| mature miRNA: TACTCCCTCCGTCCCAAATTA species: Taraxacum officinale database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|90338811|gb|DY836449.1|DY836449 CTOZ3206.b2_L09.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOZ3206, mRNA sequenc TACTCCCTCCGTCCCAAATTA EST sequence (targeted fragment marked with yellow): CATTTTGGGACAACCAAAAAGGAAAGATGGACTATCATTTTGGGACGGAGGGAGTATGAAATTTGTTTCCATTGTTGCAGGAGGTTATATCTGAAACCCACATAGTCCTCAACACCCTTTTTAGGTTTCCATGAATCAATCGTCACAACATGAGAGAGAAACAGAAACAGAAACAAGGGATGACGGGAGTAGTTATGTCACTAACTTTGTCTACTAGTGGTTTATGTAAGACATTTGTGTAATGGTATTTTATAAAACATTTGTGTAATGGTCTTTTGTTTGACATTTGTGTATTGGTTTTTTATAAGACATTTATGTAATGGTCTTTTGTAAGATATTTGTGTAATGGTTTTT | |||||||||
gi|90317478|gb|DY826845.1|DY826845 CTOY2464.b1_P15.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOY2464, mRNA sequenc TACTCCCTCCGTCCCAAATTA EST sequence (targeted fragment marked with yellow): GTTTTCCATTTCTTTGTTGAAAATTCCCCACCTTCAACTTTTTTCCATTTCTAATTCAATCTTAGAGAGAATTCACACAACAACTAACATTTTACATAGATTACGAGAGTCTATATAGAGGGTATACAACGGAGTTTAAACCATCACGATGGTTTTGTGTAACCGTTGCAAGTTGCTACCCTTGAAGCCACAATATCATTAGTTAACTTCCAATCTTGTAATGGTTATACCCATCTTTTCTTTAAATGACACTTATTAGACAGTCTGGGTTAATATTTCAACAATTCTTATCGTTAACACGGGATTGAAGCAGACTATTCATCTTCTTTGCATCACCATGATATCTTGTTTGCAAGCAAAGCATAGATAAGGAGTTATCAAAGAAGCTTCATTGGATTTGCTGCCTATCTCTCAAAGAGGAAAAACAAAAGTTGGCTGGGAAGTTTCAGTGACCAAAGACTATTATTTTGGGACGGAGGGAGTATTATAATGAAGACGTTTGGAGTTTTGGTTATCTTAGTGATCATGGTCACCCTGATAGTGGGTAGAGTACATTCACAATCAAGGAATTGTGACATTGTTGACGTTGAGGATTGTGGTACGTCAATTACATACACTAACATCCTACCAACTGCAAAGTGTTGTGATGAACTCAGACAACATAGAAGTTGTCTTTGTTATTACACAAGTCAATACTTCAGCGCGAGTGCCGTTATCAGTAATTGTCATATCGATTTCAGCGAAGTTTGTCCGTCCTTATCTAAATAGCTAATGCACTAAGCCGTAAAAGCCATATATATGAAGGATATATAATTGCCTTTTTTCTTTAAGACAATATATGTATGTTATGGTTCATGTTTTCTTGTGAATAATATTAGTTTGATA | |||||||||
gi|90321350|gb|DY830717.1|DY830717 CTOY6279.b1_N09.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOY6279, mRNA sequenc TACTCCCTCCGTCCCAAATTA EST sequence (targeted fragment marked with yellow): TTATTTGGAATCATTCAAATTATCGNCTTCTCAAATACCCAATTTCCATAGTACAAAATGGCTCTCAATTACTGCTGCAGTTACATCCTTCATGTATTCCGTCATTGGATCGGGACTTGGGTTAGCTAAAACACTAGGAAATGGAAAAATTGAAGGTAGCATAGGAGGAGTTCCAAATGATAAACCAATTCAGAAAATATGGTTGGTTGCTCAAGCTATTGGAGACATCGCGTTTGCCTATCCTTTTCACTTGGTCTTTTTTGAAATAATGAGTACTTTGAAATCACCTCCACTCAAAGAAATCACCATGAAGAAGGCCTCAAGAATCGCGGTTTTTACCACTACTGTTTTTTACCTCTGTTGTGGTGGATTTGGGTATGCGGCATTTGGGAACTCGACTCCCGGGAATATCTTGACAGGGTTTGGATTTTACGAGCCGTATTGGCTCATCGATTTTGCTAATGCATGTGTTTTTCTTCACTTAATTGGAGGATATCAGAAGTGGACTATCATTTTGGGACAAACCAAAAAGGAAAGATGGACTATCATTTTGGGACGGAGGGAGTATATGATAAGGGAGATGTCCACATAAACATGTGCTATAAAGATATTTAGTCAGACGTTATACGCGATAGTGGAAAAATGGTATGCTGAAAAGCACCCTAGAAGTGAACTCATGAACGATATTGACATTTTGGAGATTAGGTTTAAACCTCTTCGATTATGTCTTAGAACATCATATGTGGTTTTTACAACAACCATAGCAATGGTGTTTCCTTATTTCAATGAAGTGGTGGCATTTGCGGGGTCCGTGACTTTCTGGGCATTGGTTTACTTCCCGATTGAGATGTATTTTGTACA | |||||||||
