| mature miRNA: ATGTGACGCATGTTGTTTTTC species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|222370695|gb|GH727746.1|GH727746 G550.127O18R010920 G550 Triticum aestivum cDNA clone G550127O18, mRNA sequence ATGTGACGCATGTTGTTTTTC EST sequence (targeted fragment marked with yellow): GGGCACGGCAAAATGATATGCATCACATACATCAGTCACAAATCAACAAAATGCAGCATCACTGTCAACCAAGGCGCCACGCCAAATTCATAGGATACATGTCACTAAGTAAGTCTCTCCTAAAGATTCAAACAAATTACAAGCTGAAACAACATACGGGACGACAGAAACAAAGAACAAAAAGAATTAGCATGCATGGCACCAGCAGGGTACATAGCACAATACTACATGCAAACCAAACATATCCATCTGCAGTCAGGAGGTACACGTGCAAAACCATACAGGGAAGGCGGGGCCACTAAGAACATAAGAGGGAGATCTTGACCGGATCACTTGCCATACAGTACACCCAAAATAATAGCCACCAAGAGAAGCACAATCATGACCAGCATAGGCATTCTGTACATTGATTTCTCCAGATCATAACCCCTTCTCTTCAGCAGGCCGGATGACTTGCAAGTTTTCTTTATGGCATCCACACGCCTCCGGGTCAGCGCAGCATTTGGGTCGTTATCATCAATCTTCGACTCTAGCAATGAAAAGAATTCATAAAAAGCAAAATAGACATCTGATTTCGATTTGGTCTCATCAATTACCCGTGCAGGGAGCCCACGCCTCATCTTAACACCTCCTCTAAAGACTTTCACATTATTGTAAGCAAATAGCAAAGGTCCCAATTGCCATTATCTGAAAAGAAAAACAGTTGAAAAATATGTGGTAAATAAGGTTGTTTCAAAATTAAATGGAAGATCCATACTTCACAAAAAAGGGAAGTCAAATCAAAAACCCCCACACGGTTACTTAGGTTTAAAAATGTATTGAATTTGATAAAAATGGTAAAAAAAAAAAAATATCAAATTTTCAAATATGGACGCGGG | |||||||||
gi|222366816|gb|GH727162.1|GH727162 G356.106M03R011023 G356 Triticum aestivum cDNA clone G356106M03, mRNA sequence ATGTGACGCATGTTGTTTTTC EST sequence (targeted fragment marked with yellow): CAGAACTCAAGTTCATATGGTTACAGGGACATACACAAAGGGATGTGTGTTATACATTAGTAGGGTAGTGTATGGATGATCTATGGCACTGAAAACTCCAACATTTCTTCTTATGTACTGTACTAGATTTACAACAAAAACAGGTATTGGGAACAACAATATGTGTCACGCATCGGAGAGCGAGATGATGGCTTCAGTCGAAATGGTCGGCGGAGAAGTCGGGCTCGTCGGGCTTCTGCAGCCTGCGGATCATGGTGTCGTCGGCACGGAACCTCCTGGACGCGGAGGCGAACTTGTGCATCTCGGCGGCGGTCCTGGAGGTGCCCTCCTGCTGGGGCTTGTCGGCGGCCGGGTGCTCCTCGGACCACCACGAGTAGGACTCCCACCGGCTGAGGCTCTCCGACAGCTTCCTCCGCTGGTGCTGCCGCCACGCCGCCGGGATGAAGCAGGCGCCCCACGTCCTCCAGGGGGGGGAGTAGAACCGGAACGTGTGCTGGAGCTTCTGGCTGGGGAGCCGCCGGAACAGGTTCGCCACGAACTGGAGGTCCTCGGCGCGCAGCGCGAAGGCCTCCACCTCCGTCAGGCTCCGGACGGTCCTCGGGGAGAGCGGGAAGGGATGTAGTCTAGGGCAAAAGGGCCCAGGAGAACAGATCCTCCCCGGAGAATAAACCGGGGCGCAGGAGAAAGGAGAAAAAAAAAAGGAACCGGCCCCCGAAGGACGAGGAGATCTCAAATAGCCGGAAAAAAAAAAACATCTAGCTAAAAGGTCGCCCCGGGGG | |||||||||
gi|194717954|gb|FK934488.1|FK934488 TaRDZ71 Triticum aestivum root (China Agricultural University) Triticum aestivum cDNA, mRNA ATGTGACGCATGT-TGTTTTTC EST sequence (targeted fragment marked with yellow): TCCTTTGATCTCCTGCATAATCATTTCATGAAGCTATAAAATTGCACATAGGTTCCAAGTCAGTAGAAATATAGACATGCGTCACATGTCTAATGTCTCAAAGCTTTTGTATTAGCTAGCTTACG | |||||||||
gi|239862407|gb|GR304792.1|GR304792 WRIS_5520 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis ATGTGACGCATGTTGTTTTTC EST sequence (targeted fragment marked with yellow): TGTTGGTACCCGGGATTCGGCCATTACGGCCGGGGAGTACTATTATGAAGAAATTCAGACCTCGAGCTCGAGGACGTAGTTTCCCCATAAAAAAAAGCATGTGTCATATAACAATTGTACTAAATATAGTAAAGAAATCTTAAGATTTCGATTCCCAGTAAAAAAAATATAGAATAGAAAAATATGGGACAAAAAATAAATCCACTCGGTTTCAGACTTGGTACAACCCAAAAACACCATTCCTTTTGGTTCGCACAACCAAAAAATTATTCGGAAGGTCTACAGGAAGATAAAAAAATAAGGGATTGTATCAAGAACTATATACAAAAGAATAGGAAAAAGGGCTCGAATAGAAAAATAGAATCAGACTCAAGTTCCGAAGTAATTACACATAATAGAAAAATGGACTCAGGTTCAAGTTCCGAAGTAATTACACATATAG | |||||||||