| mature miRNA: TCTTGCCTACACCGCCCAT species: Solanum tuberosum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|115275479|gb|EG013715.1|EG013715 SDBN005J23u SDBN Solanum tuberosum cDNA clone SDBN005J23, mRNA sequence TCTTGCCTACACCGCCCAT EST sequence (targeted fragment marked with yellow): CTGATGAATGTAGATAGATATCATATTCACTAAACTACGTCTCAGTCCTAAACAAATTGAAACATGACTATATCACTAACTTACTTCCCTGAGTTTGAAAAAAAAAGAAATCGCAATACAGAGAAAGGAGAGATCATGAACTTCTGCGAATTTCCTTCTGCGTATATACCTCACGGGACCCTTCATCATCTATCTCTTTGAGAAATGTGTTCTCAAGTATAGAGTTCACACGAATAATGAGGTCATCATTTCCAAAGCTTTGTTGCTCCTCTCGTATTTGCTTGAGAATGCGCATGTCTTCCCATTGTAGGTGTGTTCTGCACAATGTCAACTTCTTGAGGTGTGGTGGGAAATTGTCACACTGTGGGATGTGTAGCCAAGAAAGGTCCACCCAATCTTTGCTCTCCAGCCTAAGATAGAGCAGAAAATTCACTCGGAACTCAACTTTGAGCTTCTCACGCTGAGATAAATGTGCAAGATATTCTCGACAATAACACTCCTGAATAGTGTCTGAGTCATCAACAATTAAAATTCCCAACTTCTTCAAATTTGGAATTCTTAGAAACACCTCATCGCTAC | |||||||||
gi|115272984|gb|EG011220.1|EG011220 SSBT005H04x SSBT Solanum tuberosum cDNA clone SSBT005H04, mRNA sequence TCTTGCCTACACCGCCCAT EST sequence (targeted fragment marked with yellow): GGGGATATAACAAACAAGCTAAAACAACAAACTAAACATGTCTCCTTCATGGCCTAGTACTACACTTCTTGCCTCTCTCTTTCTTTTCTCCCAAATATTTTCTTGCATTGCTCAAGTTCCAGCTGAAAACACCTTTAAATTCGTCAATGAAGGCGAATTAGGAGATTATGTTGTAGAATACAAAGCAGATTATCGCGTTATTAGTATTTTCAATAACCCATTTCAGCTCTGTTTCTACAACACAACTCCTAATGCATGGACATTAGCATTGCGAATGGGCACTGTCCGTTCTGAATCACTCATGCGTTGGGTGTGGGAAGCAAATAGGGGAAACCCTGTTAAAGAAAATGCGACATTCACGTTTGGAACTAACGGAAATCTCGTATTGGCGGATGCTGACGGTCGAATCGCTTGGCAGACCAACACGGCCAATAAGGGGGTCACCGGGTTCAAGTTGTTACCTAATGGTAACATGGTGCTACATGACTCCAAGGGTAAATTCGTCTGACAGAGTTTCAACTATCCCACTGATACATTACTAGTGGGCCAAACTCTCCGATTGTCTGGCCCGAATAAGCTTGTGAGCCGGGCCTCGGTGAAAAAGAATGCGAACGGGCCTTATAGCTTGGTGGTGCAGGCAAGATTGTTCGCTGTCTAC | |||||||||