| mature miRNA: CAGAAGATAGAGAGCAC species: Salvia miltiorrhiza database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|51957045|gb|CV167905.1|CV167905 rsmsxl_008505.y1.scf cDNA Library of Salvia miltiorrhiza Salvia miltiorrhiza cDNA 5', mRNA se CAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): AACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTCTCTCTCTCTCTAGAGACTGTATTCGCGACACCTTTTCTGCTGCCATATTCGAGAATCAACACCCCATGAGCTAGCGGGTTGATCAGATCAAGAGGAATAGTGGGCTCTATCTTGTGGTGGATGTTTAGATCTGGGCTTCGGAAAAGGAATGATTTTTCCGAGTTTCGGTTGTAGCACTAGTGTCACCTGTGGATGAAGTATTGGTGTAGATCAATTCTCCATTGGGTTTCTCAGTTTATTGCATGCATGGGAGGTTGTCTTGGATG | |||||||||
gi|51959083|gb|CV169943.1|CV169943 rsmsxl_011377.y1.scf cDNA Library of Salvia miltiorrhiza Salvia miltiorrhiza cDNA 5', mRNA se CAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): CTAGTGGATCCCGGGCTGCAGGAATTCGGCACGAGGCTCTCACATTTCTTCTCCCATCCGTGCTCTCCCTTGTCTTCTCTCTCCCTCTACCTCACCCTCTGCCGACTTTCTTCCACCTGCCGGCGAGAAGCTCAAACGTTCTCTCTATCGTCTTCTCTCTCCCTCTGCCGGAGAAAAACCTGCAACCGTTTAACCGCAAAGCCGCGGTCCGAAAACCCTTAGATCCCTAAACTACCAACTCCGGCCTCACATCTAGACGACGCTCCACGAGGTGTCGCCTCTCTCCTCGACGACGATAAATGAGCCGCTGCCTCCCTCTGCTCAGCCCTTATCCAGCCGCCGCCGTCCGAGTTTCAAACTACGGCGTCGCCCAGCCCTAGCTTCCAGATCTCGGCCTCCTCCCTCGACTGCATCTTTAATTCTTGCGATCTCCATATCTCAGTGGTAATACTTCAAGATCTCAGTGGTAATACTTCCACGGAAAGATTAACTACAATTCTCTGCAGCGCCGTACAAAAAATGGTGGAATCGAAGTCAATATAGGGAACTGCAGACCAAATCAACCACGCAATTACTCCCTCCACTTCA | |||||||||
gi|51958021|gb|CV168881.1|CV168881 rsmsxl_009958.y1.scf cDNA Library of Salvia miltiorrhiza Salvia miltiorrhiza cDNA 5', mRNA se CAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): CCCGGGCTGAGGAATCGGCACGAGGCAAATTAGAGAGATTTAGAGTGAGAGAAATGGGGAGATCGGCGACGACGAAGGATGCCCACGCCCTGTTTCACTCTCTCCGCTCTGCCTACGCCGCAACCCCTAATCAACTCAAGATCATTGATCTCTATATTCTGTTCGCTGTCGTCACCGCTGTGATTCAGGTTGCTTACATGGCTATTGTTGGATCATTCCCATTTAACTCCTTTCTTTCTGGTGTACTTTCATGCGTGGGGACTGCTGTACTTGCTGTTAGTCTCCGAATTCAAGTAAACAAAGACAACAAGGAATTCAAGGATTTACCTCCTGAACGTGCTTTTGCAGAT | |||||||||
gi|51955213|gb|CV166073.1|CV166073 rsmsxl_006056.y1.scf cDNA Library of Salvia miltiorrhiza Salvia miltiorrhiza cDNA 5', mRNA se CAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): CGGCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGGGAAAGGCTCGTGTCATTCAGCAGCAGCGCGCCACAGATAGTAGCTGGTGGTGGTGTGGTGGGATACCCTAGGTCCGGGGTGGTTGTGAAAGACGAGAATGAAATAGGCGCGTTGCAGCAGCATCAGCAGCTCAACTACATGGACTCAGCAGCATCAGCAGCTCATCATCATCATCATCAACATCAACTCAGCAGCTCCCCAGCCTTTGTTGATCCAAATGTGATGATGGAATGTGATGGTGCTCTCTCTCTTCTGTCATCGCCCCCTCCCGCCATCATCGACTATCATCAAACCACTTCTCCCACCTTGCATTTTCCTCACCAAAATGTTGGATCATCCCATCAAACTCTCTCTTTCATGTGGGACTAGGACTACCTGCC | |||||||||
gi|51955817|gb|CV166677.1|CV166677 rsmsxl_006819.y1.scf cDNA Library of Salvia miltiorrhiza Salvia miltiorrhiza cDNA 5', mRNA se CAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): GCGAGAAGCTCAAACGTTCTCTCTATCGTCTTCTCTCTCCCTCTGCCGGAGAAAAACCTGCAACCGTATCACGGAAAAGCCGCGGTCCGAAAACCCTTAGATCCCTAAACTACCAACTCCGGCCTCACATCTAGACGACGCTCCACGCGGTGTCGCCTCTCTCCTCGACGACGATAAATGAGCCGCTGCCTCCCTCTGCTCAGCCCTTATCCAGCCGCCGCCGTCCGAGTTTCAAACTACGGCGTCGCCCAGCCCTAGCTTCCAGATCTCGGCCTCCTCCCTCGACTGCATCTTTAATTCTTGCGATCTCCATATCTCAGTGGTAATACTTCCATGGATAGATTCAGTCTTACAGTCTTAATCTTCTGCGGCTTTGATCTGCTGCAAAAATTCAGAAAGATTAGCTACATGTCTTAATCTTCTGCGGCTTTGATCTGCTGCAAAAATTCAGAAAGATTAGCTACATTTTTAGACTTTGTGTGTAAAGTA | |||||||||