| mature miRNA: AGCCAGGGATGACTTGCCGAG species: Solanum melongena database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|261700772|gb|FS060445.1|FS060445 FS060445 library SEP Solanum melongena cDNA clone SEP04I13 3', mRNA sequence AGCCAGGGATGACTTGCCGAG EST sequence (targeted fragment marked with yellow): ATGGATAATCGGCAGTTCATCCTTGGCTATGTTACTCTCCCTTTTCCAGATTGAAACCTTTAACAACACTTTTTCCTAAACTTTGGTCGTGGTATGGTATATGGTTCATGGTTAATGAGAAAAAGAGCGCAGGTTGGTGCTGCACGTCATCAAGAAGGGCAAGGAAAGGAGAAAAATATATTGTTCTTAATCAGAAATAGTGGAGATTAAGGCCGTTTTCTCCTTCTCGTGGTCGAGCGTGTATGGATCATCTTGCACTTTTATGTCTGTACTTGTTACTGTTGTTTGCATTTGTGGTTTTCGTTCTTCTGTGCTTTGTATTGTTCGAATTCTTAATAATTTTCACTGGGGCTTTATGCAACAAGATGAACTTATTGAG | |||||||||
gi|261722462|gb|FS096171.1|FS096171 FS096171 library YFR Solanum melongena cDNA clone YFR03M01 3', mRNA sequence AGCCAGGGATGACTTGCCGAG EST sequence (targeted fragment marked with yellow): CAGAGAGTGGTAGTTGGGGGACTTCCACCCAGTCTGGTTCTGATGTGACAAGCATCTTCAATGGCGATGACATGTTCCAGCAGCCAGAGTTCAGAGTCTCTGGCTTCCCTTTTCACATGGGTGCTACCATGCAGGAAGCTGAAGACTTCATGCATGTTGGAACCTGACAGCACGCTTGTCTTATCCATGGTGGCGGTGCCAACACAGGCTGCATTGCAAATGCATTCTTATTGGTTTGGTGCACACAAATGGATAATCGGCAGTTCATCCTTGGCTATGTTACTCTCCCTTTTCCAGATTGAAACCTTTAACAACACTTTTTCCTAAACTTTGGTCGTGGTATGGTATATGGTTCATGGTTAATGAGAAAAAGAGCGCAGGTTGGTGCTGCACGTCATCAAGAAGGGCAAGGAAAGGAGAAAAATATGTTGTTCTTAATCAGAAATAGTGGAGATTAAGGCCGTTTTCTCCTTTTCGTGGTCGAGCGTGTATGGATCATCTTGCACTTTTATGTCTGTACTTGTTACTGTTGTTTGCATTTGTGGTTTTCGTTCTTCTGTGCTTTGTATTGTTCGAATTCTTAATAATTTTCACTGGGGCTTTATGCAACAAGATGAACTTATTGAAC | |||||||||
gi|261699411|gb|FS028906.1|FS028906 FS028906 library OVL Solanum melongena cDNA clone OVL04B18 5', mRNA sequence AGCCAGGGATGACTTGCCGAG EST sequence (targeted fragment marked with yellow): AAGTATCAGCAAGATGGATCTTCGATCATTTCTAAAATGGGCTGCCATTCATCTTGGCTACTCATCCCTGGCAGAGATCGAAGCTGCACCACCCACTGCTGAATTAGAGCCTATACGCGCAAATTACAGTCAGTTGGATGAAGTGGATATGGGTATGACCTATGATGAACTTTCAGTGTATGGAAGGTTGCGCAAAATTTTCCGCTGTGGACCTCTATCAATGTTTAAGAATTTGTGTTACAAATGGGGTACAAAGTTGACGCCTGCAGAGGTGGCTGACAAAGTGAAATACTTCTTTAAATACTATTCCATCAATAGACACAAGATGACTGTACTGACGCCTTCATATCATGCTGAGAGTTATTCACCCGAGGACAATAGGTTTGATCTGCGCCAGTTCCTGTACAATGTCCGATGGCCTTATCAATTCTGCAAGAT | |||||||||
gi|261671992|gb|FS072855.1|FS072855 FS072855 library SmFL Solanum melongena cDNA clone SmFL10B18 3', mRNA sequence AGCCAGGGATGACTTGCCGAG EST sequence (targeted fragment marked with yellow): TAAGCGACAGGCAGATATCAACATATCTAGTTCCATGGTTCAGCACTCAGAGAGTGGTAGTTGGGGGACTTCTACCCAATCTGTTTCTGATGTGACAAGTATCTTCAGTGGCGATAACACGTTCCAGCAATCGGAATTCAGAGTCTCTGGCTTCCCTTTCCATATGCAGGAAGCTGAAGACTTCATGCATGTTGGAACCTAACAGCAAACCTGTGTTATCCAGGGTGGCGGTACCAATATACGTTACTGGTGCACACAAATGGATAATCGGCAGTTCATCCTTGGCTATTTTACTCTTACTTTTCCTGAATTGAACTCATTAACACTTTTTCTTAAGCTTTCGTTGTGGTATGGTGTATGGTTCCTGGTTAATGAGAAAAAGAACGCAGGTTGGTGCTGCACATCATCAAGAAGGGCAAGGAAAAAGAGTGAATTGTTCTTACTAAAAAAAATACTGGAGATTAAGGCTGTTTTCTCTTTTTCTTTGTCAAGCGTGTATGGATCATCTTGCACTTTTCAAGTCTGTGCTTATTACTGTTATTTGCATTTGTGGTTTTCATTTTTCTGTGCTATGTATTGTATCATTGTTAGTAAGTTTAACTCTGGCTTTGTGCAACAAGATGAACTTATTGAATCATTTTCATGCTTAGCACAAGACTTTTGTGGTTGTG | |||||||||