| mature miRNA: GTGCGACAAGTAATTCGGAAC species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|222363274|gb|GH724796.1|GH724796 F1.113E01F010531 F1 Triticum aestivum cDNA clone F1113E01, mRNA sequence GTGCGACAAGTAATTCGGAAC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGCTGATGCTGAAATTTACGATTATGCAAAACAGATGGTTTCTTCATGTCGTGGGTTACCTAGAGCCATATGTGCCATTGGCAAAGGTGTTGCTCGAGTGACTTGTGGTGGTAAGAATCTATTTGCTTGGCAGTTCGCCTACAAGCAAAGCATGGGCAGAAATCTACATCCCGAGCAAATGGAAGAACTAGCGTTTGTTCTGATTTAGGCAACTTGTGCGTGGCTCCTAGGAGCTGTGGAGACTTGGTTGGACTTCATTTCTTGTTGCTGCCGCAATGAAGTGTTGGAAGAGTCCAGATGGCGGCAGTTTGATGCTTACCTGTGAATATGGTGTGATATGTTTGATGATATTACTTTCTAGTACTCTCTTCGTTCGGAATTACTTGTCGCAGAAATGGATGTATCTAGACGTATTTTAATTCTAGATACATCCATTTCCGAGACAAGTAATTCCGAACGGGGGGAGTATGCGATAACTTGACTTGTCAGTCTTCTGATGCCCCTAAACATAGGGCAAAACACCTTCATGCTCCAATGGAATGCAAGAGGAAAACCGGAC | |||||||||
gi|222360763|gb|GH721374.1|GH721374 AZO1.102O03R010611 AZO1 Triticum aestivum cDNA clone AZO1102O03, mRNA sequence GTGCGACAAGTAATTCGGAAC EST sequence (targeted fragment marked with yellow): CTAGAGCGNGCGCCCTGTTTTTTGTTGTTTTGTATGTTTTGTTTTGTTTGTTTTCTCGGTACCACTTTTCTGCATGGCATCAAGGGCCAGTCCCATCCCAGTCCCAGGGATAAGCAGCGCGGCCAAATCAAAATGAATGGATACCGCAAGTCCAGTTCAGTCAGTTCAACAAAACCAAACCATACCCATACTAGCTAGCTACACATGCTGCTAACTACTACTCCCTCCGTTCGGAATTACTGGTCGCAGAAATGAATGTATCTAGACGTATTTTAATAGGTAGACAGTAGATACTATGTACAGACACACACACAGATAGCAACAAGATAAAATCACTGACTCCCTCCAACTAGACCATCAACCAACCAGCATGTAGATTATATTCTCCTGCTATGCCTCCAAGAGCTCTCTCACACTCTGGTTCCCAATCATCTAGGGTTTCCAAGACCATTATATGGCTTCCTCTCACCAACACTCCACCAAAAAAACGCCTTGTTCAGGAAGCAGGCGGCAACTCAAAGCCTCGATGCACAAGCCAGGGCACGTAGATTATATTAATTATTGAGAATACTCCTTATACCACTCAAAGGTGCATGGCCCTCTCATGACTCTCCGATGTCACGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGG | |||||||||
gi|222366960|gb|GH727865.1|GH727865 G608.107M17F010905 G608 Triticum aestivum cDNA clone G608107M17, mRNA sequence GTGCGACAAGTAATTCGGAAC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGGAAATCTGGTGGTGCAACTTTCATGGTAAGAGGTGGCACTACTTTTGATGATTCTTATTAATGTACTCCCTCCGTTCGGAATTACTTGTCGCAGAAATGGATGTATCTAGACATATTTTAGTTCTACATACATCCATTTTCGAGACAAATAATTCCAAACGGAGGGAGTAGCTTGGAAGGAATAAGTCAGGGGGAAAACAAGACTTGGGCTAAACCTATCTGAACTTGTTCGTTCTGCAGGTGGAAGGGTCTACCGTTGTCGCGGCACTTCAGTAGGAGATTCTCTCGTCTCCGTCGCTGGGCAAAGCAGGCAAGGCCGTTCTCCTGTATATGGTGGTGGTGTAATATAATGCAACAAGGCGCGTGTGCTACTCTCTTTGTGATCTTATGTGAACTGTTCGGTTGTGTATCTGATCATCTGTATCTCTAGCTGTTCAAATTCTCGCAGTGGATTCAAGACCGGCCGTCTTCAGTTGGATGTAACAATTAATGTAGTAGCAACCAAATAAGCTTTCTTTCTTTCCATCTAAAAAAAGGCTTTCTCG | |||||||||
gi|143798361|gb|CJ964284.1|CJ964284 CJ964284 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul35b2 GTGCGACAAGTAATTCGGAAC EST sequence (targeted fragment marked with yellow): CTGGACTGCTGGCGCAAGATCTACAGAGCGGAGGGGGTCAGGTCGTTCTACCGGGGCGCGCTGTCTAACATGTTCCGGAGCACCGGCGCGGCTGCCATACTCGTGCTGTACGACGAGGTGAAGAAGTTCATGAACGGGGGTAGGTTGTGATAGGTATAGAGGAAGTGTGTGGTTCTCCACAGATTTTGGGGTTCCGGCATGGAGATTAGACACGACCAGACGGTACACGGAGCAGCAGCGGCGGCGGCTCGAATCAAGCGTTTTGTTTGTACTCCCTCCGTTCNGAATTACCTGTCGCACGTATGGATGTATCTAGATGTATTTTAGTTTTAGATACATCCATTTCANCGACGAGTAATTTGAAATGGAGGGAGTAGTAGGCGAGTACTGGTTTCCTGCTGTTCGCCACTAACCAAACCAACCAACCAGTAGCAAGGGCT | |||||||||
