| mature miRNA: GGAATCTTGATGATGCTGCAT species: Saruma henryi database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|74114510|gb|DT603365.1|DT603365 she01-12ms2-c08 She01 Saruma henryi cDNA clone she01-12ms2-c08 5', mRNA sequence GGAATCTTGATGATGCTGCAT EST sequence (targeted fragment marked with yellow): GGATTAGTCTTAATTTTTTAGTGTTGTTTTCTCAAAGCAAAAGGTTCTTCTCCCAAGTGGGTCTTTTACAATGATTCTAAAGATGGGTTTCTGTAGCTTTCTCATCACATTCTTTTCTTCTCAATCTACACTTTGGCTACAGAGTTCAGGGTTTGCTTTAGGTTAAAGGATTATCTGCTTTTCTTTCCCCTTTCATCTTTTTTGAATTTTTTGGTGTTTTTGTGCATGGGGGGATGATTGATGAAGATCTCTGTAGAGGGAAGCACAGTCACTGTTTGCGGGTGTGGCATCATCAAGATTCACAAAACTTTGAAAGGGGGTGTTGAGTGGCAGTGCATGAGATGAGGTGGTTGTGGATGGTGGCCCCTCACAGTACCCCCTCGAGATGGGAATCTTGATGATGCTGCATCGGCAATAAGTGACTACTTTTTTAAGCTGCAAACCAAGGCATGCAACAGAAAGAGATTAAGAAGAGGAGAGAGCGCATACATTAAGGAAATTGGAACTGCTAATTAAGCGTGATTTGTCGTGAAGATAGATGTTCGTCCTGGTGCCTGTTACACGACATGGTTATAGCCCCATATTAAACTGTATTCGAGCCGCACCAGGGGTTATATATAACTCTGCTGTAGAGGTTGATTTGTCGTGAAGGGGAGTATTACCCTTTCTTTGAAGCTCTTATATTAAGGAGAACAGAAAAATAGTTCACTTATGTAGTAAGAAGATTCATAAACTCTAATCAACAGTTTATGCCCTTTTTTGATATGCTTTTTATTT | |||||||||
gi|74106908|gb|DT595635.1|DT595635 she01-17ms1-b08 She01 Saruma henryi cDNA clone she01-17ms1-b08 5', mRNA sequence GGAATCTTGATGATGCTGCAT EST sequence (targeted fragment marked with yellow): GGGATTGCTAAAATGGAATATATTTACAAATGTTACATGTGGTTAACAGGAAGAAACAAATGCAACAAGACTTGCGAGTAGTATCATCAAGGTTCCAAAAGTTACCAGTGTAGCCCAAAACTGCCTGCCCGCATGAGGGGATGAACCAAATATATACCTAGTGTCACAACAGTTATTGTGAGATACGGTAATCTCACAAATTCCTTGTAATAATCCTTGGGCAACTTTTGACGACCTTGTAAAATTGCAGCAAAAGGAATGATACTCGTCCGGCTCTTGACAATTTCAAAAGCTTCACCGTATCTCGTTGCCAGCCTCCTATCGCCGTTCCAAACGCCGAACAGATGGTGTCCTATTAAGCCTACTGATGCCGCCACAACAACTGAGTTTCCAACCCAAAGTGTGTGGGCGAAGCACCAGATCACCTGTCCAACCATCTGTGGATGCCTCGTGATTCTCATAATCCCTGTTTCCCACAGATGCATTTTTGGCTTATCCACTGCTGCTACTTCTAATAAATTGAAGGTCGACGGGTAGAGGAAAAAGAAGGAGATAAAGTTCAGCAGCCATACAAATTGATGGATTCCAGGGAAACTCTGGACTTGCCATAACTGTGTACCGTCGTATCTGTGGTTGATGAAGTATACAATGGCACTGAAGGCCAAAGGAAGGGAAGTCCCTGCAAACAGAACCCTGAATGCCCTCTCTCCTATGAGATTTTCACCGGCATCTCTAACACTGGCCAAACCGCTGTGAACAGTGGCAAAAATGATAAAAAAGACAAACATTACCACCTCATGACTATCT | |||||||||