| mature miRNA: TAGATACATCCGTATCTAGA species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|222366865|gb|GH727822.1|GH727822 G608.104N01F010904 G608 Triticum aestivum cDNA clone G608104N01, mRNA sequence TAGATACATCCGTATCTAGA EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGCACCTGTAGCTGTTTCAGATGCCGCAATGCTCGCTCCCGAAGAAGTTTTTGAAGGGAAAGGGGATATTAAAGAAGACGTGGAGCTTACACAAGCTGAGCGCAAAAGAAGAAGAGCCAACAAGAAGAGGAGATATGCAGGTATTTTTTTTCTCTTTGGGGTTTCACTCGCCTCGACGGCTTTTGAAAAATCCTCCCAAGAAACAATGAATCCTGCTCTCTACTTCATCACCAGGGTAGTTCATGGTTGTATTCAGTTGTATTACTCCCTCCATTCCTAAATATAAGTCTTTCTAGAGATTTCACTATGGACTACATACGGATGTATATAGACGTAGTTTAGAGTGTAGATTCACTCATTTTACTCGGTATGTAGTCTCTTATTGGAATCTCTAAAAAGACTTGTAGTATTTAGGAACGGAGGGAGTAGTATATTGGAAGATTTGGAGCAGCGCAATCTCACACATGGACTGAATTGTGTTGGCAACATGACAAAAACCTGCTACTTTGCCATGCAGAATCGCACAAGGAGAGGCCAGCCAAGCTGCGGAAAGAGAACTCATCAAATATATAGGAAGCTGCTGCTTACATGCTATATGTATTGCAAACCTTTGGAGTTGTTGGAGGGAGGACCCCACAACAGTGTAATGCCTTCGGATCTG | |||||||||
gi|222367349|gb|GH731872.1|GH731872 OV.002G19F010109 OV Triticum aestivum cDNA clone OV002G19, mRNA sequence TAGATACATCCGTATCTAGA EST sequence (targeted fragment marked with yellow): ATGCAACTAACCGTGATCGCCTTTTGGTTTGATAGGGTTTACCACTTCAGTAGTTAGTTAGATTTTTCTATTGTGGTACCATTTACATGGACACTAGTACTAATCCTAGTTCTTAGATTGCAGAGTACCCCTTATATCTTTGTATATGTGCAGCTCCTGCCCATGGAAATCATGTAGAATGGTACTCCCTGTGTCCCAAAATTCTTGTCTTAGATTAGTCTAGATACGGATGTATCTAATACTAAAACGTGACTTGATACTTCCGTATTTGGACAAATCTAAGACAAGAATTTTGGGACGGAGGGAGTATATGTGGACCATCCTGTTATGGTTTATTTTACCATGATATTACTAAAATGTTGTACTTTAGTGGCATGTTCTACATTTAGACAGCTAATGTTACCTGGC | |||||||||
gi|143798908|gb|CJ964829.1|CJ964829 CJ964829 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul36n1 TAGATACATCCGTATCTAGA EST sequence (targeted fragment marked with yellow): CCATAGTTNTTTCAGAAGAAGCCTGGAGGAGAACCTGAACAGCAGGAGTTGACATATGCTAGCCTGCAGGAAGCTATTTCTGTGCCCTGGAAGAATCTGCCCAAGAAAACANCTAAATTGTACTACGCCATGAGAGTCTNGGAAAGTTATGAATTATCTGAAGGGCGCAATCCTGGTGAGACAGGACTTTNTGATCTACCTGCAGTTTTGGCTTGGAGGAAGGATATGTGTGATAGAANGTCTTTAAGTGAGTCTCAAATTCNTACGGCTCTCCTGGAACGGCTTTTAGCAGCTGGAAAGAAGGAACATCCTCCTGTATGTGCAATCCTTGGTGGCATTCTTGGTCAGGAGGTGATTAAGTCAATATCTTGTAAGGGCGATCCGATCAAGAATTTCTTTTATTACGACGCAGCTGATGGTAAAGGGATCATGGAGGACATCCCCCCAACTCCCGTAGAGCATTTTGCATGATGTCTAGCTCGCATTGGTCATTAATCGCTGATTATTGTACCCAATCATTAGAGCCGAACATGTGACAACTTCTTATCATGGCTGCGGCAGAAAACTCATGTTACCTCCGTTCCATTTTTTTCTNGTCTAGATATGGATATATCTAACACTCGAACGTGACTAGATACATCCGTATATAGACAAATCAAAGACAGAATTTTGGGACAGAGGGCGTACTTAATATTTTAGCGTTGGCACCCCAGTATTGTATTGAACAGAATTGACATTCTCTTGATCTCCTCTGACCA | |||||||||
