| mature miRNA: CACTACATTATGGAATGGAGGGA species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|143800764|gb|CJ966685.1|CJ966685 CJ966685 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul4p15 CACTACATTATGGAATGGAGGGA EST sequence (targeted fragment marked with yellow): AGCGGAATCGAAGAATTAGCAATGGTGGACATGTGGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATTCCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTCGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTATGAGGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCGTTCACCTTCTACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGACTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGAGAGGCCCGCGGTGCAGAGGGTCTGCAAGCATATGCCTACGGAGTTTAAGCTAGGTGCACAGTACTAGATGTTTCTCCGCGCGAGTGTGTGCCGTGCCGTGCCGGTGATGATTCCATTCAAGAGAAGAGACCTCCCGTGGGTGGGTGATCATCTGCCCGTCTAGTTCGTTCGTGTATACGCTTTCAGTTTCAGCAGCACGAGGAGTCCGCTTGCGCTTCTGTTCGTGCGAGCCTGGATTCCTTGCTTTAAGTTGTGCACTAGTACTCCCTCCGTTCCATAATATAGTGTCTATAGATTTTTGCAAAAGTCAAACATTACAAACTTTGACCATATTTATAGAAAAAAGTAGGTACATCTAGAATAGCAAAT | |||||||||
gi|143800501|gb|CJ966422.1|CJ966422 CJ966422 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul4c04 CACTACATTATGGAATGGAGGGA EST sequence (targeted fragment marked with yellow): CAAGATGGCGATCTCGTCCTGTTCGAGTCGCGCGCCATCGCCAAGTACATCCTCCGCAAGTACGGGGGGACAGCCGGCCTCGACCTCCTCGGAGAAAACAGCGGAATCGAAGAATTAGCAATGGTGGACATGTGGACGGAGGTGGAGGCCCAGCAGTACTACCCGGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCATTCCCTTCATCATTCCTGGCGGTGGCGCGGCGCCGAACCAGACCGTCGTCGACGAGAGCCTGGAGCGGCTGAGGGGTGTGCTGGGGATCTATGAGGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCTGAACCACATCCCGTTCACCTTCTACTTCATGACCACCCCGTACGCCAAGGTGTTTGATGACTACCCCAAGGTGAAGGCCTGGTGGGAGATGCTCATGGAGAGGCCCGCGGTGCAGAGGGTCTGCAAGCATATGCCTACGGAGTTTAAGCTAGGTGCACAGTACTAGATGTTTCTCCGCGCGAGTGTGTGCCGTGCCGTGCCGGTGATGATTCCATTCAAGAGAAGAGACCTCCCGTGGGTGGGTGATCATCTGCCCGTCTAGTTCGTTCGTGTATACGCTTTCAGTTTCAGCAGCACGAGGAGTCCGCTTGCGCTTCTGTTCGTGCGAGCCTGGATTCCTTGCTTTAAGTTGTGCACTAGTACTCCCTCCGTTCCATAATATAGTGTCTATAGATTTTGCAAAAGTCAAACA | |||||||||
gi|222363811|gb|GH723815.1|GH723815 AZO4.105M19R011122 AZO4 Triticum aestivum cDNA clone AZO4105M19, mRNA sequence CACTACATTATGGAATGGAGGGA EST sequence (targeted fragment marked with yellow): GCCAGGAAACAATAATTTTCTATAGTATTGACAAAGCAAGAAAACAATCTTAGCCATTCAAGCTGAAGAACGATAGATACCGCACTTCCATTACCAGAAATATTCATTTATATAGTTACCAAAAAATATGCAAGCTATGTCTGTATCAGACACACATACAGTATAACACTTCAATGACTGAGGGGTAAATTGTGAGCTAGCAATGCAATCATGGAACACTGACATATAGTTATTCATTAACACATTGTGGCTACACTCTTGAAAAGTTGAAACGAACCAAACATAAAAAAAAGGAACAGACAAAATCAGAAAGACCAGAGCAGGATCTATAAAATCTTCAAGGCAAACAATCATTGCCTACAACATACTCCCTCCATTCCATAATGTAGTGCTTCCTCTATCCACGTGCTTCAACTTTGACCGTAAATTTAACTACCAAGACCGATTGCGGCGGAAGCAAAAATTATATCAGTGAATTCGTATTCGAAAGAAGTTTTCAATTATATAATTTTTTCTCCCGCCGCAGTTGGTCTCATTGGTTAAATTTATGGTCAAAGTTGGACCTCCGGAAGCGCGGGCGCACTATATTTTGGAACGGAGGGAGTATGACACAGCACAGTGTTATATTGGTTTCGGTTTAATACGATAGCCATCTCACAAAATGGCACCTGGATAGGTAATATTTGGCTGATTACTGAAGC | |||||||||