| mature miRNA: TGTGTTCTCAGGTCGCCCCTG species: Taraxacum kok-saghyz database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|68260841|gb|DR401597.1|DR401597 TKN073B11_630716 Taraxacum kok-saghyz root cDNA library Taraxacum kok-saghyz cDNA clone TKN07 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCTTACAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTTAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGCCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAAAATTCACTATTATCGATAAGCAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCATGCGGTATCATTGGATTACAGGGTTGATTGTCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACTTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTGCGTTTTTTTTAATAAAGTATTCCCTTTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAAT | |||||||||
gi|294684764|gb|GO670226.1|GO670226 TKN083F05 Taraxacum kok-saghyz root cDNA library (TKN) Taraxacum kok-saghyz cDNA clone TKN08 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ACTCTCACATTCTTACAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTCAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGCCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATGAAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAAAATTCACTATTATCGATAAACAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCATGCGGTATCATTGGATTACAGGGTTGATTGTCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACTTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTGCGTTTTTTTTAATAAAGTATTCCCTGTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAATTGAGACATGTTTTATATGCCATT | |||||||||
gi|294704369|gb|GO672139.1|GO672139 TKN104G04 Taraxacum kok-saghyz root cDNA library (TKN) Taraxacum kok-saghyz cDNA clone TKN10 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ACTCTCACATTCTTACAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTCAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGTCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATGAAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAAAATTCACTATTATCGATAAACAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCATGCGGTATCATTGGATTACAGGGTTGATTGCCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACGTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTGCGTTTTTTTTAATAAAGTATTCCCTGTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAATTGAGACATGTTTTATATGCCATTTCTTATTCCCAT | |||||||||
gi|294703950|gb|GO671746.1|GO671746 TKN100E09 Taraxacum kok-saghyz root cDNA library (TKN) Taraxacum kok-saghyz cDNA clone TKN10 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ACTCTCACATTCTTACAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTCAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGCCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATGAAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAAAATTCACTATTATCGATAAACAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCATGCGGTATCATTGGATTACAGGGTTGATTGTCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACTTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTGCGTTTTTTTTAATAAAGTATTCCCTGTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAATTGAGACATGTTTTATATGCCATTTCTTATTCACAAAAAAAAAAAAAAAAAAAGGCCGCCTCGGCCTCT | |||||||||
gi|294694566|gb|GO663275.1|GO663275 TKN005B10 Taraxacum kok-saghyz root cDNA library (TKN) Taraxacum kok-saghyz cDNA clone TKN00 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCTCACATTCTTACAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTTAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGCCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATGAAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAGAATTCACTATTATCGATAAACAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCACGCGGTATCATTGGATTACAGGGTTGATTGTCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACTTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTACGTTTTTTTTAATAAAGTATTCCCTGTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAATTGCAAAAAAAAAAAAA | |||||||||
