAGTAATTGATAAGTTCACCATAACGGAGGCGGGGACACTGTAGCATTTCGTTTGTATTTGATAATAATTGTCCAATCGTTGACTAATTAGGCTCAAAACGTTCGTCTCGTAAAGTACAATCAAAATGTACAATTAGTTTTAAATTTTATCCATATTTAGTACTTCATGCATGTATCGCAAATTTGATGTGACGGGAAATCTTTTTTTGTATAGTGCAATTTTCAATGGAATTAAACAATGCCTGTATTTTGTTACAAGCGAATCTTTCTGTCTCGCGGTAGCACTCACCATGGTTTTAATGCTCTCTCCAGGGATGTACTACTACTTAACTTTATAGGTTCATATCCAAGTGTTGAGATAGTGATGGTGTTTTGTTACGGCCGCACAATCAACCACTGTTTCTGCACTTCTACAGTT | |||||||||
gi|36006181|gb|CA279779.1|CA279779 SCCCLV1001D11.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCCCLV1001D11 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CGTTTGGATGCCAAAATTTTTGGCAAAACGCTACTGTAGCGTTTTCGTTGTTATTTGGCAAATATTGTCCAATCATGGTCTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTCGTCTAAACTGTATAATTAGTTTTATTTTTTATCTATATTTAATGCTTCATGCATGTGTCTAAAGATTCGATGTGACGGGGAATCTGAAAAATTTTGCAAATTTTCTGGGAACTAAACAGCCCCTCAACACAAAAGCATCATACACTCTCTCTCAGACGCGCATCGTCAACCATGGTTGTCGAGATGAAGGAGAACGGCGGCGTGGCGTTGGCGGCGGGCGAGAAGGCGCCGCAGCTGGGCGTGAAGCGCGGCGAGCCGACGCTGGTGCCGCCGGCGGAGGCGACGCCGACGGGCGAGCAGTACTACCTGTCCAACCTGGACCAGAACATCGCGGTGATCGTGCAGACTGTGTACTGCTACAAGCCCTCGCCGTCTCCCAGCGGCGGCGGCAAGGACGTCGACGT | |||||||||
gi|268805623|gb|CN607923.1|CN607923 SUL01-020F-D01-010.b Sugarcane leaf whorl library Saccharum hybrid cultivar CoS 767 cDNA clo TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): TTGTTATTTGGTAATTATTGTCCGATCATGGCCTAACTAGGCTTAAAAGATTCGTCTCGTCCATTTCGTCTAAACTGTGTAATTAGTTTTATTTTTTATCTATATTTAATACTTCATGCATGTGTCCAAATATTCGATGTGACGGGAATCTGAAATATTTTGGGAAATATTTTGGGAACTAAACGAGGGCCTAATTCCAAAGCTTCAACATGCAAATATAGTTAAGCTTCTAGGATATTGCACCCAAAGGAGAGAAAGGATCTTGGTGCTCGAGTATATTCCAAATGGAAGCTTGGATTCCTTCATACATGGCATGTTTCAACTAGTTTTACATACTGAAGTTTGAGAACAAATTATAAAATTCCCATGCATGTATGTGCATGATTTATTTACAGGTGCGAGAGCAGTGGAGGCACTGG | |||||||||
gi|36075300|gb|CA300686.1|CA300686 SCSFLV1047E08.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCSFLV1047E08 