| mature miRNA: TAGTACAAAATTGAGTCATCT species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|222370333|gb|GH731455.1|GH731455 GR45.122H14F010720 GR45 Triticum aestivum cDNA clone GR45122H14, mRNA sequence TAGTACAAAATTGAGTCATCT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCTCCAGTTATATGGTTTGGAGTTTTTGGGGCTGAGGTGCACTACAACTCGATATATCCAGAAGGAGAGTTGCCCGTCGTGGAGAACAGAAAGAAGAGGTGGTGGCACTGGGAGTTCTAGACTTGTAGTGCTAAAACCAAAAGGGGAATAGAAGATTTGATTTGTTCTTTTGATCTCATGGCAGCTTGTTGGATCGACGGTCGTTTTGTTCGACCATGTGATTACGAGGGATCCGAGGAGCTGCGATGCCGTAGGATCGATGAGGAGATTGACTGACAGTTCGTTTGTACATAAGTACTCCCTCTGTTCCAAAATAGATGACTCAATTTTATACTAACTTTAGTACAAAGTTGGGTCATCTATTTTGGAACGGAGGGAGTATATAGCAGTATCTGCAGGGACGAAAGTGTTGACTGGGTCTGTGATATGTGATGTGAACATTTGTTGTAGTACCTAAT | |||||||||
gi|143800094|gb|CJ966015.1|CJ966015 CJ966015 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul3m20 TAGTACAAAATTGAGTCATCT EST sequence (targeted fragment marked with yellow): TGGTTTGGCTTCCTACAAGTTTAGCAACTCAGTCTGGTCCTCAACTGATGGTGATTGGAAACTGGCTAGCTGCTTAAGGCAAGCTGCTGCCGATTGGCTGAGAGACAGCCGTGCCGGCCATCCAGATTATCAGTTCTTTGTCTCCCATGGTGCATACAACAGGTAGTGACACCAAATCTGTGCTTTCTGCAGAGCTCATGAAAGAATGTCCGAAGAGTGTCTTGTGAACATGATTAAGTTCTGAGTGACTGACTGGTTGACTCCTTCCAAATCTGATGCATGTTACCACAAGATTTGAAGCTTGGATGGTGAGAAGTAACCTGTCCTGCTTTGTAAATTGCACTAATAGGTAGATTTCGACCGTCATGTTTTTGTACTTGTAGTCGGTTGGTCTGTGGGAAGCTGGGACGAGAATGAAAAAAAGGAAAAAGAAAAGAGAAATGAAAAAAGGTGGTGAAAAAGCTTGCACTTCAGATGTAGTTTGAGCTGTTCAACTTATGTAATACAAATAGTATGGGGACAAATTTTGATGAAAACACCCCTCATTGTCTGTACACATATCAAGTGTTGCTGGCATTGGAGTATGTGTTGAAGAAAACTTATACTTCCTCCCAAAATAAGTGTCTCAATTTTGTACTAAAGTTAGTATAAAGTTGACACTTATTTTAGACGGAGGGAGTAGTTAGCCATATGTTGTCCATAGTGTACCATGTAAACCCCGTGAACCTGAC | |||||||||
gi|222362578|gb|GH724963.1|GH724963 F1.102D24R010702 F1 Triticum aestivum cDNA clone F1102D24, mRNA sequence TAGTACAAAATTGAGTCATCT EST sequence (targeted fragment marked with yellow): GGAAAAATTGGGGTCTCTTTCCTCCTTCTTCTTCTTCCTCCTCAAATTATGCCATGGCTATAGTGTACATAGTTATGCGCAAAATAGACGTGTGTTTTTCCCAAGTTTCACAGAGACTTCGCCGGCAGCAAAGCCGCGCGGACAAAACAAACTACAGAAAAGTTTCCCACGAAACGCACCATGGGTAACACAGAGGCACGAACAACATGTACTCCCTCCGGTTCCAAAATAGATGACCCAATTTCGTACTAACTTGGTACTAAAGTTAGTATAAAGTTGAGTCATCTATTTGGGAACAGAGGGAGTATGCTTCACAACCACAACAAAAACACTTATAGAGGGGGTATCTCTGCAGCAGAAGAACCCCTTTCCCAGGAAATCCATTACTTGACTTACACATCTACGAGATGGGACGGCAGAGCCTTTATAACAACCATTAATCCGGAAGCTTCAGGTGATGCCCCATGGCTACAAGTTGACCGCAGACACAAGGGTTAAGAACTCGGGAGCAGATCCTGGATGTCCTTCCCCGAAGCTAAAGGGGAATTGGTTGGCGCGTAAGGCTCAAAAACGCCCCTCTTTGCCCCAAGATTTGGGAAATCCCATAATTAGCCCCAAAAATGTGCTTGGGAGACCTCAAACGTGTTTACGGTTACAATGTACCGTGGCAACCCTGTGAAAAGGGCACGCGCCTAACCGGCCCCACTAGCACTCCCTTATACCGTCCCCCAGTGTTGTGTG | |||||||||
gi|177815248|gb|FF339658.1|FF339658 PST_C14 Transcript derived fragments (TDFs) from wheat leaves inoculated by stripe rust fung TAGTACAAAATTGAGTCATCT EST sequence (targeted fragment marked with yellow): GCTTGCATGCCTGCAGGTCGACGATTTGTAGACTGCGTACCGACAACAAACATAACAAGAGGATCAAAGTAAACAAAATATCATGCAACGAAGACCAGTATAATTATTACTTCCTCCGTCTTAAATTAAGTGACTCAATTTTATACTAACTATAATATAAAGTTAGTATAAAATTAAGTTACTTATTTTGAAATGAAGGGAGTATTAGCTTCGGTTCTCGCGGCATCTTCAGACTTCAGTGCTGAGCTCCAAGACTCGCAACATCGCGTCAACGATGGACTTCAGTTACTCAGGACTCATCGGTACGCAGTCTACAA | |||||||||