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mature miRNA: GAGCTGCTGGAGCTTTTCCAC
species: Triticum aestivum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|222369029|gb|GH730397.1|GH730397 G750.115K23R010802 G750 Triticum aestivum cDNA clone G750115K23, mRNA sequence

GAGCTGCTGGAGCTTTTCCAC
|||||||||||| |.. ||||
CTCGACGACCTCAAGGCGGTG

EST sequence (targeted fragment marked with yellow):
ATTATTTTTTATTTTTTTCTGGCTGCATCCAACAACCAAGCCAGGGCAGAAAGCATAATATCCAGGTAGTGACAGGTTTACTGTTTATTTCTTAATACAAAACTACATTACTGGGAGCTTAACAAGTCAGATTCACTGGCTGCTAGATTCGTCATGCTCTGGCTGCATCTGGTTCAGCACAAAAGCTCCCTCGAGGTTTTTATGCACCTCAGCTTTCATTTTCTCCTCCTGGGTCCCTCTCTTCAGTTTCATGAGGATATCAAACTGGGCGAAGTCTTCAACCACCTCAGCCTGGGCGCGAACGATTTCAACAAGTTCATATGGGAGAAGGGAATTCGACCTCTGCTGGATTGATTTCACAGCATGGCTTGCAGCATCTTTGACTACAGGATCATGCACAGGCACATCACGCCATCCAGGCTCATGTCCACCTCTCTAGGCGCCGAGGTCGGAGATGGAGAAGGAGGGGGCGTCCCCGGGGTGGCGGAACTCCAGCAGCTCCTAGAAGTCGAGCCACGGCTTGACCCAGACCTAGGCCTCGTACACCTTCTTCCGCCCGGCCTCAAGCGCCTCAAGCGTGAGGG