gi|143798062|gb|CJ963985.1|CJ963985 CJ963985 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul34b2 GTGCGACAAGTAATTCGGAAC EST sequence (targeted fragment marked with yellow): CTGGACTGCTGGCGCAAGATCTACAGAGCGGAGGGGGTCAGGTCGTTCTACCGGGGCGCGCTGTCTAACATGTTCCGGAGCACCGGCGCGGCTGCCATACTCGTGCTGTACGACGAGGTGAAGAAGTTCATGAACGGGGGTAGGTTGTGATAGGTATAGAGGAAGTGTGTGGTTCTCCACAGATTTTGGGGTTCCGGCATGGAGATTAGACACGACCAGACGGTACACGGAGCAGCAGCGGCGGCGGCTCGAATCAAGCGTTTTGTTTGTACTCCCTCCGTTCCGAATTACCTGTCGCACGTATGGATGTATCTAGATGTATTTTAGTTTTAGATACATCCATTTCAGCGACGAGTAATTTGAAATGGAGGGAGTAGTAGGCGAGTACTGGTTTCCTGCTGTTCGCCACTAACCAAACCAACCAACCAGTAGCAAGGGC | |||||||||
gi|143794430|gb|CJ960358.1|CJ960358 CJ960358 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul22n2 GTGCGACAAGTAATTCGGAAC EST sequence (targeted fragment marked with yellow): GTGTCAATCCAGTGGCGCTCATGAATGCTTCCTGAGCTCATGGTTCAGTGTGACCTGTCTGTCATTAATTGCTTTAGATCACTGTATGTTCTTTTTCGCAACGGAGGAAATTCTTCACTTTTACCCAGTATGATAATTGACATTGGCTAGTAGGTTCATACTGTTCTCTTAATCAAAATTGCAAAAGAGCAACCGGAAAAATGAAGAAATTGTTCAATCTATCCAGTATGAATCCATTATTGCACTCATGGCTGAAGATCAGACATCTTATGTACACATCTACACAATAGTGTTTCTAACTTTATTATTTACATTTGGTAGGATGATGCCGTTCCTAATCCTCTCAGGACAGCTTTGCCCGCCTGGAATCGAGGGCACACTGTTTGCTCTGTTCATGTCCATTAACAACCTCAGTTCGACATTAGGTTCATTCCTTGGAGCTGCATTGACGTCAGCTTTGAACATCTCGTCGGTACAGTTTGACAATCTGGCGCTTGGCCTAGCTGTTCAGCTGATGGGAACTCTCTTACCTATTGGATTTTTGTTTCTGATTCCAAGGGACGTTACAGGACTAACATCGGGTTACAGACCTGATCATCATTTTTTCTGGACTGGTCTGGTCTGTATTCCCTAGTCTTACTCATACATGCATATAGAGAAAGCAAATTGAAGCCAGCAGGAAGGTAGCTCAGTTTTGTTGAAATATGTATACAGCCATATACTCCCTTTGTTCTGAATTACTTGTCGCAGGTATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTCTGTGACGAGTAATTTGGAACGGAGGGAGTACTAGAATGAGAGGAAGAGTACAATAGCTGACATTATAAAGCGTTAAGCAATGGCGAAACTGTGTAGCAAATGTACTTGCGCGAAACATGTGTTANCATGGAAAGTGT | |||||||||
gi|222362143|gb|GH723990.1|GH723990 G468.100A19R010928 G468 Triticum aestivum cDNA clone G468100A19, mRNA sequence GTGCGACAAGTAATTCGGAAC EST sequence (targeted fragment marked with yellow): AGAGAGAGAGAGACCATCGCCGTCGTCGCCGCTCCCCATTCACCGGAGCAGTCTGGAAGCTCATCGCAGAGGACGAGTGCATGAGCATCGCCGCCCCCACCCTACCAGAATGGTGGCACCGGCTTGCCTGGGTTACAAGAAGGGGGAATGAACCAGCCAGGTAGAAGAGCAGGGTCGAAGACAGCGTTGGGCTGACACTAAAACATGCAGTCAAGGAGGCGTTCGGTTGCCATCTACAGCATTTACTCCCTCCGTTCGGAATTACTTGTCGTAGAAATGGATGTATCTAGATGTATGTTAGTTCTAGATACATCCATATCCGAGACAAGTAATTCGGAATAGAGGGAGTACATCACAAGCCGGCATGGAAACTATCACGTCCCCCAAAACGATCAATCGTCACGGCAAAGCCGTTCCATTCAATTCCTGCTTAATCGGGCATGGTCCGGGTGGTGATCGTTAGGTTAGGCGCGGCGATGAGGAGGATAGGCGCGCGGTCAGTCGCTCGGCTCCGCGTGCTACAGCCTGTAC | |||||||||