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTTGTAATTAGACCATGATTGGACAATATTTACCAAATATCAACGAATAGTGCTACATAGCCATTATGGACTGTACTGCCCAATACTGCGCTAATACTGCTAAAACCATGCCGCTCGTCCATTTAGTAGTTATGTTATATCATTTATCTATATTTGATGCTCGATGCATGTGTCCAAAGATTCGTGACGGGGAATCTGAAAATTTTGCAAAATTTTCTGGGAACTAAAGCGGGCGTACGTCTGTTGCGTAAGCGCTGCGGGCACACAAGGAGGGATAGAGTCCGGAACGACGGTATTCGGGATAGGGTTGGGGCGGGCACCAATTGACGAGAAATTGATTCAACATCTGCGGAGATGGTTTGGACATGTACAACGAATGCCTCCTGAGGCGCCGGTGCGTAATGGGGTTCTAAAGCGGACTGATAATGCATAGAGCGGTAGAGGTCGACCTAAACTAATGTGGGACGAGTCCGTCAAAGAGACCTTAGAGAGATTTACTATGGACAAGAACGCTTGAAACTGGCAAACCGTGTTTGACCGGGACCTATATCTGGCTAGGCCTATTATGGTCCTTTGTGGGTCTACCGGTATACGCCCTTTTGGGTTCCTCTGTTCCCATTCCCGACTTACTTGGGA | |||||||||
gi|36019805|gb|CA283832.1|CA283832 SCMCSD1059H05.g SD1 Saccharum hybrid cultivar (mixed) cDNA clone SCMCSD1059H05 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CATTCTTTTAGGGCGTGTTTAGATGTGAAAATATTTGGGGAAAAGTTCCTGTACCACTTTTCGTTGTTATTTGGCAAAATTTGTCTAACCATGGACTAACTAGGCTCAAAAGATTCATCTCGACATTTACAGACAAACTGTGCAATTAGTTATTTTTTTACCTACATTTAATGCTCCATGCATACGTCCAAAGATTCGATGTGACAGTTACTATGCAAAAAATTTTGGCTCTTGTTGGTATCTAAACAGGCCCTTAGTCGATCAAGGACATGGGATAAATTTGTAATGGTCACGCTCCGCCACTGCGTACAGCAGCAGGTGCCTGAAGAAGTTAAGTGCTTGTGTGATCAGGCCCTTCAAGATCAACAATGGGATTGTTATGTGGGTCAAGACTTGCACTTGCACGAACAAGAAGGATGGCATGCACAGCACAAGCACAGTGGCTAAGCATCAGGCAGCGGCTTCTGAGCTACTGTATTTGGGTCTATCTTTTGGTTATATTTGCTTGGAAGTCTTCGATGGAACTTTGTGTTTGTGAACCTGTGAGCTAACTTAAGGAAGTGGGTGGGCTTTAACCTAGAAGTCGTATAACAAGAACACTTTGTGCTTCTTTTTCCCAATAAAAAAAGGGGCTGAATGAACTTTTGGGGAATTTTTTTTAGTCTCTG | |||||||||
gi|36068619|gb|CA298376.1|CA298376 SCRFFL8035F11.g FL8 Saccharum hybrid cultivar (mixed) cDNA clone SCRFFL8035F11 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): AACTGTAGCATTTTCATTGTTATTTGGCAATTAGTGTCCAATCATAGTCTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTCGTCTAAACTGTGTAATTAGTTTTATTTTTTTATCTATATTTAATGCTTCATGTGTTCAAAGATTCGATGTG | |||||||||
gi|35978637|gb|CA270812.1|CA270812 SCRULB2063G11.g LB2 Saccharum hybrid cultivar SP80-3280 cDNA clone SCRULB2063G11 5', mRNA seq TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CTTCAGTACCCCTCCGAATTTCTCGTCACCCCGCGTGGCTCCATACAAGGTGGTTAGACCATATTTAATTCGCTATCTTTCACATCCAATGCACTGAGAATAAATTTACTGGTATCTGTTTAAATATTGTGTGAATCCACACCTGCTCCTTGTTTAGTTCCCGAGTCGGACGCCCCGATTCAACACTGCGTGTAACACTGCGACTGTGTTTTGATTTTTATTGCAAAAAAATTGTCTAAATATTGATTAATTAGACTCAAAATGTTCGTCTCGCAAAATATAACACAATTGTGCAATCAGTTTGTGATTTCATCTACATTTACTACTCCATGTATTCGCTGGTATTATGATGTGATGAATAATCTCCTTATTGTATAATAGACTTTAAGTGATGAATTGGATACTAAACAAGGCTATTGCCCTACTTTTGACCGATTAGCTGGCAGATGAGATTAGTACTAATGTTGCCTTTTTTTTTAGTTGCAGACTATCTTTCTCTTTGAACATTTATCCCATTTTTACTTAAAAATCCCCACTAAATTTTGCTTGTACTATCATAACTAATTTCTTCATCCATTGACTGGGCTACTACAACTCTAACTTTCTTCAAGAGCTTCCTGATCAATAATATCCTGGGATATTATCTTGTATAACCTTCTATACCT | |||||||||
gi|36011709|gb|CA281682.1|CA281682 SCRFSD2019E03.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCRFSD2019E03 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): GCGTCGCCGCTCCTCCGCTCGGCGTCCCGCCGCCAGTTCGCAGGTTAGTCTGCGCTTGTGATGGGCAACAAGTTCGAGTGGTGCTTTGTGATACGAGAGGCACCGTTCGGCGTGTATAACAGTACAAGTGTACATATACGTATTACGTACGTATACCAGGTGTGTTAATAAGCCTTCGAGAGTGAGAGAAAAAAAAAGGGTTGTTTTGAAGAATAAGGGCATGGTCAGAGGGTGGTCCAAAGGAGCACCTCAACTGATGAGAAGAGAAGGCAAAGCTGCTGCTTCAAGCCCAGCTGGTGGTTGTACCTGTAATCCTGTAGGCTTTAGCTGTTGCTCTAGTAGCGGCCATATATATGCGAAGCACAAGTACTCCTATCTGTTGTGTACGTGCTGAGGGTGTGTTCGCTTCGCGAAAAGTAGGTGAAAAATTACTGTAGCATCTTTTGTTGTTATTTGGTAAAATTTGTCCAATCATGGACTAACTANGCTCAAAAGATTCGTCCCGACATTTNCNGNCNNNNA | |||||||||
gi|36036929|gb|CA288028.1|CA288028 SCEPSD2069A05.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCEPSD2069A05 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): TCGTGCCCGATCCGGTCGAGCCCGGCAAGCCCGCCACTTTCAAGATCTCCGCTACTACTGATAAAACCATTGAGAAGGGGAAGCTGCAAATAGATGTTAAATATTTCTTCTTCTACGTACACTCGGAAACTCGCGACATCTGTGGAGAGACTTCCTGTCCAGCAACTGGTGACTTCGTGCTGTCTCATGAGCAGACATTACCAGGATTCACTCCACCGGGCTCTTACACGATCTACATGAAGATACTTGGGGACGAAAACGAGGAACTGAGCTGCATCTCGTTCGGGTTCAGTATCGGGTTCGTCGCCTCCAGCTGAATGCGTCTGAGCTGAGCACCAGAAGTAGCCCATGGATGATGTAATTATGTAAACCACTCTGTATCGTATATCGTATAACTCCCAGTGTCGAGGTCCATGTATGCTTTGTGGGTGTTGCAGAACTGTCTTGTGTTCAACTAGGGGGGTGTTTGGTTTGAGAGTTAAAGTTTAACAAACATTATAGCACTTTCATCTTATTTGTCAAAAAGTTTCCAATCTTGGACTAATTAGGCTTAATAGATTCGTCTCGTAAATTATTCCT | |||||||||
gi|36003294|gb|CA278783.1|CA278783 SCCCSD2093A07.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCCCSD2093A07 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): TTTGTAATGAACCCTACGTAGGATAAGGTGAGACCCTCGTACGTTGTACAGTAGGTAGTGTATTGGACAGTATATATACGAGTGATGACATGTGCTGCTATGACACTAGGTAAAAGGTAGGAGCTTCTGTAGCTGGGTTATTTCCCAGCACTGCATCATGTGGGAGATATAGATACCTGGCCCTTGTTTAGATGCCGAATCGGCACACCCGAATTGCTATTGGTAAAAATTGTCTAAACTTTGACTAATTAGGCTCAAAATGTTCGTCTCGCAAAGTATAACAAAACTGTGTAATTAGTTTTTAATTTC | |||||||||
