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mature miRNA: TTATTTTGGGACGGAGGGAGT
species: Taraxacum officinale
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|90315950|gb|DY825350.1|DY825350 CTOY16911.b1_M03.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOY16911, mRNA seque 

TTATTTTGGGACGGAGGGAGT
|.|||||||||||||||||||
AGTAAAACCCTGCCTCCCTCA

EST sequence (targeted fragment marked with yellow):
CACGATCCTAGAGCCCCATAATATATCTTAGAAGTCTGCCGTTCACAACAACACTCAAGCTACCGGATTGGTTATGGGAACAGAAGTTGATCGCGACTATGGAAAGAAGGTTGAGGAATCCATTAGATTACTAATAGAAGGTGAATCAGCAAGAACGTATAGTTCCAAGCAAGCTAATGTCACAATTTGTATGGTACCTAATACACTTCGAAATCTCAACCCACTTGCCTATACACCTCGAGTCACCTCAGTTGGTCCTCTTCACAAAGAGGCCCAACATCTAAGAGCTATGGAAGAGCACAAAGTGACTTACATGTATCGACTATTTTGTCGAACCGTGGAATCCACGAACAAGGACATAGAGCAAATAACTTGTACATGTGTCCAAGCCGTGCTTGGGCTTCTAACACGTGTAAAAGCTTGCTATGCACCATGTTCTACAATCTATGATGATTTTATGCTAGCAGAAATGATGGTTATTGATGGTTGTTTCATACTTGAGCTTCTCTGTAGGTTCGAGTATGGAATTGGAGAAGGTGATCCAATTTTTGACAATATTCTAGTGCTACGCGACATTAAACACGACTTGCTACTACTAGAGAATCAAATGCCTTTCTTTGTTCTTGAGATATTGTTCAGGATCACTATGAAACGAATGAAGTCCACTTCATTAACCGACCTTGTCTTTTATTTCTTCAAGGATATGAGTATCTTGAATAATACTCCCTCCGTCCCAAAATGATAGTCCATATTTCCTTTTTGGTTTGTCCCAAAATGATAGTCCACTTCTAAAAATAAATAACCATTTTACCAAAATGTCCTCATCATTAATGTATCAATCAATATATTAATAATGGTATTAAATGTAAAGTAAGGGCAAAAAA


gi|90317984|gb|DY827351.1|DY827351 CTOY3084.b1_G03.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOY3084, mRNA sequenc 

TTATTTTGGGACGGAGGGAGT
|||||||| |||||| | |.|
AATAAAACACTGCCTGCATTA

EST sequence (targeted fragment marked with yellow):
TCGAAGATTGTATACTATGAAGCCGCCCTCACTGTCTTATGTTCTCCTACCTTCTCTTCATAATTACTACACCGTCATCAATTTCTTCTAAGGGTGGTCATATAGCATAAGACTCTGAAGGGAAGAAGGTCTTAAATAATGTTCGCTACCACATAGGCCCAGTCATCCCGGCCAATGGCGGTCGAATCCAGTTAGCCCACACCATGGCCCCTTTTAAAGTTTGTCCATTCAACGTGGTGCAGGACCCATCTAAGGATACCTTAGGTGGCCAATTCATGTTCACTCTCATTGGCAAATTCGATGACAAATATCTCCACACTGATAGCATTCTCGGTATCGATTCCGGGTATCCCAAGGGTGAATGTGAGAAGTCGACATTTTGGACGATTCCTGATGTTGAAGAACCGGCGCCTTCTAACTTGATTTCAACTGGCGGAGGTTTCGATGATTATATTACATGTTTTCAGATTGTGGAGTATCCTAAACCAACTAGTCCAAAAGTTCCTAGCTACATGCTTCACCATTGTCCCTCGTTTTGTGGTGCGGGTCCTCAAGCTTGTTTTAATATAAGTATTTATTTGGATAATGGGGTTAGACGACTTGGTCCTACTGGTGGTGTTCCTTTCGAGTTTGCGTTTTATGAGGTCAAAACAACCAATATGTGATTTACATTACGTCCGTCACAAAATAAGGAGTATGTAGGAGTCAATATGGAACTTATTCCAATTAATGAGACTCCGTGCAAATAAAAGAATCTATGGTTGTACTTCAGTGATATTTGAAATGTAAGTTGGCCTTTTCATCAATCACCA


gi|90329915|gb|DY833649.1|DY833649 CTOY9576.b1_P18.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOY9576, mRNA sequenc 