gi|68258547|gb|DR399303.1|DR399303 TKN100E09_635590 Taraxacum kok-saghyz root cDNA library Taraxacum kok-saghyz cDNA clone TKN10 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ACTCTCACATTCTTACAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTCAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGCCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATGAAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAAAATTCACTATTATCGATAAACAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCATGCGGTATCATTGGATTACAGGGTTGATTGTCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACTTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTGCGTTTTTTTTAATAAAGTATTCCCTGTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAATTGAGACATGTTTTATATGCCATTTCTTATTCAC | |||||||||
gi|68261743|gb|DR402499.1|DR402499 TKN083F05_632520 Taraxacum kok-saghyz root cDNA library Taraxacum kok-saghyz cDNA clone TKN08 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCTTACAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTCAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGCCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATGAAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAAAATTCACTATTATCGATAAACAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCATGCGGTATCATTGGATTACAGGGTTGATTGTCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACTTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTGCGTTTTTTTTAATAAAGTATTCCCTGTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAATTGAGACATGTTTTATATGCCATTT | |||||||||
gi|294695289|gb|GO669338.1|GO669338 TKN073B11 Taraxacum kok-saghyz root cDNA library (TKN) Taraxacum kok-saghyz cDNA clone TKN07 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCTTAAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTTAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGCCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAAAATTCACTATTATCGATAAGCAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCATGCGGTATCATTGGATTACAGGGTTGATTGTCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACTTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTGCGTTTTTTTTAATAAAGTATTCCCTTTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAATTGAGACATGTTTTATATGCCCTTTCTTATTCCCTAAAAAAAAAAAAAAAAAAA | |||||||||
gi|294687715|gb|GO660687.1|GO660687 TKR002F02 Taraxacum kok-saghyz root cDNA library (TKR) Taraxacum kok-saghyz cDNA clone TKR00 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGTCCGGAATTCCCGGGATCACAATCCTCCACAGCAAAAAAACTCAATAGTGTTTTAGAGAGAGAAACAGGGGCGACCTGAGAATATTCATATTTTAAAGAACACATCACAAAGAATGGCTGGAATGATGAAGACATGTATGGTGATGTTTACGGTGATGATGGTTGCATCCATGATGCAAACCTCCGTAGCTCAGACTAGACATGTCGTCGGAGACGCCTTGGGCTGGACCATTCCTCCTAATGGCGCCGCCGCTTACACAACCTGGGCTTCCCAGCAGACCTTCACCGTCGGTGACTCTCTTGTTTTCAACTTCACCACCGGGATGCATAACGTGGCGGAAGTATCACAAGCGGCGTATGGCCCATGCACCACCACCAACCCGATCTCCATTACCCCCACTGGCCCCGCCACCCTCACCTTGACGGCCCCCGGCACCCACTACTACATTTGCACCGTCGGAACACATTGCCAAATCGGACAGAAGTTGACCATCACCGTTGCCGCCGCAGCCGCTGCACCTACCACCCCACCTCCAGCAGCTGCACCCACCACCCCTCCTCCAGCAGCCACCCCCACCCCCACCCCCACTACCTCACCAACACCCGCACCGGTTTCTCCACCAACCACCACCCCAACCCCAGCCCCCGCCCCTTCCGCTACCACCACATCACCTACCTCCTCCCCCGCACCTTCTCCAGTTGGAGCCAGCCCACCATCGCCTCCTACATCCGGGCCATCTCCTTC | |||||||||
gi|68258900|gb|DR399656.1|DR399656 TKN104G04_636296 Taraxacum kok-saghyz root cDNA library Taraxacum kok-saghyz cDNA clone TKN10 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCTTACAGACGCTTTGCAGGGGTTATCTGAGATCACATATAAAAATGAAGGCAGTTGCAGTTCTCAACAGCAGTGAGGGTGTTAGTGGCACCATCCTCTTTGAACAAGTGAAAGAAGAGGATCCCACAACTGTTACTGGAAACCTTTCTGGCCTTAAACCCGGACCTCATGGTTTCCATGTTCATGCCCTTGGTGACACCACCAACGGATGCATGTCAACTGGTCCTCATTACAATCCTCATGGAAAGGAACATGGTGCTCCTGATGAAGAGGTTCGCCATGCTGGCGATCTTGGAAATGTTACAGTAGGCGAAGATGGTACTGCAAAATTCACTATTATCGATAAACAGATTCCACTAATTGGATCTCAATCCATCATTGGAAGGGCTGTAGTTGTCCATGCTGATGCTGATGATCTTGGAAAGGGTGGCCATGAGCTAAGCAAAACCACTGGAAATGCTGGTGGAAGGGTTGCATGCGGTATCATTGGATTACAGGGTTGATTGCCTACTGCTTATCTGTATGCCAGGGAAATATTGAGGATTACGTTCTTGAGAACATAGATACATTTACATGTTTACATATTTCCCCGAAATCTGTGATTGTGGTAGTATTGCGTTTTTTTTAATAAAGTATTCCCTGTGCTATTTGAATACTTGGATATCTTTTGAGTGTGTTTTTGAATTGAGACATGTTTTATATGCCATTTCTTATTCCCA | |||||||||