| mature miRNA: TTGACAGAAGATAGAGAGCAC species: Solanum tuberosum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|160518277|gb|AM907209.1|AM907209 AM907209 Solanum tuberosum cv. Yungay leaf adult Solanum tuberosum cDNA clone 10H12, mRNA se TTGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): GATATCGAATTCCATCAGGCAGAGGACGAGACAGAACGCAGAAAATGGCGCTCGACGACGACGATGGTGGCCTCTCAAGACTCCGGACGCCGCCATCGACGCAGTTACAGCTAGCGGTGCAGCACAACCGATACAGACAGCTCCTGCGCACGTTCCTCTCGTGGAAACGGCATGCGCAGACGCAGCGTGAGCGACGAAAACGAGTCGCCACTGCTTGTCTAGTGGGCTCCATCTTCTGTCAGCGAGAATACTGGTCGAGATGGAGGGCTTTTGTGGCCGTGAGACGTCAACTAAAGCTGGAGGAAGGACGGGAACACGAAAAGGAATCACTACTGGAGAAAGATCTGGACAACGGCGACTGTATTCGTTTTGATAAACAAGTAACGAGTGCAGCGTTAACTTCCGATGGAGGAGACAGTGAC | |||||||||
gi|78748824|gb|DV625227.1|DV625227 95541.1 Cold Sweetening C Solanum tuberosum cDNA clone 95541 5', mRNA sequence TTGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): AGTGGATCCCGCGCTGCAGGCTAAATCCATGGAGAAAAATGATGACTTTTTGGTAATTCCACTAGTGAAAATGCTAAGAAAAAAATCATTACAACAAATAATAATAACAACTAGAAATTATCATCATCATCAAATTCTTCTTCTTCTTCTTCACTAATAAGAAGTTGTCAAGCTGAGAAATGTAATGTTGATTTAAGTGATGCTAAGCAATACCATAAGAGGCATAATGTCTGTGAATATCATGCTAAAGCTCAAGTCGTCGTCGTCGCTGGACTCCGCCAACGTTTCTGTCAGCAATGCAGCCGATTTCATGAGCTAACGGAATTTGATGAATCGAAAAGGAGTTGCCGGGAGACGTTCGGCTGGACACAAGGAAAGGCGAAGAAAGAGTACATCGGCGTCATCGTCTTCATCATCTACAGATCAGTCTCATAGAATTCATATATCTATCCAAGAAAATTCAAGTTCACAAAAATTTCCACCTACGTTGACTAAAATGCATATCCTATTTAATAAATTTGCTCTCTCTCTTCTGTCATAAATCTGTTTCTAAGATAATATTCATCATTCACATACCATCCCG | |||||||||
gi|66839148|gb|DR037253.1|DR037253 48828.2 Late Blight-Challenged Tubers Solanum tuberosum cDNA clone 48828 3', mRNA sequence TTGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): GTTGATTCTGATCGTGCTCTCTCTCTTCTGTCATCAGCACCCGCTGTAACTAGGGAGATTGGTTTGAGTCACATGCTGCAGCAGCCTGCCTCTATCCCGCGTTCCCAGTCACAGGGCCTGCAGTATGATGGTCTAAGCCATTTCCCTTTTGCTCAAGATTTCAATAGCAAACCTCAAGATTCACATGTTAGCAACAGCAGCAGCCCTCTCCATTTCCATGATATGTTGCAAAATGCACAAGATGGATCATCTACAAGTGGTGGCTCTCAGCAAACACTAGCCTTTATGTGGGACTAAACTTTTAACATCAAGGATATTCCGTTAATCTTGAATCCATCCAACCACATGGTATTCCATTTCAGAATGTTTAGCTTCTAATTAGAGTCGAATGTTTGTGTGATATATCACTTTTC | |||||||||
gi|115277633|gb|EG015874.1|EG015874 SSBN002B03u SSBN Solanum tuberosum cDNA clone SSBN002B03, mRNA sequence TTGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): GCTCGAGCGGCCGCTCAGCTATCTGGTATTATACAACCGATCACATATGAATGGTATAGACAGTCAAAACTCGTTCCCTGGTTCTTCGGGTCATAGCTATACAGGAGGAAGCCAATTCCAGTTCATGCAAGGCAGTGATCATAGTCTGACTGAATCTTCTTCAATCTGCCAGCCACTTTTTGAACATCCCACTTCTGCAGCAGGAATTTCTAGCAGCGGACAAAAGATCTTCTCCAGTGGATTAAATGATATTGTTGATTCTGATCGTGCTCTCTCTCTTCTGTCATCAGCACCCGCTGTAACTAGGGAGATTGGTTTGAGTCACATGGTGCAGCAGCCTGCCTCTATCCCGCGTTCCCAGTCACAGGGCCTGCAGTATGATGGTCTAAGCCATTTCCCTTTTGCTCAAGATTTCAATAGCAAACCTCAAGATTCACACGTTAGCAACAGCAGCAGCCCTCTCCATTTCCATGATATGTTGCAAAATGCACAAGATGGATCATCTACAAGTGGTGGCTCTCAGCAAACACTAGCCTTTATGTGGGACTAAACTTTTAGCATCAAGGATATTCCGTTAATCTTGAATCCATCCAACCAAATGGTATTCCATTCCAGAATGTTTAGCTTCTAATTAGAGTCGAATGTTTGTGTGATATATCACTTAACTTTTCTATATTTTCC | |||||||||