gi|36057245|gb|CA294544.1|CA294544 SCSGLV1013D11.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCSGLV1013D11 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): ATATCTTACGACAGTACGGTGGGAATCCCGGGATCGACCCACGCGTACGAAATTTGGCTTATCTCACCTTTCTTCATTGATGATTTCCCTCCATTTATATATTTATATCAGTGTTGCATGAAATTCAACAATTTGGTGGTCCCTGTGGGACGTGCATTTTTAATGTCCTTTTATAGTTTTGATGCTCCATTCTTATATGTTTTTTTGTGAACGCAAAGTCTTATGGGTTCTCCACTTTTTATTCATAGTTCTGACTTATGTCATGAGAGTCAATTTGTGTATTCTCTGTACTTAGTGACGTGTTTTTTAGATCAATATTATTCCGGATCTGAATATAATTGGCTTGTCCAGGTGATTGACTATTACTCCAAGAAAGGCTTAGGGTGTGTATAGTTCCGCGAAAAGGTGTAAAAAAAGTACTGTAGCACGTATTGGCTTTATTTGGTAAATAGTGTCCAATCGTTGACTAATTAGGTTCAAAACGTTCGTCTCGCANAGTACAACCAAGCTGTACAATTAGTTTTTGATTTCATCTACATTTAGTACTCCATGCATGTATCGCAAGTTTGATGTGACGGGGAATCTTTTGTTTGCACAGTGTTTTTTTTGAGGAACTAAACACAGCCTTAGTGGTGAACCTGCCTGCCGAGAAACCACCAAAGGAAGTGACTGCTGANGTGCANAAAGCACTCTC | |||||||||
gi|239916393|gb|GE325036.1|GE325036 ScPhySHF 223 Saccharum officinarum CoC671 ESTs from the Forward SSH library Saccharum hybrid TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): ACAATAACAATAAAATATGCATATTTATGTAGGTAAAAATAAAATTAGCTAGAACCCATACATATTTACACATGTAAAAATCAAATATTCTACCAAATAATTTTGTTGGAAGAAATCTAAATCCCATAACACTTCATATAATTACAATGTTAATTAGTTTCATGTTGATTGTGATAAACGTAGTCCTTTAATTCACTTAATTATGGATTAAATAGTTGCTTAGCTCATTTAATCACGTTTAATCTGATTTTGTTTAGACCGTTTAGACGGGATTGAACGGTTTAAACGGGTTTAAACGGCCCAACCGTTTAATTCACCGTTTAGGGCCTAAACAACACGGCTGACTTCTGTTTACCGTTTAAACGGTGTTTAAACGGACTAAACGGCCGTTTAGGCGAACAGTCATGGACTAACTAGGCTCAAAAGATTCGTCCCGACATTTACAGACAAACTATGCAATTAGTTATTTTTTTACCTACATTTAATTTTCCATGCATGCGTCGAAAGATTTGATGTGATGGGTGAAAGAGGAAATATTTTGGGTTGGGATGGGAAGTGAACGACTAAATAATCTCAGAGCCGCAAGTTGTCAGTCGACGTCACAACAAGTTGT | |||||||||