gi|90253959|gb|DY809476.1|DY809476 CTOX17993.b1_B12.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOX17993, mRNA seque TACTCCCTCCGTCCCAAATTA EST sequence (targeted fragment marked with yellow): GCGGGGCACAGAAGATCAAATATCATACTCATGGCTGGGAAAGTGTTTGCTAGTGTTAAATTCATCTTACTGTTGTCCTTTCTTTCAGTTGGGACTTTGAGATCAGTTCATGCACAGAAAACTTGGTGTGTGGCGAAGCCATCGTCCAGCCTTGCGACTCTTTTAACAAATATAAATTTTGCATGCTCACAAGTGGACTGCGGTTGCTTGCAAAAGGGTGCGGTTTGTTCGACACCTGACAACATATTCAATCATGCTTCAGTAGCCATGAACTTGTACTACCAGTCTAAAGGAAGAAACGCTTGGAATTGTCACTTTGGAAACTCTGGTCTAATTACAGTTAGTGATCCAAGTTATGGAGGCTGTATGTATGCTTAGATTATCTACATGAAGTTAGAGATCTACTATGACTTATGAGGAATAGCTGCTTATTAATTACTCCCTCCGTCCCAAATTAATAGTCCACTTTTGACTTTTCAAAGTCTTATTCTTTCAACTTTGACCACATATAATATTGTTTATACTATACTCCGTATAATTTTTGATACAAAATATATAAATAGATTATGTTTTACATGTAAATTTTTATTGGTATAAGTTTCATTAAAAATTATATAACACAAAAAAAATTATTTATGGTCAAAGTTGAATAAACAAGACTTCAAAAAGTCCAAACTGAACTATTAATTTGGGACGGAGGTAGTATGATTTATCGGTTATTGAATCAAAGTTGTAGCCTTTATATATAGAAAGTTGTCTTGTAGTTTAGTCCATTTTGGTACTTGTAATTTCATGATGTAATGTTTGTTGCCAATATGTCTTTTTTATCGCCTGTC | |||||||||
gi|90280607|gb|DY820248.1|DY820248 CTOY12197.b1_J02.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOY12197, mRNA seque TACTCCCTCCGTCCCAAATTA EST sequence (targeted fragment marked with yellow): TTCACGCACGCAACAACACAGTCGCACAGGGGTAGGTCACCATCTTCTCTCGATTTCAAATTGAAGCAGCCGACCTCCGCATCCTCGCATCTCGGCGTCGCATCTCCCCTTCGCATCTCCTTCACTGTTTGAGTGCACCGCAGCAGCAGGCCACCGACACCGGAGGTGGATCTATCGAAGAGTGCACCTGTAGCTTCAGAGCTGTTTGAGTATCAGACAATTGAAGGGTTTCATTCAGACATGGAATTCATTGTTACTGACTCGGAATCGTACCACCGCAGCAGCACACCAGCAACACCGCAGATGGAGGTAAACGATCCACCGATTGTTGACGATGGAGATGATGAAGAAGTTGCTAGAAAATGATTAACAACCCATGGTTTTAAACCCAAACCCAAATCCCATGGGTTGAACCCAAGAACCCATAAAACCGTGAAACCGTCCCATGAAACCGTGAAACCGAACCCATTGCGAACCCATTGGGTTGGGTTCTGAAAAACAGAAACCGATCGGTCGGTTTTACGGGTTGGGTTTACCCCAAAACCGACCAAACTCTACCCATGCTCAGCCCTAAATTATTTTGCATCATATATTATATTACAAAAATAAAAATTGAATGTCAAAGTTGCGAAAGAAAGACTTGAAAATTCAAACATGGACAACTAAATTGGGACGGAGGGAGTACTATTTTCGATTTTATAATAAAAAAAAATTATTTCCATAGATAACTAACGAATATGCAGAACTCCACTCTACAGTCTTTACGAACTCGACTTATTTGGTCTCTATGATTA | |||||||||
gi|90338927|gb|DY836565.1|DY836565 CTOZ3324.b2_G16.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOZ3324, mRNA sequenc TACTCCCTCCGTCCCAAATTA EST sequence (targeted fragment marked with yellow): CATTTTGGGACAAACCAAAAAGGAAAGATGGACTATCATTTTGGGACGGAGGGAGTATGAAATTTGTTTCCATTGTTGCAGGAGGTTATATCTGAAACCCACATAGTCCTCAACACCCTTTTTAGGTTTCCATGAATCAATCGTCACAACATGAGAGAGAAACAGAAACAGAAACAAGGGATGACGGGAGTAGTTATGTCACTAACTTTGTCTACTAGTGGTTTATGTAAGACATTTGTGTAATGGTATTTTATAAAACATTTGTGTAATGGTCTTTTGTTTGACATTTGTGTATTGGTTTTTTATAAGACATTTATGTAATGGTCTTTTGTAAGATATTTGTGTAATGGTTTTTTG | |||||||||