miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: AACCAACGAGACCAACTGCGGCGG
species: Triticum aestivum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|222363811|gb|GH723815.1|GH723815 AZO4.105M19R011122 AZO4 Triticum aestivum cDNA clone AZO4105M19, mRNA sequence

AACCAACGAGACCAACTGCGGCGG
|||||| |||||||||||||||||
TTGGTTACTCTGGTTGACGCCGCC

EST sequence (targeted fragment marked with yellow):
GCCAGGAAACAATAATTTTCTATAGTATTGACAAAGCAAGAAAACAATCTTAGCCATTCAAGCTGAAGAACGATAGATACCGCACTTCCATTACCAGAAATATTCATTTATATAGTTACCAAAAAATATGCAAGCTATGTCTGTATCAGACACACATACAGTATAACACTTCAATGACTGAGGGGTAAATTGTGAGCTAGCAATGCAATCATGGAACACTGACATATAGTTATTCATTAACACATTGTGGCTACACTCTTGAAAAGTTGAAACGAACCAAACATAAAAAAAAGGAACAGACAAAATCAGAAAGACCAGAGCAGGATCTATAAAATCTTCAAGGCAAACAATCATTGCCTACAACATACTCCCTCCATTCCATAATGTAGTGCTTCCTCTATCCACGTGCTTCAACTTTGACCGTAAATTTAACTACCAAGACCGATTGCGGCGGAAGCAAAAATTATATCAGTGAATTCGTATTCGAAAGAAGTTTTCAATTATATAATTTTTTCTCCCGCCGCAGTTGGTCTCATTGGTTAAATTTATGGTCAAAGTTGGACCTCCGGAAGCGCGGGCGCACTATATTTTGGAACGGAGGGAGTATGACACAGCACAGTGTTATATTGGTTTCGGTTTAATACGATAGCCATCTCACAAAATGGCACCTGGATAGGTAATATTTGGCTGATTACTGAAGC