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mature miRNA: AGTCACTGCTTGCCATTGCAC
species: Solanum melongena
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|261645469|gb|FS026886.1|FS026886 FS026886 library MLF Solanum melongena cDNA clone MLF07I18 5', mRNA sequence

AGTCACTGCTTGCCATTGCAC
|||||||| ||.| |||| ||
TCAGTGACCAATGTTAACTTG

EST sequence (targeted fragment marked with yellow):
TAAGAAAAGAAAAACTAGAAAAAATGGAGTTCTCTGTATCACCAGTGGCACTGTCTTGTTTCTTTTTCTTGTTCCTAACAGGAACTTTAGCACAAAACATTGGTTCAATTGTAACCAGTGACTTGTTCGAACAGATGCTGAGTTTTAGGAACAATGATGCATGTCCTGCCAAGGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCCTTCCCAGCTTTTGGTACTACTGGTGATGATACAGCCCGTAAGAAAGAAATTGCTGCCTTTTTCGGTCAAACTTCTCACGAAACTAATGGTGGTGCAGCAGGAACATTTACTGGAGGATATTGCTTTGTTCGGCAAATAGACCAGTCAGACAGATACTATGGCAGAGGACCCATTCAGTTGACACACCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGCTAGTGAACAACCCTGATTTAGTAGCCACAGATGCAACAATCTCATTCAAAACAGCAATATGGTTCTGGATGACAGCACAGGACAATAAGCCATCATGCCATGCCGTTATCATCGGGCAATGGACACCATCCCC