gi|36026340|gb|CA285641.1|CA285641 SCEZSD1079G02.g SD1 Saccharum hybrid cultivar (mixed) cDNA clone SCEZSD1079G02 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CATACATGTGCCGCAAGATTTGATGTGACAGATACTGTAGCACTTTTTGGGTTCACTTTTCGTGAACTAAGGGCCGGTTTAGTTCCGAAAAATTTGGCAAAATAGCACTGTAGCGTTTTTCGTTGTTATTTGACAAATATTATCCAATCATGGTCTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTCATCTAAACTGTGTAATTAGTTTTATTTTTTATCTATATTTAATGCTTCATGCATGTGTCCAAAGATTCGATGTGACGGAGAATCTGAAAAATTTTACAAAATTTTCTGGGAACTAAACAGGTCCTAAACAGGCTCGATGTCTCGCTCCATCGACGAGTAGGACACAAGCTTCAAGCTACTCCGTAAATATCGCTAGCCCAGTCCAAACAGTATGTTTAAGATACTGTTCCACTACTTCCAAAGAGGAATCTAGCAACTCATCAACAAACTATATACAGTACTCCTACATTTGGATTTTTGGAGAAGATGTCCAAAGCATTGCGCACAGAAAAATATATACTCCTACCGCAGCAGCAGAATTAAGGGGGTGTTATGAAAAAATTTTAGAATTTAGCTTCTATTACACTTTTATTTATATTTGGGAATTAATGTCCAATCATAAACTAATTTGGGTCAACCCAAAATTTGACCTATGAATTTTTACCCTAACCGGTTAAATAAGTATTTTTTTG | |||||||||
gi|36077261|gb|CA301352.1|CA301352 SCCCSD2C04B02.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCCCSD2C04B02 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): AATAACAAACAAGAGTGACAAAGGCACTCGGGTCAGAACCCTTGGTTCTAGGGAATTTATCCGCTACTATCGCCAGAAACCACGGCCTTCTGTTGCAACAGACCGTGCGCTTGCACTTTCACTGGCTTCCAGCTACAAGAGCATGGGTTTGGTGACTGTTCAGTCTAAGGAGCAGATGGTAAGGTTGAAAGTTCTCCGTGCAATGAACAGGACCGGGGTCGAGACGATGCGAAACAAGATCGGGATGAAGAGCAATGTGATCCGGAACCTCCCTAAGAACTGTCCGTATTAGACACTGCCTTTTCCTGCACCCAGTCTGGAGCTCCTCCAGACATTTATATGGTGTCTTATGGTTTCTTGTCTATCACTGACAATGTTGGCGCTTAAGATATTTGGAATAGGAGTATACCTTCCATACGAAGGGGTGTTTGGTTTGGTTTGTTAAAGTTTAACAAACACTGTAGCGTTTTCGTCTTATTTGATAAAAAGTTTCCAATCTTGGACTAATTAGGCTTAATAGATTCGTCTCGTAAATTACTCCT | |||||||||
gi|36041916|gb|CA289572.1|CA289572 SCAGFL8006F02.g FL8 Saccharum hybrid cultivar (mixed) cDNA clone SCAGFL8006F02 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): GGGTCGACCCACGCGTCCGTGCATTGCTTCAAGGAACACTGGAAGTTGATGGTGTGCCCTTCAAGGAGATACCAAGAGAAGCATGTCCGGCGGTGAAAAGAGGGTCCGTTGCCTGGGTAGGGTCAGGGCCAGAGTTCCTGATCAGCTTAGCAGACCACGAGGAGTGGAGGGACGCCTACACCGTGTTCGGGAATGTGCTTCCCAAGGACATGGCGATCGCAGAGGAGATGGCACTGCTGCCGACAAGCACAGACGTGTGGAGCAATGTTACGGTGAAGGTGCTGAAAGATCCTATCTACTTCAAGGTGAAGAGAAGCAGCAATGCTAGCGCTGTCTAGGTGATGGGCATTTATTTTGGATGAAAGACTGGCAACACCGCCAAAAGTTAAAGCGGATGATGGCTTCACTGTGGCCTTGTTTTAGTTCCTCAATTGGGGGATGGCCAAATCACTAGAGCACACTATAATTTTTTTATTTTTATTTGGTAATAATTGTCGAAGGGTAGGCCTGATGCAGTTGGTGAGTGCTAGCTCGCCGAGTCACCAGGTCCTGTGTTCGAAGCCGTCTCTCTGCAGAATTTCTGCGGNGGCAAGACTNTGCTTCGGTTATTCCTTTCCCCAGATCCCACTCGTGTGGGAGCCTCTGGCACTGGGTCTGCCCTTTTTTGGTAATAANTTGTCGAATATTTGATAATTAGGCTCAAAATATTCGTCTCGCAA | |||||||||
