| mature miRNA: TCCCAAATGTATACAAAGGA species: Solanum tuberosum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|71037092|gb|DR751752.1|DR751752 02-F09 suppression subtractive hybridization library of Phytophthora infestans-challenged lea TCCCAAATGTATACAAAGGA EST sequence (targeted fragment marked with yellow): ACCATGAATCGCGAGTGCAGCAGGAGCAGCTGCCCATAGCCAGTAGTTTGTTGCTTTCTTGCGCTTTAGTATAGATTTGGGAAGCTCAGACCCTCTTGCGCGTGTTGCTCTGTGCCTGATGGTGTTATCTTTCCGTGCCTTGACCTTGGGTGCAACGGCTGTTTCAACAGTCTCCTCTGCATTTTCTTCCTCAGCAATTTCCTCGGGTGTTTCAGTTGGTTCCTCGGTTGGTTCCTGACCAGCAGCAGAAGATCCACCCTTCTTCTTTGCTTTCTTCTCACGTTCC | |||||||||
gi|78749063|gb|DV625466.1|DV625466 95815.1 Cold Sweetening C Solanum tuberosum cDNA clone 95815 5', mRNA sequence TCCCAAATGTATACAAAGGA EST sequence (targeted fragment marked with yellow): CGCACATCTACCAGCAACACATTTATGAGTTTTCCATCCTAAACTATATAGGATGCAAGAAAAAAGAAATATTGTTATGATCAAACTAAACAGTACTTGCTATTGCAGTATTGTAAAAAAAGACACTAAAGCCAAAGTTTTTGTTTTTTGTTTTGTTTTCACTCTCCACTCTCCCCCACCTCTTTCTACTTTTGAAGATACATGTATCCGATGACTAGAAGTACCAGAATCGCGAGTGCAGCAGGAGCAGCTGCCCATAGCCAGTAGTTTGTTGCTTTCTTGCGCTTTAGTATAGATTTGGGAAGCTCGGAGCCTCTTGCGCGTGTTGCTCTGTGCCTGATGGTGTTATCTTTCCGTGCCTTGACCTTGGGTGCAACGGTTGCTTCAACAGTCTCCTCTGCATTTTCTTCCTCAGCAATTTCCTCGGGTGTTTCAGTTGGTTCCTCGGTTGGTTCCTGACCAGCAGCAGAAGATCCACCCTTCTTCTTTGCTTTCTTCTCACGTTCCTTGAGCTTCTTTTCAGCTTCTAGCTGAGCTTTCTTTGCAGCTTTTGCAGCTGCTTTCTCGGCCAACTTACGCTTCCTCTCCATAGCCTGTTTATTTTTTGCTATCTCCTCCTCTTTCTTCATTTCCTTCAGTGTAGCCTCATCAACTTCAGTTTTCTTGGGCTTAATATCCTTGGGTAGGTCCAAACCATAGATTTCCTCATCATCAACAACGACAGCTTTTTTCTCTGTGCTTTTTGTGTTTTACCATGAGCATCATTCAGCTGCTTGCCA | |||||||||