gi|222362142|gb|GH723989.1|GH723989 G468.100A19F010614 G468 Triticum aestivum cDNA clone G468100A19, mRNA sequence TAGATACATCCGTATCTAGA EST sequence (targeted fragment marked with yellow): CCACGCGTCGCCCACGCGTCGCGAGGAAACTGGAAATTATCTGGATGAGGTTCTAGTTTCGATCGAAGGCACTTCTTCACAAGTTCAGACCGCGCATCAACTCATACAGGAGGTCCTACTGGGCGACGGAAAAGTTCTACCACCCAGGAGCAGCAGCTACGGCAACCCAGAGGCTGGCCCGGTCAGGCCGCCGTTCGCCCCGCGCGGCGCTGCTCCGGCGAGTCCGGAGTACGCCCCGCCTCTGTACCGCGACTACCGGTCGTTGTCCGGGAGCGTCCGCCACTGCCACTCTGCTGCTTACCACGGGTACAGGCTGTAGCACGCGGAGCCGAGCGACTGACCGCGCGCCTATCCTCCTCATCGCCGCGCCTAACCTAACGATCACCACCCGGACCATGCCCGATTAAGCAGGAATTGAATGGAACGGCTTTGCCGTGACGATTGATCGTTTTGGGGGACGTGATAGTTTCCAATGCCGGCTTGTGATGTACTCCCTCTATTCCGAATTACTTGTCTCGGATATGGATGTATCTAGAACTAACATACATCTAGATACATCCATTTCTACGACAAGTAATT | |||||||||
gi|222362143|gb|GH723990.1|GH723990 G468.100A19R010928 G468 Triticum aestivum cDNA clone G468100A19, mRNA sequence TAGATACATCCGTATCTAGA EST sequence (targeted fragment marked with yellow): AGAGAGAGAGAGACCATCGCCGTCGTCGCCGCTCCCCATTCACCGGAGCAGTCTGGAAGCTCATCGCAGAGGACGAGTGCATGAGCATCGCCGCCCCCACCCTACCAGAATGGTGGCACCGGCTTGCCTGGGTTACAAGAAGGGGGAATGAACCAGCCAGGTAGAAGAGCAGGGTCGAAGACAGCGTTGGGCTGACACTAAAACATGCAGTCAAGGAGGCGTTCGGTTGCCATCTACAGCATTTACTCCCTCCGTTCGGAATTACTTGTCGTAGAAATGGATGTATCTAGATGTATGTTAGTTCTAGATACATCCATATCCGAGACAAGTAATTCGGAATAGAGGGAGTACATCACAAGCCGGCATGGAAACTATCACGTCCCCCAAAACGATCAATCGTCACGGCAAAGCCGTTCCATTCAATTCCTGCTTAATCGGGCATGGTCCGGGTGGTGATCGTTAGGTTAGGCGCGGCGATGAGGAGGATAGGCGCGCGGTCAGTCGCTCGGCTCCGCGTGCTACAGCCTGTAC | |||||||||
gi|222371550|gb|GH732242.1|GH732242 OV.105C11F010202 OV Triticum aestivum cDNA clone OV105C11, mRNA sequence TAGATACATCCGTATCTAGA EST sequence (targeted fragment marked with yellow): CTGTTGTATCTCTTTTGCAGTGTATGTATGTTTATTGTTTTTATGAGGTCTACCATGGAGAGATCCATTGTGGATCAATTGCCAGGTTGGACGTTTTACATCTTAAGAGACGTCAAGATTATGTTTATGGGAATTAATGCTGATGAGTATGCCCCATGTTTCAGAGCTGAGTGAGACCTACTCCCTCCGTTCCTAAATGTAAGTCTTTTTAGAGATTCCATTACAAACTACATACGGATGTATATAGACATCTTTTAAAGTGTAGATTCACTCATTTTGCTTCGTATGTAGTCTATAGTGGAATATCTAAAAAGACTTATATTTAGTAATGGAGGGAGTATATGAGAGTGAAGTGGTCAGAGCCACGGTGACTAATAATGGTTACAACTATGGGTGGTGGTAAGAGTCGGAAATATTTATACTAATATATTTGTATATGTAGGGTATATCGATTGTAATCTTTCTGGTAAATTTTGTGTGAATAAGTATATTATTGACAGTAAAATTCAGCAAACTGAGGCCACAATTTAGTTAGTTGGGTCAGGCGAAGAACATATGGCGGTACCAATTAATTAAATCGATCAAAGTGAGATCTTTAACATACCATGAAGTACAAGAATGGGAAGAGTGATGATATTGGTAGAGCTGCAAGTTTAAAGGAGATATTGTCAATATATTGCAAGAAACATGGCCTATCATGACTAATACGTGTGAGCTCG | |||||||||