| mature miRNA: GGCAAGTTGTCCCTGGCTATA species: Solanum melongena database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|261614161|gb|FS004442.1|FS004442 FS004442 library AE5 Solanum melongena cDNA clone AE501M16 5', mRNA sequence GGCAAGTTGTCCCTGGCTATA EST sequence (targeted fragment marked with yellow): AATCCCCTTCTTCCCCAATAATCCAGGGAAAGAACAACAAAAAATCAACCAATCATGGCAGCTCAGAGGTCCCATACTCTCACCATCTCCATACTTCTCATGCTCTTCTTCTCCACCTTATCCTCCGCCTCCGACATGTCCATCATAAGCTACGACGAAACTCATATTCACCGTCGTACCGACGATGAAGTCGCGGCGTTGTACGAGTCGTGGCTGATTGAACACGGCAAATCGTACAACGCCTTAGGTGAAAAGGATAAGAGATTCCAGATCTTCAAGGATAACTTGAAATACATAGACGAACAGAACTCTGTTCCGGATAAGAGTTATAAGCTCGGATTGACGAAATTCGCCGATCTGACTAATGAGGAGTACAGGTCGATTTACTTGGGTTACAAGAGTTCCGGTGACCGGAGGAGATTGTCGACGAAAGAAAGCGATCGGTATCTTCCTATAGTTGGGGATAACTTGCCGGAATCCATTGACTGGAGAGAAAAAGGTGTGCTTGTTGGTATTAAGGATCAAGGAGGCTGTGGGAGTTGTTGGGCATTCTCTGCCATTGCTTCCATTGAATCAA | |||||||||
gi|261627421|gb|FS062831.1|FS062831 FS062831 library SEP Solanum melongena cDNA clone SEP08H01 5', mRNA sequence GGCAAGTTGTCCCTGGCTATA EST sequence (targeted fragment marked with yellow): CGGCGTTGTACGAGTCGTGGCTGATTGAACACGGCAAATCGTACAACGCCTTAGGTGAAAAGGATAAGAGATTCCAGATCTTCAAGGATAACTTGAAATACATAGACGAACAGAACTCTGTTCCGGATAAGAGTTATAAGCTCGGATTGACGAAATTCGCCGATCTGACTAATGAGGAGTACAGGTCGATTTACTTGGGTTACAAGAGTTCCGGTGACCGGAGGAGATTGTCGACGAAAGAAAGCGATCGGTATCTTCCTAAAGTTGGGGATAACTTGCCGGAATCCATTGACTGGAGAGAAAAAGGTGTGCTTGTTGGTATTAAGGATCAAGGAGGCTGTG | |||||||||
gi|261661848|gb|FS064491.1|FS064491 FS064491 library SHT Solanum melongena cDNA clone SHT03F04 5', mRNA sequence GGCAAGTTGTCCCTGGCTATA EST sequence (targeted fragment marked with yellow): ATGAAAGTTATTTATTCAAAGAAAAGAAAATATTTGTATAATTTCTGTGTGGAAGGAAATTTACATGAAGAAATGGAGAATGGTTTGCAGCCAGGGATGACTTGCCGAGGTTCTCTTACAAATTATTCTATTAAGGATTTTGCGTCGGCAAGTTGTCCCTGGCTATATTTCGCTCTCTTCTTCTCATGCAAACTTCTTCACACCTATTTTTATTTTATTTATAG | |||||||||
gi|261674891|gb|FS084380.1|FS084380 FS084380 library SmFL Solanum melongena cDNA clone SmFL26M23 5', mRNA sequence GGCAAGTTGTCCCTGGCTATA EST sequence (targeted fragment marked with yellow): TCAAATGTATTGTAACTTCAGTTCAAAGCATCATCTTCTTATGATCTCCCCTTCCATTTCGTCCCATTTTCTTTCTTCTTCTAATTTTTGTTAACAGAGGTTGCGCGGTGACAATAGCAAAACCTCTACTCATTTTCTCCATCTCTTTCGATCTCCCTTCGCGCTTTCCGGCACTTGCCACTTAGCGAGCAATTCGAATTGGAAGATTTCTGCAGCTGAGTAGCTGGTGGATCTCTAGGATTCTTCATTCACTCTTAAAGTTTCTGATTTATTCCCTTTTTTTCGATAGAGTTTGCATTCTTCAGTGAAAATGCCTCTAAGGTTGGAGATTAAGAGGAAACTTGCTCAAAGATCAGAAAGAGTAAAGGCCGTGGATCTACATCCTACGGAGCCATGGATATTGACAAGTTTATATTCAGGGACAATTTGCATTTGGAACTATCAGACCCAGACAATGGCACAATCATTCGAGGTTTCTGAATTACCAGCAAGATCAGCTAAATTTATAGCACGCAAACAGTGGATTGTTGCTGGTTCCGATGACATGTTTATTCGTGTATACAATTATAATACCATGGATAAGGTCAAAGTATTCGAGGCCCACACAGATTATATTAGGTGTGTGGCTGTTCATCCTACTCTACCATATGTGCTGTCATCATCTGATGACATGCTTATAAAGCTGTGGGATTGGGAGAAGGGATGGGTATGCACTCAAATTTTCGAGGGTCATTCCCATTATGTGATGCAAGTCACATTTAATCCAAAAGACACCAATACTTTTGCTAGTGCATCTCTTGATCGGACTAT | |||||||||