| mature miRNA: TGCACTGCCTCTTCCCTGGCT species: Solanum melongena database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|261649391|gb|FS038690.1|FS038690 FS038690 library PER Solanum melongena cDNA clone PER02M04 5', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ACACACACAAACTCAGAAGTCTAATTAATTAATATAGAGTTGTTTTACTCTTAATTTGATACATTTAGTTGTTTTTAGTCAGGGAAGAAGCAGTGCAAAATGGAAATGAAAATGAAAGTGATGTTAATGTTGTGTATTGTGGTGATCATTCAAATTGGAGTGGCTCATGCTGCTGTGTACACCGTTGGTGGTTCTGGTGGCTGGACTTTCAATACCGATAGTTGGCCGAAGGGCAAGCGCTTTAGGGCCGGCGATATTCTTGTATTCAACTACGCGTCTGGTGCGCACAACGTGGTGGCAGTGAACAAAGCCGGATATAGCAGCTGCAGGACACCAAGGGGTGCCAAAGTGTACAACAAAGGGGGTGACAGAATCAAGCTAGTGAAGGGACAGAACTATTTCAT | |||||||||
gi|261640743|gb|FS037670.1|FS037670 FS037670 library PER Solanum melongena cDNA clone PER01B19 3', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ACATTTAGTTGTTTTTAGTCAGGGAAGAAGCAGTGCAAAATGGAAATGAAAATGAAAGTGATGTTAATGTTGTGTATTGTGGTGATCATTCAAATTGGAGTGGCTCATGCTGCTGTGTACACCGTTGGTGGTTCTGGTGGCTGGACTTTCAATACCGATAGTTGGCCGAAGGGCAAGCGCTTTAGGGCCGGCGATATTCTTGTATTCAACTACGCGTCTGGTGCGCACAACGTGGTGGCAGTGAACAAAGCCGGATATAGCAGCTGCAGGACACCAAGGGGTGCCAAAGTGTACAACAAAGGGGGTGACAGAATCAAGCTAGTGAAGGGACAGAACTATTTCATTTGCAATTTTCCTGGTCATTGTGAGTCTGGAATGAAGATTGCTGTCTCTGCCATGTGAAACTAAAGTAGCTAACTTATCCTACTGTTGCTATAATGTTTACTTAAAAAAGTCTTTTAAAACGTTCTATGATGTCAGCTGTGTTGGTGTACTAGTACTACTACGATATAATATTTATGGCAAATAATGGATTAATATGAACTTTTTGCTACTTCC | |||||||||
gi|261721853|gb|FS070706.1|FS070706 FS070706 library SmFL Solanum melongena cDNA clone SmFL06N18 5', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ACTCAGAATTAAGTATACCATCTCTCTACTTTTTTTATTCATCAAAAAAATGGGAAAATTTCTGGCTGGGATTTTTTTGTTCATGTGTTGTGTTGTCCCAAGTTTGGCCAAAGATTACACTGTTGGAGACTCAGCTGGGTGGGGACTTGGTGTGGATTATGGCACTTGGGCAAGTGGAAAAACTTTTAATGTTGGTGATTCACTTGTTTTCAACTATCCAAGTGGTCACACAGTGGATGAAGTAAGTTCCAGTGACTATAAATCATGCGGTACCGGTAATTCCATATCGTCCGACAGTAGCGGCGCCACCACTGTCCCACTCAAGACCGCCGGCACTCATTACTTCATTTGCGGCGTAATGAGCCACTGCAGCGGCGGCATGAAGATCTCCGTCACCGTGGCGGCAGCCTCCGGCGGCGGGGGCGGTGGTTCCACCACACCATCACCGGACACCACCACACCATCAACCGGCACCACCACACCTTCCACCGCCACCACCACCCCCAAACCTGACACTAGCACCACCACCACTACTACTAGACATCCATCGGGATCAGTAACTTTGTCACCTTTTATCCCTTTTTTGATTTCTGGGGTGGTTGCAATATTTAGTTATTTTGTTACTATTTAATAAGCTTAAGCCAGGATAGAGGCAGTGCCCCCACGTTGTGACCATTTTTTTTCTTTTAGTATTTGCTTTGCTTTTTGTAAGTTGTGATTTCTTGGCATGTTATGATGACTTATTTGTTACAATACTCCTTTCGTTTCATTTACTTGCAGTCAA | |||||||||