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mature miRNA: TAGATACATCAGTATCTAGAC
species: Triticum aestivum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|239862695|gb|GR305080.1|GR305080 WRIS_865 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis)

TAGATACATCAGTATCTAGAC
||||||||.|| |||||.||
ATCTATGTGGTACTAGATTTG

EST sequence (targeted fragment marked with yellow):
GAACACAAGAAAATGTTCATCTGATACTACGAGAGAAGATAACAGCAGAACTAGGTAGAGAAGGGGGATTATCTACAAATTCAGCAGGAATCAACATTACTGGATCATTAGAATTGAAAGTTTCTTCCGAGAGTGAAAATACTAAGATCTGGTTAAGTTTAGATCATGGTGTATCTAAAGGATCAATCTCAAATAATGATCTCCAATTTAAAACTCATCCAAACGTCGATAAAAAGGCTTGGTCTGATAATAAGATTATTAAATTGAAAGATTCTGATCGTGGATTTCCTACTAAACAAGGCTTGGCTGTTTTAAAATGGAGATTAAATTCTAAAGATGAAACTTTAATTCCTATATCTATTAATTGTTGGCCTACTACTAATGATGATGGAGGATGTGATGTGAACATTGAATACGAAGCAGAGAATGAGAATGTGAAATTACACAACCTAGTGATATCGATTCCTTTGCCGGAAGGATCTTATCCGAAAGTAATTTCATGTGATGGAACATACG



gi|222364583|gb|GH725603.1|GH725603 G118.115N20F010719 G118 Triticum aestivum cDNA clone G118115N20, mRNA sequence

TAGATACATCAGTATCTAGAC
||.||||||||||||||||||
ATTTATGTAGTCATAGATCTG

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGCCCACGCGTCCGCTTGTGAGATCGCTTTGTTTACTACATAGTACCTTTTACTCGATCTTTCCAAGCACAATGAAATATTGAAATTGCATCTGTTCTATTCCCTGTTGGTAGGACCAGGATGTTACCCCTTTATATACATGAAATTTGATCCAAGTTGGGATTTCAAGTGAGCAATGCCCGATTATGTTTTAGTAGTTAAAGTATCTTATTCTCTTGGCGCACTATAATGTTTACTCCTGAGCTTAGACTGCAAGGGTTTAATGTTATGTTTCATTTGTTGATCTGATGTTCCCAATTTCAGGTCTGCATGTTGTGGTCATAATGTTCACAGGTTATTTGGTGGGATCTGCTACTTTCAAAGCTCTGTTTGGCAACAGTCCTGTAATGAATGCTGCTGGAGGCATCTTAGGAGTGGTGGGTGGCATGCTGATGGAAACAGTTCTTTTCATCATCAGATCATCCAGTAAAGAGTTGTCGTCTTCGGTTCCAAGATCCAAGAAGCTTCAGTAGACGCTGATCCGCTTTGATNTTTCATGTGTACTTTACCTTGCGAAACGGTAGTATGTGAAGTTCTGGATCGTTCAGATGTACTCCCTCCGTCCCNAAATTCTTGTATTAGATNTGTCTAGATACTGATGTATTTAACACTAAAACGTAACTAAGGTATGTCTAGTATGTAAGGAAA