TTATTTTGGGACGGAGGGAGT
|||||||| |||||| | |.|
AATAAAACACTGCCTGCATTA

EST sequence (targeted fragment marked with yellow):
AGCGAACATTAGTTTGGATACTATGTCCGCCGCCCGCCCTGTCCTATGTGCTCCTACGTCGCTGCATAAGTGCAACGCCGACCTCTATTTCTTCGACGGAGGAGCACATAGGACAGGACGCGCGGGGGCAAAAGGTCCTAACTACTGTTCGCTGCCACATGGGGCCAGTCGTCCCGGCCCGTGGCGGCCGAATCCAGGGAGCCCACCCCAGGCCCCCTTTAAAGTTTGNCCATTCAACGTGGTGCAGGACCCATCTAAGGATACCTTAGGTGGCCAATTCATGTTCACTCTCATTGGCAAATTCGATGACAAATATCTCCACACTGATAGCATTCTCGGTATCGATTCCGGGTATCCCAAGGGTGAATGTGAGAAGTCGACATTTTGGACGATTCCTGATGTTGAAGAACCGGCGCCTTCTAACTTGATTTCAACTGGCGGAGGTTTCGATGATTATATTACATGTTTTCAGATTGTGGAGTATCCTAAACCAACTAGTCCAAAAGTTCCTAGCTACATGCTTCAACATTGTCCCTCGTTTTGTGGTGCGGGTCCTCAAGCTTGTTTTAATATAAGTATTTATTTGGATAATGGGGTTAGACGACTTGGTCCTACTGGTGGTGTTCCTTTCGAGTTTGCGTTTTATGAGTCAAAACAACCAATATGTGATTTACATTACGTCCGTCACAAAATAAGGAGTATGTAGGAGTCAATATGGAACTTATTCCAATTAATGATACTCCGTGCAAATAAAAGAAGCTATGGTTGTACTTCAGTGATATTTGAAATGTAAGTTGG


gi|90253959|gb|DY809476.1|DY809476 CTOX17993.b1_B12.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOX17993, mRNA seque 

TTATTTTGGGACGGAGGGAGT
||| |||||||||||||||||
AATTAAACCCTGCCTCCCTCA

EST sequence (targeted fragment marked with yellow):
GCGGGGCACAGAAGATCAAATATCATACTCATGGCTGGGAAAGTGTTTGCTAGTGTTAAATTCATCTTACTGTTGTCCTTTCTTTCAGTTGGGACTTTGAGATCAGTTCATGCACAGAAAACTTGGTGTGTGGCGAAGCCATCGTCCAGCCTTGCGACTCTTTTAACAAATATAAATTTTGCATGCTCACAAGTGGACTGCGGTTGCTTGCAAAAGGGTGCGGTTTGTTCGACACCTGACAACATATTCAATCATGCTTCAGTAGCCATGAACTTGTACTACCAGTCTAAAGGAAGAAACGCTTGGAATTGTCACTTTGGAAACTCTGGTCTAATTACAGTTAGTGATCCAAGTTATGGAGGCTGTATGTATGCTTAGATTATCTACATGAAGTTAGAGATCTACTATGACTTATGAGGAATAGCTGCTTATTAATTACTCCCTCCGTCCCAAATTAATAGTCCACTTTTGACTTTTCAAAGTCTTATTCTTTCAACTTTGACCACATATAATATTGTTTATACTATACTCCGTATAATTTTTGATACAAAATATATAAATAGATTATGTTTTACATGTAAATTTTTATTGGTATAAGTTTCATTAAAAATTATATAACACAAAAAAAATTATTTATGGTCAAAGTTGAATAAACAAGACTTCAAAAAGTCCAAACTGAACTATTAATTTGGGACGGAGGTAGTATGATTTATCGGTTATTGAATCAAAGTTGTAGCCTTTATATATAGAAAGTTGTCTTGTAGTTTAGTCCATTTTGGTACTTGTAATTTCATGATGTAATGTTTGTTGCCAATATGTCTTTTTTATCGCCTGTC