gi|36002121|gb|CA278392.1|CA278392 SCBFSD2038B08.b SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCBFSD2038B08 3', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): AATAACAACCAAGAGTGACAAAGGCACTCGGGTCAGAACCCTTGGTTTAAGGGAATTTATCCGCTACTATCGCCAGAAACCACGGCCTTCTGTTGCAACAGACCGTGCGCTTGCACTTTCACTGGCTTCCAGCTACAAGAGCATGGGTTTGGTGACTGTTCAGTCTAAGGAGCAGATGGTAAGGTTGAAAGTTCTCCGTGCAATGAACAGGACCGGGGTCGAGACGATGCGAAACAAGATCGGGATGAAGAGCAATGTGATCCGGAACCTCCCTAAGAACTGTCCGTATTAGACACTGCCTTTTCCTGCACCCAGTCTGGAGCTCCTCCAGACATTTATATGGTGTCTTATGGTTTCTTGTCTATCACTGACAATGTTGGCGCTTAAGATATTTGGAATAGGAGTATACCTTCCATACGAAGGGGTGTTTGGTTTGGTTTGTTAAAGTTTAACAAACACTGTAGCGTTTTCGTCTTATTTGATAAAAAGTTTCCAATCTTGGACTAATTAGGCTTAATAGATTCGTCTCGTAAATTACTCCT | |||||||||
gi|36002248|gb|CA278434.1|CA278434 SCBFSD2038F11.b SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCBFSD2038F11 3', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): TGGTGTGAGTGTGACGTGCGCATTGGTAGCGAGAGGCTCTTGCATCTTGGTGGTGTAACATATGTCCGTAAGGATTGGCTGATTGGCATTGGCTGCTTGTAAGTATGATAGCCATGATGAATGAATCTAGGGTGTGTTCACTTCGCGAAAAGTAGCTAAAAAGTTACTGTAGTATCTTTCGTTGTTATTTGACAAAATTTGTCCAATTATGGACTAACTAGGCTCAAAAGATTCGTCCCGACATTTACAGACAAACTATGCAATTAGTTATCTTTTTAACCTACGTTTAAT | |||||||||
gi|36076728|gb|CA301169.1|CA301169 SCCCLV1C04E11.g LV1 Saccharum hybrid cultivar (mixed) cDNA clone SCCCLV1C04E11 5', mRNA seque TTCGAGACGAATCTTTTGAGT EST sequence (targeted fragment marked with yellow): CTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTTGTAATTAGACCATGATTGGACAATATTTACCAAATATTAACGAAAAGTGCTACAGTGCCATTTTGGTAAATATTGTCCAATCATGGTCTAATTAGGCTTAAAAGATTCGTCTCGTCCATTTTGTAATTAGTTTTATTTTTTATCTATATTTGATGCTTCATGCATGTGTCCAAAGATTCGTGACGGGGAATCTGAAAATTTTGCAAAATTTTCTGGGAACTAAAGCGGGCGTACGTCTGTTGCGTCGGTGTTGTGGGCACACAAGGAGGGATAGAGTCCGGAACGACGGTATTCGGGATAGGGTTGGGGTGGGCACCAATTGAGGAGAAATTGATTCAACATCTGTGGAGATGGTTTGGACATGTTCAACGAATGCCTCCTGAGGCGCCGGTGCGTAATGTGGTTCTAAAGCGGGCTGATAATGTTAAGAGCGGTAGAGGTCGACCTATACTAATTTGGGACGAGTCCGGTTAGAGAGACCTTAAAGAGATTTACCTTGGACAGGAGCGCTTGTAGACTGGCANAACGTGCTTTGAACCGCGACCTCTTTCTGCCTCGGGGCTTTTA | |||||||||