| mature miRNA: TGCCAAAGGAGAGCTGCCCT species: Solanum tuberosum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|126635994|gb|EL732282.1|EL732282 TDF 4-13-3 potato ESTs differentially expressed after Phytophthora infestans-challenge or DL TGCCAAAGGAGAGCTGCCCT EST sequence (targeted fragment marked with yellow): GAGCGCATAAGCATCAAGAGTTTATTGGGCGTCTCTCCTTTGGGACAACAAACACAATTCACAAATATCAACAAATTCATCATAAGAGATCAATTTTAGTCGAGCTCCATTAAGTTTTAGTAAATGAAAAAACAGAAACAAAGAGAGGAAAATTGTGGCAGATAGGATAGGTTTCAAAGAAATTGTGAATTTGATTGACCTTTCAACTTTACTGTGTAGCCT | |||||||||
gi|78750041|gb|DV626444.1|DV626444 96907.1 Cold Sweetening C Solanum tuberosum cDNA clone 96907 5', mRNA sequence TGCCAAAGGAGA-GCTGCCCT EST sequence (targeted fragment marked with yellow): AAATCATCTTTATCATGCTTATGCCTGGCTCAAGCTTTTCTCTCTTCAGAAGGGTTTTAATAAAAATTTAAGCCAGAAGGATTTGCAGTTAATAGCATCGTCTGTTGTCCTAGCTGCACTTTCAGTGCCTCCTTATGATCAGTCTTATGGTGCATCTCATCTTGAGCTTGAAAATGAGAAGGAGAGGAGTTTGAGGGTGGCCAATCTAATTGGTTTTGAAGTTGAACCCAAAGCCGAAAACAGAGTGGTGCTTTCTCGATCATCACTTCTCTCAGAGTTGGTGTCCAAAGGTGTGATGTCCTGTGTCACTCAAGAAGTGAAAGATCTTTATCATCTGTTAGAAAATGAGTTTCTTCCTTTGGATCTGGCACTGAAGGTGCAGCCCATATTGAATAAAATATCAAAGCTTGGTGGTAAGCTGTCTTCAGTTTCTTCGGTTCCTGAAGTACAACTGTCTCAGTATGTTCCTGCCTTAGAAAAGCTTGCTACTCTGAGGTTGCTCCAGCAGGTCTCTCAGGTGTATCAGACAATCCAGATTGATAACATATCTAAGATGATCCCATTCTTCGACTTTACCGCTATTGAGAAAATATCAGTTGATGCAGTTAGGCGTAAATTTTCTAGCCATCAAAGTTGATCACATGAAGGGTGGCGTCTTCTTTGGCAAACAGAGTATTGAAAGCTGAAAGGACTCCGGGATCATCCTGTTCTCTTTTGGCTGAGATCCCCTTAGCCAAGGCCAAGGGACCAATGATTCTTATTCCCCGCAGCGAAAGAAAGCGGGCCACGACTCCGGGGGAATGCCCCGTGTCTTCAATATTTGCCCACACATATTCGGGGGAAGAGAGGCCCCCAAAAAATACTTTTGGCGGAGGACCCCATTTTGAAAGACACGCAAGAGGGACACAAACGGGTTTTCTCTCTTTAAAAT | |||||||||